RNA–Protein interactions for RNA: ENST00000489629.1

CPSF3-205, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 3

Gene CPSF3, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-205ENST00000489629 GCDHQ92947 438 aaPredicted RBP4.65□□□□□ -1.67
CPSF3-205ENST00000489629 DYDC2Q96IM9 177 aa4.65□□□□□ -1.67
CPSF3-205ENST00000489629 PIF1Q9H611 641 aa4.65□□□□□ -1.67
CPSF3-205ENST00000489629 OXSMQ9NWU1 459 aa4.65□□□□□ -1.67
CPSF3-205ENST00000489629 MAGEC2Q9UBF1 373 aaPredicted RBP4.65□□□□□ -1.67
CPSF3-205ENST00000489629 DNAI1Q9UI46 699 aa4.65□□□□□ -1.67
CPSF3-205ENST00000489629 A0A0A6YYK5 440 aaPredicted RBP4.64□□□□□ -1.67
CPSF3-205ENST00000489629 UBE2QL1A1L167 161 aa4.64□□□□□ -1.67
CPSF3-205ENST00000489629 HNRNPLP14866 589 aaKnown RBP eCLIP4.64□□□□□ -1.67
CPSF3-205ENST00000489629 POU3F2P20265 443 aaPredicted RBP4.64□□□□□ -1.67
CPSF3-205ENST00000489629 SCNN1GP51170 649 aa4.64□□□□□ -1.67
CPSF3-205ENST00000489629 TGFB2P61812 414 aa4.64□□□□□ -1.67
CPSF3-205ENST00000489629 DSG1Q02413 1049 aa4.64□□□□□ -1.67
CPSF3-205ENST00000489629 ADCY2Q08462 1091 aa4.64□□□□□ -1.67
CPSF3-205ENST00000489629 FAM111BQ6SJ93 734 aa4.64□□□□□ -1.67
CPSF3-205ENST00000489629 UNQ6494/PRO21346Q6UXR6 183 aa4.64□□□□□ -1.67
CPSF3-205ENST00000489629 Q6ZRM9 215 aa4.64□□□□□ -1.67
CPSF3-205ENST00000489629 KIF18BQ86Y91 864 aa4.64□□□□□ -1.67
CPSF3-205ENST00000489629 PHYKPLQ8IUZ5 450 aa4.64□□□□□ -1.67
CPSF3-205ENST00000489629 SYNPOQ8N3V7 929 aa4.64□□□□□ -1.67
CPSF3-205ENST00000489629 RPGRQ92834 1020 aaKnown RBP4.64□□□□□ -1.67
CPSF3-205ENST00000489629 MIEF2Q96C03 454 aa4.64□□□□□ -1.67
CPSF3-205ENST00000489629 RNPC3Q96LT9 517 aaKnown RBP4.64□□□□□ -1.67
CPSF3-205ENST00000489629 WDR92Q96MX6 357 aa4.64□□□□□ -1.67
CPSF3-205ENST00000489629 SOX7Q9BT81 388 aa4.64□□□□□ -1.67
CPSF3-205ENST00000489629 MTFR1LQ9H019 292 aa4.64□□□□□ -1.67
CPSF3-205ENST00000489629 ZMAT4Q9H898 229 aa4.64□□□□□ -1.67
CPSF3-205ENST00000489629 H2AFY2Q9P0M6 372 aaPredicted RBP4.64□□□□□ -1.67
CPSF3-205ENST00000489629 TOX4O94842 621 aa4.63□□□□□ -1.67
CPSF3-205ENST00000489629 PRPF6O94906 941 aaKnown RBP4.63□□□□□ -1.67
CPSF3-205ENST00000489629 PEX11BO96011 259 aa4.63□□□□□ -1.67
CPSF3-205ENST00000489629 SLC25A3Q00325 362 aa4.63□□□□□ -1.67
CPSF3-205ENST00000489629 DPTQ07507 201 aa4.63□□□□□ -1.67
CPSF3-205ENST00000489629 KIAA1841Q6NSI8 718 aa4.63□□□□□ -1.67
CPSF3-205ENST00000489629 PPP1R14CQ8TAE6 165 aa4.63□□□□□ -1.67
CPSF3-205ENST00000489629 RTF1Q92541 710 aaKnown RBP4.63□□□□□ -1.67
CPSF3-205ENST00000489629 DRC1Q96MC2 740 aa4.63□□□□□ -1.67
CPSF3-205ENST00000489629 MYL10Q9BUA6 226 aa4.63□□□□□ -1.67
CPSF3-205ENST00000489629 OSBPL6Q9BZF3 934 aa4.63□□□□□ -1.67
CPSF3-205ENST00000489629 TRIM8Q9BZR9 551 aa4.63□□□□□ -1.67
CPSF3-205ENST00000489629 MMRN2Q9H8L6 949 aa4.63□□□□□ -1.67
CPSF3-205ENST00000489629 IL23AQ9NPF7 189 aa4.63□□□□□ -1.67
CPSF3-205ENST00000489629 OVOL3O00110 214 aa4.62□□□□□ -1.67
CPSF3-205ENST00000489629 ELL2O00472 640 aaPredicted RBP4.62□□□□□ -1.67
CPSF3-205ENST00000489629 OPHN1O60890 802 aa4.62□□□□□ -1.67
CPSF3-205ENST00000489629 F2P00734 622 aa4.62□□□□□ -1.67
CPSF3-205ENST00000489629 JUNP05412 331 aaKnown RBP4.62□□□□□ -1.67
CPSF3-205ENST00000489629 KIR2DL3P43628 341 aa4.62□□□□□ -1.67
CPSF3-205ENST00000489629 RABGGTBP53611 331 aa4.62□□□□□ -1.67
CPSF3-205ENST00000489629 PURAQ00577 322 aaKnown RBP4.62□□□□□ -1.67
CPSF3-205ENST00000489629 TCEA2Q15560 299 aa4.62□□□□□ -1.67
CPSF3-205ENST00000489629 CRB2Q5IJ48 1285 aa4.62□□□□□ -1.67
CPSF3-205ENST00000489629 HTR3DQ70Z44 454 aa4.62□□□□□ -1.67
CPSF3-205ENST00000489629 ZZZ3Q8IYH5 903 aa4.62□□□□□ -1.67
CPSF3-205ENST00000489629 NXPE1Q8N323 547 aa4.62□□□□□ -1.67
CPSF3-205ENST00000489629 C7orf31Q8N865 590 aa4.62□□□□□ -1.67
CPSF3-205ENST00000489629 ZNF483Q8TF39 744 aaPredicted RBP4.62□□□□□ -1.67
CPSF3-205ENST00000489629 UBXN4Q92575 508 aa4.62□□□□□ -1.67
CPSF3-205ENST00000489629 LARP4BQ92615 738 aaKnown RBP4.62□□□□□ -1.67
CPSF3-205ENST00000489629 CHFRQ96EP1 664 aa4.62□□□□□ -1.67
CPSF3-205ENST00000489629 TCF25Q9BQ70 676 aa4.62□□□□□ -1.67
CPSF3-205ENST00000489629 POFUT1Q9H488 388 aa4.62□□□□□ -1.67
CPSF3-205ENST00000489629 MTG2Q9H4K7 406 aa4.62□□□□□ -1.67
CPSF3-205ENST00000489629 TOMM22Q9NS69 142 aa4.62□□□□□ -1.67
CPSF3-205ENST00000489629 PARPBPQ9NWS1 579 aa4.62□□□□□ -1.67
CPSF3-205ENST00000489629 CD2APQ9Y5K6 639 aa4.62□□□□□ -1.67
CPSF3-205ENST00000489629 KLRG2A4D1S0 409 aaPredicted RBP4.61□□□□□ -1.67
CPSF3-205ENST00000489629 GOLGA8BA8MQT2 603 aa4.61□□□□□ -1.67
CPSF3-205ENST00000489629 ZNF891A8MT65 544 aaPredicted RBP4.61□□□□□ -1.67
CPSF3-205ENST00000489629 DAPK3O43293 454 aa4.61□□□□□ -1.67
CPSF3-205ENST00000489629 MTSS1O43312 755 aa4.61□□□□□ -1.67
CPSF3-205ENST00000489629 TGM5O43548 720 aa4.61□□□□□ -1.67
CPSF3-205ENST00000489629 SMAD3P84022 425 aaKnown RBP4.61□□□□□ -1.67
CPSF3-205ENST00000489629 CRHR2Q13324 411 aa4.61□□□□□ -1.67
CPSF3-205ENST00000489629 TOB2Q14106 344 aaPredicted RBP4.61□□□□□ -1.67
CPSF3-205ENST00000489629 LRRC32Q14392 662 aa4.61□□□□□ -1.67
CPSF3-205ENST00000489629 ELAVL1Q15717 326 aaKnown RBP4.61□□□□□ -1.67
CPSF3-205ENST00000489629 C21orf62-AS1Q17RA5 79 aa4.61□□□□□ -1.67
CPSF3-205ENST00000489629 TKFCQ3LXA3 575 aa4.61□□□□□ -1.67
CPSF3-205ENST00000489629 FKBP15Q5T1M5 1219 aa4.61□□□□□ -1.67
CPSF3-205ENST00000489629 C1QL3Q5VWW1 255 aa4.61□□□□□ -1.67
CPSF3-205ENST00000489629 TIGD7Q6NT04 549 aaPredicted RBP4.61□□□□□ -1.67
CPSF3-205ENST00000489629 ZNF627Q7L945 461 aa4.61□□□□□ -1.67
CPSF3-205ENST00000489629 LDLRAD3Q86YD5 345 aa4.61□□□□□ -1.67
CPSF3-205ENST00000489629 CMTM4Q8IZR5 234 aa4.61□□□□□ -1.67
CPSF3-205ENST00000489629 EFHBQ8N7U6 833 aa4.61□□□□□ -1.67
CPSF3-205ENST00000489629 CHTF18Q8WVB6 975 aa4.61□□□□□ -1.67
CPSF3-205ENST00000489629 NEU4Q8WWR8 484 aaPredicted RBP4.61□□□□□ -1.67
CPSF3-205ENST00000489629 IKZF4Q9H2S9 585 aa4.61□□□□□ -1.67
CPSF3-205ENST00000489629 C14orf93Q9H972 538 aaKnown RBP4.61□□□□□ -1.67
CPSF3-205ENST00000489629 SLC2A4RGQ9NR83 387 aa4.61□□□□□ -1.67
CPSF3-205ENST00000489629 ZKSCAN5Q9Y2L8 839 aa4.61□□□□□ -1.67
CPSF3-205ENST00000489629 XDHP47989 1333 aa4.61□□□□□ -1.67
CPSF3-205ENST00000489629 KPNA6O60684 536 aa4.6□□□□□ -1.67
CPSF3-205ENST00000489629 MAKP20794 623 aa4.6□□□□□ -1.67
CPSF3-205ENST00000489629 MAN2A2P49641 1150 aa4.6□□□□□ -1.67
CPSF3-205ENST00000489629 KRTAP5-3Q6L8H2 238 aa4.6□□□□□ -1.67
CPSF3-205ENST00000489629 Q6ZPA2 131 aa4.6□□□□□ -1.67
CPSF3-205ENST00000489629 LRRTM3Q86VH5 581 aa4.6□□□□□ -1.67
CPSF3-205ENST00000489629 NINJ1Q92982 152 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms