RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 SMCO2A6NFE2 343 aa18.33■□□□□ 0.52
USP48-210ENST00000489108 SPDYE4A6NLX3 237 aa18.33■□□□□ 0.52
USP48-210ENST00000489108 CSDE1O75534 798 aaKnown RBP18.33■□□□□ 0.52
USP48-210ENST00000489108 DARSP14868 501 aaKnown RBP18.33■□□□□ 0.52
USP48-210ENST00000489108 TMOD1P28289 359 aa18.33■□□□□ 0.52
USP48-210ENST00000489108 GPC3P51654 580 aa18.33■□□□□ 0.52
USP48-210ENST00000489108 LONRF3Q496Y0 759 aa18.33■□□□□ 0.52
USP48-210ENST00000489108 PPFIBP1Q86W92 1011 aa18.33■□□□□ 0.52
USP48-210ENST00000489108 LRRC2Q9BYS8 371 aa18.33■□□□□ 0.52
USP48-210ENST00000489108 NRDE2Q9H7Z3 1164 aa18.33■□□□□ 0.52
USP48-210ENST00000489108 SFXN1Q9H9B4 322 aa18.33■□□□□ 0.52
USP48-210ENST00000489108 GABBR1Q9UBS5 961 aa18.33■□□□□ 0.52
USP48-210ENST00000489108 WDR81Q562E7 1941 aa18.32■□□□□ 0.52
USP48-210ENST00000489108 IGLV3-22A0A075B6J6 115 aa18.32■□□□□ 0.52
USP48-210ENST00000489108 KRBA1A5PL33 1030 aa18.32■□□□□ 0.52
USP48-210ENST00000489108 PSAPP07602 524 aa18.32■□□□□ 0.52
USP48-210ENST00000489108 GALTP07902 379 aa18.32■□□□□ 0.52
USP48-210ENST00000489108 CFHP08603 1231 aa18.32■□□□□ 0.52
USP48-210ENST00000489108 CLK2P49760 499 aaKnown RBP18.32■□□□□ 0.52
USP48-210ENST00000489108 LETM2Q2VYF4 491 aa18.32■□□□□ 0.52
USP48-210ENST00000489108 ZNF746Q6NUN9 644 aaPredicted RBP18.32■□□□□ 0.52
USP48-210ENST00000489108 MICU3Q86XE3 530 aa18.32■□□□□ 0.52
USP48-210ENST00000489108 ZNF710Q8N1W2 664 aa18.32■□□□□ 0.52
USP48-210ENST00000489108 RSAD2Q8WXG1 361 aa18.32■□□□□ 0.52
USP48-210ENST00000489108 RIN2Q8WYP3 895 aaPredicted RBP18.32■□□□□ 0.52
USP48-210ENST00000489108 LPPQ93052 612 aa18.32■□□□□ 0.52
USP48-210ENST00000489108 SCLT1Q96NL6 688 aa18.32■□□□□ 0.52
USP48-210ENST00000489108 ZNF577Q9BSK1 485 aa18.32■□□□□ 0.52
USP48-210ENST00000489108 VN1R3Q9BXE9 311 aa18.32■□□□□ 0.52
USP48-210ENST00000489108 DACT1Q9NYF0 836 aa18.32■□□□□ 0.52
USP48-210ENST00000489108 IGSF9Q9P2J2 1179 aa18.32■□□□□ 0.52
USP48-210ENST00000489108 WNT16Q9UBV4 365 aa18.32■□□□□ 0.52
USP48-210ENST00000489108 PCDHA10Q9Y5I2 948 aa18.32■□□□□ 0.52
USP48-210ENST00000489108 V9GY48 417 aaPredicted RBP18.32■□□□□ 0.52
USP48-210ENST00000489108 DNAH14Q0VDD8 3507 aa18.32■□□□□ 0.52
USP48-210ENST00000489108 CNTNAP5Q8WYK1 1306 aa18.31■□□□□ 0.52
USP48-210ENST00000489108 KLRC2P26717 231 aa18.31■□□□□ 0.52
USP48-210ENST00000489108 AP3B2Q13367 1082 aa18.31■□□□□ 0.52
USP48-210ENST00000489108 PTPN14Q15678 1187 aa18.31■□□□□ 0.52
USP48-210ENST00000489108 JAKMIP3Q5VZ66 844 aa18.31■□□□□ 0.52
USP48-210ENST00000489108 PPP1R18Q6NYC8 613 aa18.31■□□□□ 0.52
USP48-210ENST00000489108 TEX2Q8IWB9 1127 aa18.31■□□□□ 0.52
USP48-210ENST00000489108 KLHL5Q96PQ7 755 aa18.31■□□□□ 0.52
USP48-210ENST00000489108 TBC1D22BQ9NU19 505 aa18.31■□□□□ 0.52
USP48-210ENST00000489108 TBC1D13Q9NVG8 400 aa18.31■□□□□ 0.52
USP48-210ENST00000489108 FRYLO94915 3013 aa18.3■□□□□ 0.52
USP48-210ENST00000489108 N4BP1O75113 896 aaKnown RBP18.3■□□□□ 0.52
USP48-210ENST00000489108 CNPP09543 421 aaKnown RBP18.3■□□□□ 0.52
USP48-210ENST00000489108 PHKA2P46019 1235 aa18.3■□□□□ 0.52
USP48-210ENST00000489108 CLCN4P51793 760 aa18.3■□□□□ 0.52
USP48-210ENST00000489108 PUM1Q14671 1186 aaKnown RBP eCLIP18.3■□□□□ 0.52
USP48-210ENST00000489108 SMAP1Q8IYB5 467 aaPredicted RBP18.3■□□□□ 0.52
USP48-210ENST00000489108 NLRP7Q8WX94 980 aa18.3■□□□□ 0.52
USP48-210ENST00000489108 NRBP2Q9NSY0 501 aa18.3■□□□□ 0.52
USP48-210ENST00000489108 DNAJB4Q9UDY4 337 aa18.3■□□□□ 0.52
USP48-210ENST00000489108 CA14Q9ULX7 337 aa18.3■□□□□ 0.52
USP48-210ENST00000489108 MEIS3P2A8K0S8 358 aa18.29■□□□□ 0.52
USP48-210ENST00000489108 ZNF862O60290 1169 aa18.29■□□□□ 0.52
USP48-210ENST00000489108 SSBP05455 408 aaKnown RBP eCLIP18.29■□□□□ 0.52
USP48-210ENST00000489108 CYP3A4P08684 503 aa18.29■□□□□ 0.52
USP48-210ENST00000489108 RFX1P22670 979 aa18.29■□□□□ 0.52
USP48-210ENST00000489108 SLC11A1P49279 550 aa18.29■□□□□ 0.52
USP48-210ENST00000489108 FUT2Q10981 343 aa18.29■□□□□ 0.52
USP48-210ENST00000489108 NOMO2Q5JPE7 1267 aa18.29■□□□□ 0.52
USP48-210ENST00000489108 DCLK2Q8N568 766 aa18.29■□□□□ 0.52
USP48-210ENST00000489108 CRYGNQ8WXF5 182 aa18.29■□□□□ 0.52
USP48-210ENST00000489108 FAM167AQ96KS9 214 aa18.29■□□□□ 0.52
USP48-210ENST00000489108 HINFPQ9BQA5 517 aa18.29■□□□□ 0.52
USP48-210ENST00000489108 EMILIN2Q9BXX0 1053 aa18.29■□□□□ 0.52
USP48-210ENST00000489108 GBP3Q9H0R5 595 aa18.29■□□□□ 0.52
USP48-210ENST00000489108 CHST12Q9NRB3 414 aa18.29■□□□□ 0.52
USP48-210ENST00000489108 TCEAL9Q9UHQ7 104 aa18.29■□□□□ 0.52
USP48-210ENST00000489108 INPP5FQ9Y2H2 1132 aa18.29■□□□□ 0.52
USP48-210ENST00000489108 SAMM50Q9Y512 469 aa18.29■□□□□ 0.52
USP48-210ENST00000489108 CACNA1BQ00975 2339 aa18.28■□□□□ 0.52
USP48-210ENST00000489108 CARNS1A5YM72 827 aa18.28■□□□□ 0.52
USP48-210ENST00000489108 ADAMTS3O15072 1205 aa18.28■□□□□ 0.52
USP48-210ENST00000489108 B4GALT3O60512 393 aa18.28■□□□□ 0.52
USP48-210ENST00000489108 LILRB3O75022 631 aa18.28■□□□□ 0.52
USP48-210ENST00000489108 OFD1O75665 1012 aa18.28■□□□□ 0.52
USP48-210ENST00000489108 KRT37O76014 449 aa18.28■□□□□ 0.52
USP48-210ENST00000489108 OATP04181 439 aa18.28■□□□□ 0.52
USP48-210ENST00000489108 RNASELQ05823 741 aaKnown RBP18.28■□□□□ 0.52
USP48-210ENST00000489108 SPECC1Q5M775 1068 aa18.28■□□□□ 0.52
USP48-210ENST00000489108 GLB1LQ6UWU2 654 aa18.28■□□□□ 0.52
USP48-210ENST00000489108 SYNE3Q6ZMZ3 975 aa18.28■□□□□ 0.52
USP48-210ENST00000489108 C15orf39Q6ZRI6 1047 aa18.28■□□□□ 0.52
USP48-210ENST00000489108 SGMS1Q86VZ5 419 aa18.28■□□□□ 0.52
USP48-210ENST00000489108 ZNF280BQ86YH2 543 aa18.28■□□□□ 0.52
USP48-210ENST00000489108 SLC44A3Q8N4M1 653 aa18.28■□□□□ 0.52
USP48-210ENST00000489108 GLT8D2Q9H1C3 349 aa18.28■□□□□ 0.52
USP48-210ENST00000489108 TBC1D17Q9HA65 648 aa18.28■□□□□ 0.52
USP48-210ENST00000489108 BARHL2Q9NY43 387 aa18.28■□□□□ 0.52
USP48-210ENST00000489108 DCNP07585 359 aaKnown RBP18.27■□□□□ 0.52
USP48-210ENST00000489108 SP9P0CG40 484 aa18.27■□□□□ 0.52
USP48-210ENST00000489108 GBP2P32456 591 aaPredicted RBP18.27■□□□□ 0.52
USP48-210ENST00000489108 TBC1D8BQ0IIM8 1120 aa18.27■□□□□ 0.52
USP48-210ENST00000489108 DRP2Q13474 957 aa18.27■□□□□ 0.52
USP48-210ENST00000489108 TWF2Q6IBS0 349 aaKnown RBP18.27■□□□□ 0.52
USP48-210ENST00000489108 TRAIPQ9BWF2 469 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms