RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 ZNF792Q3KQV3 632 aa7.63□□□□□ -1.19
PRPF40A-210ENST00000489741 WDR78Q5VTH9 848 aa7.63□□□□□ -1.19
PRPF40A-210ENST00000489741 SLC6A19Q695T7 634 aa7.63□□□□□ -1.19
PRPF40A-210ENST00000489741 FAM109BQ6ICB4 259 aaPredicted RBP7.63□□□□□ -1.19
PRPF40A-210ENST00000489741 CTR9Q6PD62 1173 aa7.63□□□□□ -1.19
PRPF40A-210ENST00000489741 CBLL1Q75N03 491 aa7.63□□□□□ -1.19
PRPF40A-210ENST00000489741 DPP9Q86TI2 863 aa7.63□□□□□ -1.19
PRPF40A-210ENST00000489741 DEFB123Q8N688 67 aa7.63□□□□□ -1.19
PRPF40A-210ENST00000489741 GOLM1Q8NBJ4 401 aa7.63□□□□□ -1.19
PRPF40A-210ENST00000489741 SLC17A8Q8NDX2 589 aa7.63□□□□□ -1.19
PRPF40A-210ENST00000489741 REPS2Q8NFH8 660 aa7.63□□□□□ -1.19
PRPF40A-210ENST00000489741 RIN3Q8TB24 985 aa7.63□□□□□ -1.19
PRPF40A-210ENST00000489741 ASB11Q8WXH4 323 aa7.63□□□□□ -1.19
PRPF40A-210ENST00000489741 ATG4CQ96DT6 458 aa7.63□□□□□ -1.19
PRPF40A-210ENST00000489741 PUS7LQ9H0K6 701 aaKnown RBP7.63□□□□□ -1.19
PRPF40A-210ENST00000489741 CORINQ9Y5Q5 1042 aa7.63□□□□□ -1.19
PRPF40A-210ENST00000489741 CDK5RAP2Q96SN8 1893 aa7.63□□□□□ -1.19
PRPF40A-210ENST00000489741 MYO5AQ9Y4I1 1855 aaKnown RBP7.63□□□□□ -1.19
PRPF40A-210ENST00000489741 FAM221AA4D161 298 aa7.62□□□□□ -1.19
PRPF40A-210ENST00000489741 WDR46O15213 610 aaKnown RBP7.62□□□□□ -1.19
PRPF40A-210ENST00000489741 SLC25A27O95847 323 aa7.62□□□□□ -1.19
PRPF40A-210ENST00000489741 CBX7O95931 251 aa7.62□□□□□ -1.19
PRPF40A-210ENST00000489741 EEF2P13639 858 aaKnown RBP7.62□□□□□ -1.19
PRPF40A-210ENST00000489741 CNGA1P29973 690 aa7.62□□□□□ -1.19
PRPF40A-210ENST00000489741 MFAP1P55081 439 aaKnown RBP7.62□□□□□ -1.19
PRPF40A-210ENST00000489741 ICA1Q05084 483 aa7.62□□□□□ -1.19
PRPF40A-210ENST00000489741 MRPL58Q14197 206 aaKnown RBP7.62□□□□□ -1.19
PRPF40A-210ENST00000489741 SBK1Q52WX2 424 aa7.62□□□□□ -1.19
PRPF40A-210ENST00000489741 PRAMEF19Q5SWL8 479 aa7.62□□□□□ -1.19
PRPF40A-210ENST00000489741 CDKAL1Q5VV42 579 aa7.62□□□□□ -1.19
PRPF40A-210ENST00000489741 SLC39A5Q6ZMH5 540 aa7.62□□□□□ -1.19
PRPF40A-210ENST00000489741 Q7L0L9 218 aa7.62□□□□□ -1.19
PRPF40A-210ENST00000489741 MCATQ8IVS2 390 aaKnown RBP7.62□□□□□ -1.19
PRPF40A-210ENST00000489741 SPICE1Q8N0Z3 855 aa7.62□□□□□ -1.19
PRPF40A-210ENST00000489741 ARRDC4Q8NCT1 418 aa7.62□□□□□ -1.19
PRPF40A-210ENST00000489741 PI4K2BQ8TCG2 481 aa7.62□□□□□ -1.19
PRPF40A-210ENST00000489741 MAML3Q96JK9 1138 aa7.62□□□□□ -1.19
PRPF40A-210ENST00000489741 STRBPQ96SI9 672 aaKnown RBP7.62□□□□□ -1.19
PRPF40A-210ENST00000489741 TANGO6Q9C0B7 1094 aa7.62□□□□□ -1.19
PRPF40A-210ENST00000489741 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.62□□□□□ -1.192e-8■□□□□ 8.2
PRPF40A-210ENST00000489741 SH2D4AQ9H788 454 aa7.62□□□□□ -1.19
PRPF40A-210ENST00000489741 KANSL2Q9H9L4 492 aa7.62□□□□□ -1.19
PRPF40A-210ENST00000489741 CWC22Q9HCG8 908 aaKnown RBP7.62□□□□□ -1.19
PRPF40A-210ENST00000489741 NRBP1Q9UHY1 535 aa7.62□□□□□ -1.19
PRPF40A-210ENST00000489741 STXBP5LQ9Y2K9 1186 aa7.62□□□□□ -1.19
PRPF40A-210ENST00000489741 DIS3Q9Y2L1 958 aaKnown RBP7.62□□□□□ -1.19
PRPF40A-210ENST00000489741 CDH23Q9H251 3354 aa7.62□□□□□ -1.19
PRPF40A-210ENST00000489741 DDX60LQ5H9U9 1706 aaKnown RBP7.61□□□□□ -1.19
PRPF40A-210ENST00000489741 GSG1L2A8MUP6 293 aa7.61□□□□□ -1.19
PRPF40A-210ENST00000489741 PRR33A8MZF0 331 aa7.61□□□□□ -1.19
PRPF40A-210ENST00000489741 VWA5AO00534 786 aa7.61□□□□□ -1.19
PRPF40A-210ENST00000489741 FLOT1O75955 427 aa7.61□□□□□ -1.19
PRPF40A-210ENST00000489741 FCER1AP12319 257 aa7.61□□□□□ -1.19
PRPF40A-210ENST00000489741 STAT3P40763 770 aa7.61□□□□□ -1.19
PRPF40A-210ENST00000489741 YARSP54577 528 aaKnown RBP7.61□□□□□ -1.19
PRPF40A-210ENST00000489741 RTP1P59025 263 aa7.61□□□□□ -1.19
PRPF40A-210ENST00000489741 LRRC41Q15345 812 aa7.61□□□□□ -1.19
PRPF40A-210ENST00000489741 GJC2Q5T442 439 aaPredicted RBP7.61□□□□□ -1.19
PRPF40A-210ENST00000489741 C20orf194Q5TEA3 1177 aa7.61□□□□□ -1.19
PRPF40A-210ENST00000489741 GIMAP6Q6P9H5 292 aa7.61□□□□□ -1.19
PRPF40A-210ENST00000489741 C22orf34Q6ZV56 151 aa7.61□□□□□ -1.19
PRPF40A-210ENST00000489741 ERMP1Q7Z2K6 904 aa7.61□□□□□ -1.19
PRPF40A-210ENST00000489741 CDH24Q86UP0 819 aa7.61□□□□□ -1.19
PRPF40A-210ENST00000489741 RIOX2Q8IUF8 465 aa7.61□□□□□ -1.19
PRPF40A-210ENST00000489741 FAM13CQ8NE31 585 aa7.61□□□□□ -1.19
PRPF40A-210ENST00000489741 OSBP2Q969R2 916 aa7.61□□□□□ -1.19
PRPF40A-210ENST00000489741 ACSF2Q96CM8 615 aaPredicted RBP7.61□□□□□ -1.19
PRPF40A-210ENST00000489741 LRRCC1Q9C099 1032 aa7.61□□□□□ -1.19
PRPF40A-210ENST00000489741 CHMP4BQ9H444 224 aaKnown RBP7.61□□□□□ -1.19
PRPF40A-210ENST00000489741 FBXO28Q9NVF7 368 aa7.61□□□□□ -1.19
PRPF40A-210ENST00000489741 SLC5A4Q9NY91 659 aa7.61□□□□□ -1.19
PRPF40A-210ENST00000489741 NYAP2Q9P242 653 aa7.61□□□□□ -1.19
PRPF40A-210ENST00000489741 GGT7Q9UJ14 662 aa7.61□□□□□ -1.19
PRPF40A-210ENST00000489741 ZNF214Q9UL59 606 aaPredicted RBP7.61□□□□□ -1.19
PRPF40A-210ENST00000489741 SLC4A4Q9Y6R1 1079 aa7.61□□□□□ -1.19
PRPF40A-210ENST00000489741 EYSQ5T1H1 3165 aa7.61□□□□□ -1.19
PRPF40A-210ENST00000489741 PRUNE2Q8WUY3 3088 aa7.61□□□□□ -1.19
PRPF40A-210ENST00000489741 SPTBN5Q9NRC6 3674 aaKnown RBP7.6□□□□□ -1.19
PRPF40A-210ENST00000489741 MYH1P12882 1939 aa7.6□□□□□ -1.19
PRPF40A-210ENST00000489741 RLFQ13129 1914 aa7.6□□□□□ -1.19
PRPF40A-210ENST00000489741 IGKV6D-41A0A0C4DH26 115 aa7.6□□□□□ -1.19
PRPF40A-210ENST00000489741 SMARCA5O60264 1052 aaPredicted RBP7.6□□□□□ -1.19
PRPF40A-210ENST00000489741 ZNF865P0CJ78 1059 aaPredicted RBP7.6□□□□□ -1.19
PRPF40A-210ENST00000489741 ZNF16P17020 682 aaPredicted RBP7.6□□□□□ -1.19
PRPF40A-210ENST00000489741 ETV3P41162 512 aa7.6□□□□□ -1.19
PRPF40A-210ENST00000489741 ZSCAN25Q6NSZ9 544 aa7.6□□□□□ -1.19
PRPF40A-210ENST00000489741 HS2ST1Q7LGA3 356 aa7.6□□□□□ -1.19
PRPF40A-210ENST00000489741 MKL1Q969V6 931 aa7.6□□□□□ -1.19
PRPF40A-210ENST00000489741 COX4I2Q96KJ9 171 aa7.6□□□□□ -1.19
PRPF40A-210ENST00000489741 HSPA12BQ96MM6 686 aa7.6□□□□□ -1.19
PRPF40A-210ENST00000489741 TINF2Q9BSI4 451 aa7.6□□□□□ -1.19
PRPF40A-210ENST00000489741 DCTPP1Q9H773 170 aa7.6□□□□□ -1.19
PRPF40A-210ENST00000489741 RC3H2Q9HBD1 1191 aaKnown RBP7.6□□□□□ -1.19
PRPF40A-210ENST00000489741 RCAN3Q9UKA8 241 aa7.6□□□□□ -1.19
PRPF40A-210ENST00000489741 DNAJC25-GNG10A0A024R161 153 aa7.59□□□□□ -1.19
PRPF40A-210ENST00000489741 TRIM43BA6NCK2 446 aa7.59□□□□□ -1.19
PRPF40A-210ENST00000489741 ATP2A1O14983 1001 aa7.59□□□□□ -1.19
PRPF40A-210ENST00000489741 TLR3O15455 904 aaKnown RBP7.59□□□□□ -1.19
PRPF40A-210ENST00000489741 PGK2P07205 417 aa7.59□□□□□ -1.19
PRPF40A-210ENST00000489741 ADCYAP1R1P41586 468 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms