RNA–Protein interactions for RNA: ENST00000489676.1

TFF3-203, Transcript of trefoil factor 3, humanhuman

TSL 2

Gene TFF3, Length 419 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-203ENST00000489676 ARHGAP28Q9P2N2 729 aa12.06□□□□□ -0.48
TFF3-203ENST00000489676 SEL1LQ9UBV2 794 aa12.06□□□□□ -0.48
TFF3-203ENST00000489676 HOOK1Q9UJC3 728 aaKnown RBP12.06□□□□□ -0.48
TFF3-203ENST00000489676 TBX21Q9UL17 535 aa12.06□□□□□ -0.48
TFF3-203ENST00000489676 CAND2O75155 1236 aa12.05□□□□□ -0.48
TFF3-203ENST00000489676 PPP1R37O75864 691 aa12.05□□□□□ -0.48
TFF3-203ENST00000489676 RPLP2P05387 115 aaKnown RBP12.05□□□□□ -0.48
TFF3-203ENST00000489676 IDEP14735 1019 aa12.05□□□□□ -0.48
TFF3-203ENST00000489676 NPTX2P47972 431 aa12.05□□□□□ -0.48
TFF3-203ENST00000489676 DNM2P50570 870 aa12.05□□□□□ -0.48
TFF3-203ENST00000489676 MRPS6P82932 125 aaKnown RBP12.05□□□□□ -0.48
TFF3-203ENST00000489676 KMT5BQ4FZB7 885 aa12.05□□□□□ -0.48
TFF3-203ENST00000489676 FAM26DQ5JW98 314 aa12.05□□□□□ -0.48
TFF3-203ENST00000489676 ODR4Q5SWX8 454 aa12.05□□□□□ -0.48
TFF3-203ENST00000489676 ZNF410Q86VK4 478 aa12.05□□□□□ -0.48
TFF3-203ENST00000489676 IFNLR1Q8IU57 520 aaPredicted RBP12.05□□□□□ -0.48
TFF3-203ENST00000489676 KSR1Q8IVT5 923 aa12.05□□□□□ -0.48
TFF3-203ENST00000489676 CCDC65Q8IXS2 484 aa12.05□□□□□ -0.48
TFF3-203ENST00000489676 NME8Q8N427 588 aa12.05□□□□□ -0.48
TFF3-203ENST00000489676 KIAA0895Q8NCT3 520 aa12.05□□□□□ -0.48
TFF3-203ENST00000489676 SMARCE1Q969G3 411 aa12.05□□□□□ -0.48
TFF3-203ENST00000489676 NTPCRQ9BSD7 190 aaKnown RBP12.05□□□□□ -0.48
TFF3-203ENST00000489676 KIFC3Q9BVG8 833 aa12.05□□□□□ -0.48
TFF3-203ENST00000489676 STRA6Q9BX79 667 aa12.05□□□□□ -0.48
TFF3-203ENST00000489676 NFKBIZQ9BYH8 718 aa12.05□□□□□ -0.48
TFF3-203ENST00000489676 ST6GALNAC4Q9H4F1 302 aa12.05□□□□□ -0.48
TFF3-203ENST00000489676 IFT122Q9HBG6 1241 aa12.05□□□□□ -0.48
TFF3-203ENST00000489676 EXOC1Q9NV70 894 aa12.05□□□□□ -0.48
TFF3-203ENST00000489676 LARSQ9P2J5 1176 aaKnown RBP12.05□□□□□ -0.48
TFF3-203ENST00000489676 AKT3Q9Y243 479 aa12.05□□□□□ -0.48
TFF3-203ENST00000489676 LTBP2Q14767 1821 aa12.04□□□□□ -0.48
TFF3-203ENST00000489676 DCDC2CA8MYV0 355 aa12.04□□□□□ -0.48
TFF3-203ENST00000489676 PITPNM1O00562 1244 aa12.04□□□□□ -0.48
TFF3-203ENST00000489676 TLR3O15455 904 aaKnown RBP12.04□□□□□ -0.48
TFF3-203ENST00000489676 ASAP2O43150 1006 aa12.04□□□□□ -0.48
TFF3-203ENST00000489676 SMC2O95347 1197 aa12.04□□□□□ -0.48
TFF3-203ENST00000489676 MAPTP10636 758 aaKnown RBP12.04□□□□□ -0.48
TFF3-203ENST00000489676 CKBP12277 381 aa12.04□□□□□ -0.48
TFF3-203ENST00000489676 BMP6P22004 513 aa12.04□□□□□ -0.48
TFF3-203ENST00000489676 CASP5P51878 434 aa12.04□□□□□ -0.48
TFF3-203ENST00000489676 PEX3P56589 373 aa12.04□□□□□ -0.48
TFF3-203ENST00000489676 PTENP60484 403 aa12.04□□□□□ -0.48
TFF3-203ENST00000489676 POU5F1BQ06416 359 aa12.04□□□□□ -0.48
TFF3-203ENST00000489676 DMP1Q13316 513 aaPredicted RBP12.04□□□□□ -0.48
TFF3-203ENST00000489676 MORC3Q14149 939 aa12.04□□□□□ -0.48
TFF3-203ENST00000489676 PPP2R5AQ15172 486 aa12.04□□□□□ -0.48
TFF3-203ENST00000489676 KIZQ2M2Z5 673 aa12.04□□□□□ -0.48
TFF3-203ENST00000489676 HERC4Q5GLZ8 1057 aaPredicted RBP12.04□□□□□ -0.48
TFF3-203ENST00000489676 HABP4Q5JVS0 413 aaKnown RBP12.04□□□□□ -0.48
TFF3-203ENST00000489676 FAM26FQ5R3K3 315 aa12.04□□□□□ -0.48
TFF3-203ENST00000489676 EPM2AIP1Q7L775 607 aaPredicted RBP12.04□□□□□ -0.48
TFF3-203ENST00000489676 TAS1R3Q7RTX0 852 aa12.04□□□□□ -0.48
TFF3-203ENST00000489676 RHPN2Q8IUC4 686 aa12.04□□□□□ -0.48
TFF3-203ENST00000489676 ZNF710Q8N1W2 664 aa12.04□□□□□ -0.48
TFF3-203ENST00000489676 RNF149Q8NC42 400 aa12.04□□□□□ -0.48
TFF3-203ENST00000489676 TMEM161BQ8NDZ6 487 aa12.04□□□□□ -0.48
TFF3-203ENST00000489676 GLIS3Q8NEA6 775 aa12.04□□□□□ -0.48
TFF3-203ENST00000489676 CAGE1Q8TC20 777 aa12.04□□□□□ -0.48
TFF3-203ENST00000489676 HPS3Q969F9 1004 aa12.04□□□□□ -0.48
TFF3-203ENST00000489676 SYAP1Q96A49 352 aaPredicted RBP12.04□□□□□ -0.48
TFF3-203ENST00000489676 NOC4LQ9BVI4 516 aaKnown RBP12.04□□□□□ -0.48
TFF3-203ENST00000489676 CCDC113Q9H0I3 377 aa12.04□□□□□ -0.48
TFF3-203ENST00000489676 MAN1B1Q9UKM7 699 aa12.04□□□□□ -0.48
TFF3-203ENST00000489676 NOD1Q9Y239 953 aa12.04□□□□□ -0.48
TFF3-203ENST00000489676 ATP11BQ9Y2G3 1177 aa12.04□□□□□ -0.48
TFF3-203ENST00000489676 A0A087WZ62 844 aa12.03□□□□□ -0.48
TFF3-203ENST00000489676 LRRIQ4A6NIV6 560 aa12.03□□□□□ -0.48
TFF3-203ENST00000489676 CHRNA1P02708 482 aa12.03□□□□□ -0.48
TFF3-203ENST00000489676 CLTBP09497 229 aa12.03□□□□□ -0.48
TFF3-203ENST00000489676 NLRP11P59045 1033 aaKnown RBP12.03□□□□□ -0.48
TFF3-203ENST00000489676 TMEM62Q0P6H9 643 aa12.03□□□□□ -0.48
TFF3-203ENST00000489676 STK4Q13043 487 aa12.03□□□□□ -0.48
TFF3-203ENST00000489676 MBTPS1Q14703 1052 aa12.03□□□□□ -0.48
TFF3-203ENST00000489676 COBLL1Q53SF7 1204 aa12.03□□□□□ -0.48
TFF3-203ENST00000489676 ZNF618Q5T7W0 954 aa12.03□□□□□ -0.48
TFF3-203ENST00000489676 RSPH3Q86UC2 560 aa12.03□□□□□ -0.48
TFF3-203ENST00000489676 FAM178BQ8IXR5 827 aa12.03□□□□□ -0.48
TFF3-203ENST00000489676 MYCT1Q8N699 235 aa12.03□□□□□ -0.48
TFF3-203ENST00000489676 TRIML1Q8N9V2 468 aa12.03□□□□□ -0.48
TFF3-203ENST00000489676 TMEM40Q8WWA1 233 aa12.03□□□□□ -0.48
TFF3-203ENST00000489676 ZNF668Q96K58 619 aaPredicted RBP12.03□□□□□ -0.48
TFF3-203ENST00000489676 IFT74Q96LB3 600 aa12.03□□□□□ -0.48
TFF3-203ENST00000489676 NLRP4Q96MN2 994 aa12.03□□□□□ -0.48
TFF3-203ENST00000489676 PPP1R16BQ96T49 567 aa12.03□□□□□ -0.48
TFF3-203ENST00000489676 FDXACB1Q9BRP7 624 aaPredicted RBP12.03□□□□□ -0.48
TFF3-203ENST00000489676 OSBPL7Q9BZF2 842 aa12.03□□□□□ -0.48
TFF3-203ENST00000489676 WNT8AQ9H1J5 351 aa12.03□□□□□ -0.48
TFF3-203ENST00000489676 MINDY3Q9H8M7 445 aa12.03□□□□□ -0.48
TFF3-203ENST00000489676 CDHR5Q9HBB8 845 aa12.03□□□□□ -0.48
TFF3-203ENST00000489676 RMND1Q9NWS8 449 aa12.03□□□□□ -0.48
TFF3-203ENST00000489676 TRPV2Q9Y5S1 764 aa12.03□□□□□ -0.48
TFF3-203ENST00000489676 CDY2AQ9Y6F7 541 aa12.03□□□□□ -0.48
TFF3-203ENST00000489676 UMODL1Q5DID0 1318 aa12.03□□□□□ -0.48
TFF3-203ENST00000489676 PHLPP2Q6ZVD8 1323 aa12.03□□□□□ -0.48
TFF3-203ENST00000489676 ZMYM2Q9UBW7 1377 aa12.03□□□□□ -0.48
TFF3-203ENST00000489676 K7ENM7 598 aa12.02□□□□□ -0.49
TFF3-203ENST00000489676 KIAA0355O15063 1070 aa12.02□□□□□ -0.49
TFF3-203ENST00000489676 EIF3DO15371 548 aaKnown RBP eCLIP12.02□□□□□ -0.49
TFF3-203ENST00000489676 SLC16A4O15374 487 aa12.02□□□□□ -0.49
TFF3-203ENST00000489676 EDN1P05305 212 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms