RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 DHX58Q96C10 678 aa17.68■□□□□ 0.42
HDAC7-224ENST00000488927 PPP1R16BQ96T49 567 aa17.68■□□□□ 0.42
HDAC7-224ENST00000488927 FDXACB1Q9BRP7 624 aaPredicted RBP17.68■□□□□ 0.42
HDAC7-224ENST00000488927 NFKBIZQ9BYH8 718 aa17.68■□□□□ 0.42
HDAC7-224ENST00000488927 GPRC5CQ9NQ84 441 aa17.68■□□□□ 0.42
HDAC7-224ENST00000488927 HPSEQ9Y251 543 aa17.68■□□□□ 0.42
HDAC7-224ENST00000488927 A0A1B0GVL5 298 aa17.67■□□□□ 0.42
HDAC7-224ENST00000488927 HIP1RO75146 1068 aa17.67■□□□□ 0.42
HDAC7-224ENST00000488927 SRGAP2CP0DJJ0 459 aa17.67■□□□□ 0.42
HDAC7-224ENST00000488927 ACRP10323 421 aa17.67■□□□□ 0.42
HDAC7-224ENST00000488927 SFPQP23246 707 aaKnown RBP eCLIP17.67■□□□□ 0.42
HDAC7-224ENST00000488927 GLRA2P23416 452 aa17.67■□□□□ 0.42
HDAC7-224ENST00000488927 NAMPTP43490 491 aa17.67■□□□□ 0.42
HDAC7-224ENST00000488927 DMP1Q13316 513 aaPredicted RBP17.67■□□□□ 0.42
HDAC7-224ENST00000488927 IKBKEQ14164 716 aa17.67■□□□□ 0.42
HDAC7-224ENST00000488927 DHX8Q14562 1220 aaKnown RBP17.67■□□□□ 0.42
HDAC7-224ENST00000488927 ARSHQ5FYA8 562 aa17.67■□□□□ 0.42
HDAC7-224ENST00000488927 TMEM240Q5SV17 173 aa17.67■□□□□ 0.42
HDAC7-224ENST00000488927 ZNF365Q70YC5 407 aa17.67■□□□□ 0.42
HDAC7-224ENST00000488927 IFNLR1Q8IU57 520 aaPredicted RBP17.67■□□□□ 0.42
HDAC7-224ENST00000488927 KSR1Q8IVT5 923 aa17.67■□□□□ 0.42
HDAC7-224ENST00000488927 FSIP1Q8NA03 581 aa17.67■□□□□ 0.42
HDAC7-224ENST00000488927 ASAP3Q8TDY4 903 aa17.67■□□□□ 0.42
HDAC7-224ENST00000488927 CCDC34Q96HJ3 373 aa17.67■□□□□ 0.42
HDAC7-224ENST00000488927 GBP4Q96PP9 640 aa17.67■□□□□ 0.42
HDAC7-224ENST00000488927 FTHL17Q9BXU8 183 aa17.67■□□□□ 0.42
HDAC7-224ENST00000488927 C2orf40Q9H1Z8 148 aa17.67■□□□□ 0.42
HDAC7-224ENST00000488927 CDHR5Q9HBB8 845 aa17.67■□□□□ 0.42
HDAC7-224ENST00000488927 PHLPP2Q6ZVD8 1323 aa17.67■□□□□ 0.42
HDAC7-224ENST00000488927 EVPLQ92817 2033 aa17.66■□□□□ 0.42
HDAC7-224ENST00000488927 ABHD14A-ACY1A0A1B0GW23 586 aa17.66■□□□□ 0.42
HDAC7-224ENST00000488927 A0A1W2PPC1 479 aa17.66■□□□□ 0.42
HDAC7-224ENST00000488927 TBCAO75347 108 aaKnown RBP17.66■□□□□ 0.42
HDAC7-224ENST00000488927 SLFN14P0C7P3 912 aa17.66■□□□□ 0.42
HDAC7-224ENST00000488927 SYKP43405 635 aa17.66■□□□□ 0.42
HDAC7-224ENST00000488927 EPHB4P54760 987 aa17.66■□□□□ 0.42
HDAC7-224ENST00000488927 PTENP60484 403 aa17.66■□□□□ 0.42
HDAC7-224ENST00000488927 CAPSQ13938 189 aa17.66■□□□□ 0.42
HDAC7-224ENST00000488927 CHRDL2Q6WN34 429 aa17.66■□□□□ 0.42
HDAC7-224ENST00000488927 C16orf59Q7L2K0 433 aa17.66■□□□□ 0.42
HDAC7-224ENST00000488927 ZBTB8OSQ8IWT0 167 aa17.66■□□□□ 0.42
HDAC7-224ENST00000488927 DBF4BQ8NFT6 615 aa17.66■□□□□ 0.42
HDAC7-224ENST00000488927 TMEM40Q8WWA1 233 aa17.66■□□□□ 0.42
HDAC7-224ENST00000488927 HERVK_113Q902F9 699 aa17.66■□□□□ 0.42
HDAC7-224ENST00000488927 VWCEQ96DN2 955 aa17.66■□□□□ 0.42
HDAC7-224ENST00000488927 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.66■□□□□ 0.425e-8■■■■■ 32.7
HDAC7-224ENST00000488927 IFT122Q9HBG6 1241 aa17.66■□□□□ 0.42
HDAC7-224ENST00000488927 KBTBD4Q9NVX7 518 aa17.66■□□□□ 0.42
HDAC7-224ENST00000488927 LARSQ9P2J5 1176 aaKnown RBP17.66■□□□□ 0.42
HDAC7-224ENST00000488927 PADI3Q9ULW8 664 aa17.66■□□□□ 0.42
HDAC7-224ENST00000488927 NOC2LQ9Y3T9 749 aaKnown RBP17.66■□□□□ 0.42
HDAC7-224ENST00000488927 CEP290O15078 2479 aa17.66■□□□□ 0.42
HDAC7-224ENST00000488927 TCHHQ07283 1943 aa17.65■□□□□ 0.42
HDAC7-224ENST00000488927 LRRIQ4A6NIV6 560 aa17.65■□□□□ 0.42
HDAC7-224ENST00000488927 PLS3P13797 630 aa17.65■□□□□ 0.42
HDAC7-224ENST00000488927 SCP2P22307 547 aa17.65■□□□□ 0.42
HDAC7-224ENST00000488927 CD52P31358 61 aa17.65■□□□□ 0.42
HDAC7-224ENST00000488927 NDUFA8P51970 172 aa17.65■□□□□ 0.42
HDAC7-224ENST00000488927 SMTNP53814 917 aa17.65■□□□□ 0.42
HDAC7-224ENST00000488927 DEPTORQ8TB45 409 aa17.65■□□□□ 0.42
HDAC7-224ENST00000488927 DDX12PQ92771 950 aa17.65■□□□□ 0.42
HDAC7-224ENST00000488927 REEP2Q9BRK0 252 aa17.65■□□□□ 0.42
HDAC7-224ENST00000488927 PRO3102Q9H379 93 aa17.65■□□□□ 0.42
HDAC7-224ENST00000488927 AGO3Q9H9G7 860 aaKnown RBP17.65■□□□□ 0.42
HDAC7-224ENST00000488927 PARVGQ9HBI0 331 aa17.65■□□□□ 0.42
HDAC7-224ENST00000488927 ST3GAL5Q9UNP4 418 aa17.65■□□□□ 0.42
HDAC7-224ENST00000488927 H0YCG3 227 aa17.64■□□□□ 0.41
HDAC7-224ENST00000488927 FAM13AO94988 1023 aa17.64■□□□□ 0.41
HDAC7-224ENST00000488927 MYL1P05976 194 aa17.64■□□□□ 0.41
HDAC7-224ENST00000488927 ZNF131P52739 623 aa17.64■□□□□ 0.41
HDAC7-224ENST00000488927 EFNA5P52803 228 aa17.64■□□□□ 0.41
HDAC7-224ENST00000488927 NCBP1Q09161 790 aaKnown RBP17.64■□□□□ 0.41
HDAC7-224ENST00000488927 RAD51AP2Q09MP3 1159 aa17.64■□□□□ 0.41
HDAC7-224ENST00000488927 NFX1Q12986 1120 aaKnown RBP17.64■□□□□ 0.41
HDAC7-224ENST00000488927 MAPK7Q13164 816 aa17.64■□□□□ 0.41
HDAC7-224ENST00000488927 GIT2Q14161 759 aa17.64■□□□□ 0.41
HDAC7-224ENST00000488927 CDCA2Q69YH5 1023 aaPredicted RBP17.64■□□□□ 0.41
HDAC7-224ENST00000488927 OTOP2Q7RTS6 562 aa17.64■□□□□ 0.41
HDAC7-224ENST00000488927 FAM228AQ86W67 206 aa17.64■□□□□ 0.41
HDAC7-224ENST00000488927 TDHQ8IZJ6 230 aa17.64■□□□□ 0.41
HDAC7-224ENST00000488927 DAW1Q8N136 415 aa17.64■□□□□ 0.41
HDAC7-224ENST00000488927 SLC17A8Q8NDX2 589 aa17.64■□□□□ 0.41
HDAC7-224ENST00000488927 SPIRE2Q8WWL2 714 aa17.64■□□□□ 0.41
HDAC7-224ENST00000488927 ZNF668Q96K58 619 aaPredicted RBP17.64■□□□□ 0.41
HDAC7-224ENST00000488927 ERVK-5Q9HDB9 667 aa17.64■□□□□ 0.41
HDAC7-224ENST00000488927 PCDH10Q9P2E7 1040 aa17.64■□□□□ 0.41
HDAC7-224ENST00000488927 MYMKA6NI61 221 aa17.63■□□□□ 0.41
HDAC7-224ENST00000488927 INO80B-WBP1J3KQ70 363 aa17.63■□□□□ 0.41
HDAC7-224ENST00000488927 ABCD1P33897 745 aa17.63■□□□□ 0.41
HDAC7-224ENST00000488927 KCNJ6P48051 423 aa17.63■□□□□ 0.41
HDAC7-224ENST00000488927 PEX3P56589 373 aa17.63■□□□□ 0.41
HDAC7-224ENST00000488927 KANK3Q6NY19 840 aa17.63■□□□□ 0.41
HDAC7-224ENST00000488927 CNNM4Q6P4Q7 775 aa17.63■□□□□ 0.41
HDAC7-224ENST00000488927 CATSPER4Q7RTX7 472 aa17.63■□□□□ 0.41
HDAC7-224ENST00000488927 BSNDQ8WZ55 320 aa17.63■□□□□ 0.41
HDAC7-224ENST00000488927 RNPC3Q96LT9 517 aaKnown RBP17.63■□□□□ 0.41
HDAC7-224ENST00000488927 PRIMPOLQ96LW4 560 aa17.63■□□□□ 0.41
HDAC7-224ENST00000488927 NTPCRQ9BSD7 190 aaKnown RBP17.63■□□□□ 0.41
HDAC7-224ENST00000488927 KMT5AQ9NQR1 393 aa17.63■□□□□ 0.41
HDAC7-224ENST00000488927 CHST12Q9NRB3 414 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms