RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 CHRNB1P11230 501 aa8.88□□□□□ -0.99
EXOSC3-206ENST00000489414 GNAT1P11488 350 aa8.88□□□□□ -0.99
EXOSC3-206ENST00000489414 BMP3P12645 472 aa8.88□□□□□ -0.99
EXOSC3-206ENST00000489414 SEMA3FQ13275 785 aa8.88□□□□□ -0.99
EXOSC3-206ENST00000489414 LAMC2Q13753 1193 aa8.88□□□□□ -0.99
EXOSC3-206ENST00000489414 HIST2H2BCQ6DN03 193 aa8.88□□□□□ -0.99
EXOSC3-206ENST00000489414 SEPT14Q6ZU15 432 aa8.88□□□□□ -0.99
EXOSC3-206ENST00000489414 MTSS1LQ765P7 747 aa8.88□□□□□ -0.99
EXOSC3-206ENST00000489414 VPS52Q8N1B4 723 aa8.88□□□□□ -0.99
EXOSC3-206ENST00000489414 DNERQ8NFT8 737 aa8.88□□□□□ -0.99
EXOSC3-206ENST00000489414 ZNF707Q96C28 371 aaPredicted RBP8.88□□□□□ -0.99
EXOSC3-206ENST00000489414 POM121Q96HA1 1249 aa8.88□□□□□ -0.99
EXOSC3-206ENST00000489414 RIOK1Q9BRS2 568 aaKnown RBP8.88□□□□□ -0.99
EXOSC3-206ENST00000489414 SETD4Q9NVD3 440 aa8.88□□□□□ -0.99
EXOSC3-206ENST00000489414 AKAP2Q9Y2D5 859 aa8.88□□□□□ -0.99
EXOSC3-206ENST00000489414 SUPT16HQ9Y5B9 1047 aaKnown RBP8.88□□□□□ -0.99
EXOSC3-206ENST00000489414 ZBED9Q6R2W3 1325 aa8.87□□□□□ -0.99
EXOSC3-206ENST00000489414 KAT6AQ92794 2004 aa8.87□□□□□ -0.99
EXOSC3-206ENST00000489414 CCDC163A0A0D9SF12 145 aa8.87□□□□□ -0.99
EXOSC3-206ENST00000489414 CCDC194A0A1B0GVG4 234 aa8.87□□□□□ -0.99
EXOSC3-206ENST00000489414 PTPDC1A2A3K4 754 aa8.87□□□□□ -0.99
EXOSC3-206ENST00000489414 CLEC18AA5D8T8 446 aa8.87□□□□□ -0.99
EXOSC3-206ENST00000489414 PATE3B3GLJ2 98 aa8.87□□□□□ -0.99
EXOSC3-206ENST00000489414 H3BRB1 525 aa8.87□□□□□ -0.99
EXOSC3-206ENST00000489414 MEFVO15553 781 aaPredicted RBP8.87□□□□□ -0.99
EXOSC3-206ENST00000489414 FTH1P19P0C7X4 201 aa8.87□□□□□ -0.99
EXOSC3-206ENST00000489414 EIF2S3P41091 472 aaKnown RBP8.87□□□□□ -0.99
EXOSC3-206ENST00000489414 CDK8P49336 464 aa8.87□□□□□ -0.99
EXOSC3-206ENST00000489414 STAT2P52630 851 aa8.87□□□□□ -0.99
EXOSC3-206ENST00000489414 IRX4P78413 519 aa8.87□□□□□ -0.99
EXOSC3-206ENST00000489414 PDXDC1Q6P996 788 aa8.87□□□□□ -0.99
EXOSC3-206ENST00000489414 CLEC18BQ6UXF7 455 aa8.87□□□□□ -0.99
EXOSC3-206ENST00000489414 PNPLA1Q8N8W4 532 aa8.87□□□□□ -0.99
EXOSC3-206ENST00000489414 CLEC18CQ8NCF0 446 aa8.87□□□□□ -0.99
EXOSC3-206ENST00000489414 SMG7Q92540 1137 aaKnown RBP8.87□□□□□ -0.99
EXOSC3-206ENST00000489414 DUSP15Q9H1R2 295 aaPredicted RBP8.87□□□□□ -0.99
EXOSC3-206ENST00000489414 ADAMTS10Q9H324 1103 aa8.87□□□□□ -0.99
EXOSC3-206ENST00000489414 TMX1Q9H3N1 280 aa8.87□□□□□ -0.99
EXOSC3-206ENST00000489414 TUT1Q9H6E5 874 aaKnown RBP8.87□□□□□ -0.99
EXOSC3-206ENST00000489414 MAN1C1Q9NR34 630 aa8.87□□□□□ -0.99
EXOSC3-206ENST00000489414 NYAP2Q9P242 653 aa8.87□□□□□ -0.99
EXOSC3-206ENST00000489414 SQORQ9Y6N5 450 aa8.87□□□□□ -0.99
EXOSC3-206ENST00000489414 NID2Q14112 1375 aa8.86□□□□□ -0.99
EXOSC3-206ENST00000489414 TRABD2BA6NFA1 517 aa8.86□□□□□ -0.99
EXOSC3-206ENST00000489414 UQCRFS1P1P0C7P4 283 aa8.86□□□□□ -0.99
EXOSC3-206ENST00000489414 FGFR1P11362 822 aa8.86□□□□□ -0.99
EXOSC3-206ENST00000489414 IBSPP21815 317 aaPredicted RBP8.86□□□□□ -0.99
EXOSC3-206ENST00000489414 CALML3P27482 149 aa8.86□□□□□ -0.99
EXOSC3-206ENST00000489414 RHDQ02161 417 aa8.86□□□□□ -0.99
EXOSC3-206ENST00000489414 PTGDRQ13258 359 aa8.86□□□□□ -0.99
EXOSC3-206ENST00000489414 HNRNPDQ14103 355 aaKnown RBP8.86□□□□□ -0.99
EXOSC3-206ENST00000489414 HSDL1Q3SXM5 330 aa8.86□□□□□ -0.99
EXOSC3-206ENST00000489414 CCDC184Q52MB2 194 aa8.86□□□□□ -0.99
EXOSC3-206ENST00000489414 LMBR1Q8WVP7 490 aa8.86□□□□□ -0.99
EXOSC3-206ENST00000489414 PHKBQ93100 1093 aa8.86□□□□□ -0.99
EXOSC3-206ENST00000489414 NEUROD6Q96NK8 337 aa8.86□□□□□ -0.99
EXOSC3-206ENST00000489414 PHF20Q9BVI0 1012 aa8.86□□□□□ -0.99
EXOSC3-206ENST00000489414 DCP1AQ9NPI6 582 aaPredicted RBP8.86□□□□□ -0.99
EXOSC3-206ENST00000489414 PIH1D3Q9NQM4 214 aaKnown RBP8.86□□□□□ -0.99
EXOSC3-206ENST00000489414 CCPG1Q9ULG6 757 aa8.86□□□□□ -0.99
EXOSC3-206ENST00000489414 PADI3Q9ULW8 664 aa8.86□□□□□ -0.99
EXOSC3-206ENST00000489414 PA2G4Q9UQ80 394 aaKnown RBP8.86□□□□□ -0.99
EXOSC3-206ENST00000489414 MAN2B2Q9Y2E5 1009 aa8.86□□□□□ -0.99
EXOSC3-206ENST00000489414 CDY2AQ9Y6F7 541 aa8.86□□□□□ -0.99
EXOSC3-206ENST00000489414 TMEM232C9JQI7 657 aa8.85□□□□□ -0.99
EXOSC3-206ENST00000489414 RFPL2O75678 378 aa8.85□□□□□ -0.99
EXOSC3-206ENST00000489414 POLGP54098 1239 aaPredicted RBP8.85□□□□□ -0.99
EXOSC3-206ENST00000489414 CAMK2BQ13554 666 aa8.85□□□□□ -0.99
EXOSC3-206ENST00000489414 ARSIQ5FYB1 569 aa8.85□□□□□ -0.99
EXOSC3-206ENST00000489414 GORABQ5T7V8 394 aa8.85□□□□□ -0.99
EXOSC3-206ENST00000489414 TAF2Q6P1X5 1199 aa8.85□□□□□ -0.99
EXOSC3-206ENST00000489414 LRRC69Q6ZNQ3 347 aa8.85□□□□□ -0.99
EXOSC3-206ENST00000489414 C16orf86Q6ZW13 317 aa8.85□□□□□ -0.99
EXOSC3-206ENST00000489414 TMPRSS7Q7RTY8 843 aa8.85□□□□□ -0.99
EXOSC3-206ENST00000489414 TMC8Q8IU68 726 aa8.85□□□□□ -0.99
EXOSC3-206ENST00000489414 LRRC43Q8N309 656 aa8.85□□□□□ -0.99
EXOSC3-206ENST00000489414 FAM3CQ92520 227 aa8.85□□□□□ -0.99
EXOSC3-206ENST00000489414 DNASE1L2Q92874 299 aa8.85□□□□□ -0.99
EXOSC3-206ENST00000489414 MED8Q96G25 268 aa8.85□□□□□ -0.99
EXOSC3-206ENST00000489414 CASD1Q96PB1 797 aa8.85□□□□□ -0.99
EXOSC3-206ENST00000489414 KXD1Q9BQD3 176 aa8.85□□□□□ -0.99
EXOSC3-206ENST00000489414 CDH7Q9ULB5 785 aa8.85□□□□□ -0.99
EXOSC3-206ENST00000489414 BAZ2AQ9UIF9 1905 aaKnown RBP8.85□□□□□ -0.99
EXOSC3-206ENST00000489414 CELSR2Q9HCU4 2923 aa8.85□□□□□ -0.99
EXOSC3-206ENST00000489414 PDZD2O15018 2839 aa8.85□□□□□ -0.99
EXOSC3-206ENST00000489414 PI4KAP42356 2102 aa8.84□□□□□ -0.99
EXOSC3-206ENST00000489414 CRYBG3Q68DQ2 2970 aa8.84□□□□□ -0.99
EXOSC3-206ENST00000489414 B4DLN1 442 aa8.84□□□□□ -0.99
EXOSC3-206ENST00000489414 MGEA5O60502 916 aa8.84□□□□□ -0.99
EXOSC3-206ENST00000489414 ICAM1P05362 532 aa8.84□□□□□ -0.99
EXOSC3-206ENST00000489414 CNPP09543 421 aaKnown RBP8.84□□□□□ -0.99
EXOSC3-206ENST00000489414 MYF5P13349 255 aa8.84□□□□□ -0.99
EXOSC3-206ENST00000489414 KLRC2P26717 231 aa8.84□□□□□ -0.99
EXOSC3-206ENST00000489414 MRPL12P52815 198 aaKnown RBP8.84□□□□□ -0.99
EXOSC3-206ENST00000489414 SNAP25P60880 206 aa8.84□□□□□ -0.99
EXOSC3-206ENST00000489414 RPS6P62753 249 aaKnown RBP8.84□□□□□ -0.99
EXOSC3-206ENST00000489414 TFCP2Q12800 502 aa8.84□□□□□ -0.99
EXOSC3-206ENST00000489414 LMAN2Q12907 356 aa8.84□□□□□ -0.99
EXOSC3-206ENST00000489414 ELF2Q15723 593 aa8.84□□□□□ -0.99
EXOSC3-206ENST00000489414 MYSM1Q5VVJ2 828 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms