RNA–Protein interactions for RNA: ENST00000489261.1

ITSN1-231, Transcript of intersectin 1, human

TSL 1 (best)

Gene ITSN1, Length 1,108 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITSN1-231	ENST00000489261	EIF4A3	P38919	411 aa	Known RBP	11.85	□□□□□ -0.51
ITSN1-231	ENST00000489261	ALDH5A1	P51649	535 aa	Predicted RBP	11.85	□□□□□ -0.51
ITSN1-231	ENST00000489261	ACTR2	P61160	394 aa		11.85	□□□□□ -0.51
ITSN1-231	ENST00000489261	POLR2F	P61218	127 aa	Known RBP	11.85	□□□□□ -0.51
ITSN1-231	ENST00000489261	HERVK_113	P62684	666 aa		11.85	□□□□□ -0.51
ITSN1-231	ENST00000489261	ASTE1	Q2TB18	679 aa	Predicted RBP	11.85	□□□□□ -0.51
ITSN1-231	ENST00000489261	TREML2	Q5T2D2	321 aa		11.85	□□□□□ -0.51
ITSN1-231	ENST00000489261	INTS8	Q75QN2	995 aa	Known RBP	11.85	□□□□□ -0.51
ITSN1-231	ENST00000489261	HAUS6	Q7Z4H7	955 aa		11.85	□□□□□ -0.51
ITSN1-231	ENST00000489261	IFNL1	Q8IU54	200 aa		11.85	□□□□□ -0.51
ITSN1-231	ENST00000489261	EXOC8	Q8IYI6	725 aa		11.85	□□□□□ -0.51
ITSN1-231	ENST00000489261	RNF10	Q8N5U6	811 aa	Known RBP	11.85	□□□□□ -0.51
ITSN1-231	ENST00000489261	SHCBP1	Q8NEM2	672 aa		11.85	□□□□□ -0.51
ITSN1-231	ENST00000489261	UBXN4	Q92575	508 aa		11.85	□□□□□ -0.51
ITSN1-231	ENST00000489261	SLC35C1	Q96A29	364 aa		11.85	□□□□□ -0.51
ITSN1-231	ENST00000489261	OPTN	Q96CV9	577 aa		11.85	□□□□□ -0.51
ITSN1-231	ENST00000489261	MS4A4A	Q96JQ5	239 aa		11.85	□□□□□ -0.51
ITSN1-231	ENST00000489261	CEP170P1	Q96L14	293 aa		11.85	□□□□□ -0.51
ITSN1-231	ENST00000489261	ASCC2	Q9H1I8	757 aa	Predicted RBP	11.85	□□□□□ -0.51
ITSN1-231	ENST00000489261	GAN	Q9H2C0	597 aa		11.85	□□□□□ -0.51
ITSN1-231	ENST00000489261	PDCL3	Q9H2J4	239 aa		11.85	□□□□□ -0.51
ITSN1-231	ENST00000489261	MROH8	Q9H579	483 aa		11.85	□□□□□ -0.51
ITSN1-231	ENST00000489261	NRBP2	Q9NSY0	501 aa		11.85	□□□□□ -0.51
ITSN1-231	ENST00000489261	BTBD7	Q9P203	1132 aa		11.85	□□□□□ -0.51
ITSN1-231	ENST00000489261	ARHGAP20	Q9P2F6	1191 aa		11.85	□□□□□ -0.51
ITSN1-231	ENST00000489261	CDC23	Q9UJX2	597 aa		11.85	□□□□□ -0.51
ITSN1-231	ENST00000489261	PCDHA13	Q9Y5I0	950 aa		11.85	□□□□□ -0.51
ITSN1-231	ENST00000489261	ATP8B3	O60423	1300 aa		11.85	□□□□□ -0.51
ITSN1-231	ENST00000489261	ZMYM2	Q9UBW7	1377 aa		11.84	□□□□□ -0.51
ITSN1-231	ENST00000489261	IGF2BP3	O00425	579 aa	Known RBP eCLIP	11.84	□□□□□ -0.51
ITSN1-231	ENST00000489261	EPHB6	O15197	1021 aa		11.84	□□□□□ -0.51
ITSN1-231	ENST00000489261	EXOC3	O60645	756 aa		11.84	□□□□□ -0.51
ITSN1-231	ENST00000489261	GFPT2	O94808	682 aa		11.84	□□□□□ -0.51
ITSN1-231	ENST00000489261	STBD1	O95210	358 aa		11.84	□□□□□ -0.51
ITSN1-231	ENST00000489261	TBC1D8	O95759	1140 aa		11.84	□□□□□ -0.51
ITSN1-231	ENST00000489261	ALDH1A1	P00352	501 aa		11.84	□□□□□ -0.51
ITSN1-231	ENST00000489261	PON1	P27169	355 aa		11.84	□□□□□ -0.51
ITSN1-231	ENST00000489261	MAGEA1	P43355	309 aa		11.84	□□□□□ -0.51
ITSN1-231	ENST00000489261	KIF11	P52732	1056 aa		11.84	□□□□□ -0.51
ITSN1-231	ENST00000489261	NCBP1	Q09161	790 aa	Known RBP	11.84	□□□□□ -0.51
ITSN1-231	ENST00000489261	KCNA1	Q09470	495 aa		11.84	□□□□□ -0.51
ITSN1-231	ENST00000489261	DMP1	Q13316	513 aa	Predicted RBP	11.84	□□□□□ -0.51
ITSN1-231	ENST00000489261	SNAPC2	Q13487	334 aa		11.84	□□□□□ -0.51
ITSN1-231	ENST00000489261	ASIC2	Q16515	512 aa		11.84	□□□□□ -0.51
ITSN1-231	ENST00000489261	UGCG	Q16739	394 aa		11.84	□□□□□ -0.51
ITSN1-231	ENST00000489261	WHAMMP3	Q1A5X7	153 aa		11.84	□□□□□ -0.51
ITSN1-231	ENST00000489261	FAM102B	Q5T8I3	360 aa		11.84	□□□□□ -0.51
ITSN1-231	ENST00000489261	TCERG1L	Q5VWI1	586 aa		11.84	□□□□□ -0.51
ITSN1-231	ENST00000489261	SWSAP1	Q6NVH7	229 aa		11.84	□□□□□ -0.51
ITSN1-231	ENST00000489261	ANO5	Q75V66	913 aa		11.84	□□□□□ -0.51
ITSN1-231	ENST00000489261	USP37	Q86T82	979 aa		11.84	□□□□□ -0.51
ITSN1-231	ENST00000489261	NCAPG2	Q86XI2	1143 aa		11.84	□□□□□ -0.51
ITSN1-231	ENST00000489261	SLC35F6	Q8N357	371 aa		11.84	□□□□□ -0.51
ITSN1-231	ENST00000489261	FAM133A	Q8N9E0	248 aa		11.84	□□□□□ -0.51
ITSN1-231	ENST00000489261	XXYLT1	Q8NBI6	393 aa		11.84	□□□□□ -0.51
ITSN1-231	ENST00000489261	CNKSR2	Q8WXI2	1034 aa		11.84	□□□□□ -0.51
ITSN1-231	ENST00000489261	OTUD5	Q96G74	571 aa		11.84	□□□□□ -0.51
ITSN1-231	ENST00000489261	IFT74	Q96LB3	600 aa		11.84	□□□□□ -0.51
ITSN1-231	ENST00000489261	PURB	Q96QR8	312 aa	Known RBP	11.84	□□□□□ -0.51
ITSN1-231	ENST00000489261	NIFK	Q9BYG3	293 aa	Known RBP	11.84	□□□□□ -0.51
ITSN1-231	ENST00000489261	PDLIM7	Q9NR12	457 aa		11.84	□□□□□ -0.51
ITSN1-231	ENST00000489261	PNMA3	Q9UL41	463 aa		11.84	□□□□□ -0.51
ITSN1-231	ENST00000489261	GUCA1B	Q9UMX6	200 aa		11.84	□□□□□ -0.51
ITSN1-231	ENST00000489261	SLC45A1	Q9Y2W3	748 aa		11.84	□□□□□ -0.51
ITSN1-231	ENST00000489261	MAFB	Q9Y5Q3	323 aa	Predicted RBP	11.84	□□□□□ -0.51
ITSN1-231	ENST00000489261	IGKV6D-21	A0A0A0MT36	114 aa		11.83	□□□□□ -0.52
ITSN1-231	ENST00000489261	ANO9	A1A5B4	782 aa		11.83	□□□□□ -0.52
ITSN1-231	ENST00000489261	KIAA0391	O15091	583 aa	Known RBP	11.83	□□□□□ -0.52
ITSN1-231	ENST00000489261	TACC1	O75410	805 aa		11.83	□□□□□ -0.52
ITSN1-231	ENST00000489261	TUBB	P07437	444 aa		11.83	□□□□□ -0.52
ITSN1-231	ENST00000489261	UCHL3	P15374	230 aa		11.83	□□□□□ -0.52
ITSN1-231	ENST00000489261	FER	P16591	822 aa		11.83	□□□□□ -0.52
ITSN1-231	ENST00000489261	PRKCI	P41743	596 aa		11.83	□□□□□ -0.52
ITSN1-231	ENST00000489261	FMO5	P49326	533 aa		11.83	□□□□□ -0.52
ITSN1-231	ENST00000489261	CASP4	P49662	377 aa		11.83	□□□□□ -0.52
ITSN1-231	ENST00000489261	PEX3	P56589	373 aa		11.83	□□□□□ -0.52
ITSN1-231	ENST00000489261	DCAF17	Q5H9S7	520 aa	Predicted RBP	11.83	□□□□□ -0.52
ITSN1-231	ENST00000489261	FAM160B1	Q5W0V3	765 aa		11.83	□□□□□ -0.52
ITSN1-231	ENST00000489261	HGSNAT	Q68CP4	663 aa		11.83	□□□□□ -0.52
ITSN1-231	ENST00000489261	DPY19L2P1	Q6NXN4	242 aa		11.83	□□□□□ -0.52
ITSN1-231	ENST00000489261	VPS36	Q86VN1	386 aa		11.83	□□□□□ -0.52
ITSN1-231	ENST00000489261	CCDC155	Q8N6L0	562 aa		11.83	□□□□□ -0.52
ITSN1-231	ENST00000489261	TRIM58	Q8NG06	486 aa		11.83	□□□□□ -0.52
ITSN1-231	ENST00000489261	ABHD8	Q96I13	439 aa		11.83	□□□□□ -0.52
ITSN1-231	ENST00000489261	SPAG5	Q96R06	1193 aa		11.83	□□□□□ -0.52
ITSN1-231	ENST00000489261	PTPN18	Q99952	460 aa		11.83	□□□□□ -0.52
ITSN1-231	ENST00000489261	IFIH1	Q9BYX4	1025 aa	Known RBP	11.83	□□□□□ -0.52
ITSN1-231	ENST00000489261	MCOLN1	Q9GZU1	580 aa		11.83	□□□□□ -0.52
ITSN1-231	ENST00000489261	ATP6V0A4	Q9HBG4	840 aa		11.83	□□□□□ -0.52
ITSN1-231	ENST00000489261	POLD4	Q9HCU8	107 aa		11.83	□□□□□ -0.52
ITSN1-231	ENST00000489261	NLRC4	Q9NPP4	1024 aa		11.83	□□□□□ -0.52
ITSN1-231	ENST00000489261	KMT5A	Q9NQR1	393 aa		11.83	□□□□□ -0.52
ITSN1-231	ENST00000489261	ZNF302	Q9NR11	478 aa		11.83	□□□□□ -0.52
ITSN1-231	ENST00000489261	CYP26B1	Q9NR63	512 aa		11.83	□□□□□ -0.52
ITSN1-231	ENST00000489261	TBX20	Q9UMR3	447 aa		11.83	□□□□□ -0.52
ITSN1-231	ENST00000489261	USP20	Q9Y2K6	914 aa		11.83	□□□□□ -0.52
ITSN1-231	ENST00000489261	IGSF9B	Q9UPX0	1349 aa		11.83	□□□□□ -0.52
ITSN1-231	ENST00000489261	COL11A1	P12107	1806 aa	Predicted RBP	11.82	□□□□□ -0.52
ITSN1-231	ENST00000489261	SOWAHB	A6NEL2	793 aa		11.82	□□□□□ -0.52
ITSN1-231	ENST00000489261	BTNL10	A8MVZ5	291 aa		11.82	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms