RNA–Protein interactions for RNA: ENST00000488910.1

ATG3-205, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 681 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-205ENST00000488910 AAASQ9NRG9 546 aa19.5■□□□□ 0.71
ATG3-205ENST00000488910 XIRP2A4UGR9 3374 aa19.49■□□□□ 0.71
ATG3-205ENST00000488910 POTEMA6NI47 508 aa19.49■□□□□ 0.71
ATG3-205ENST00000488910 CSDE1O75534 798 aaKnown RBP19.49■□□□□ 0.71
ATG3-205ENST00000488910 DGAT1O75907 488 aa19.49■□□□□ 0.71
ATG3-205ENST00000488910 CD2BP2O95400 341 aaKnown RBP19.49■□□□□ 0.71
ATG3-205ENST00000488910 FGFR4P22455 802 aa19.49■□□□□ 0.71
ATG3-205ENST00000488910 TECP42680 631 aa19.49■□□□□ 0.71
ATG3-205ENST00000488910 GATMP50440 423 aa19.49■□□□□ 0.71
ATG3-205ENST00000488910 LAMTOR4Q0VGL1 99 aa19.49■□□□□ 0.71
ATG3-205ENST00000488910 MXD4Q14582 209 aaPredicted RBP19.49■□□□□ 0.71
ATG3-205ENST00000488910 SRGAP1Q7Z6B7 1085 aa19.49■□□□□ 0.71
ATG3-205ENST00000488910 ERMNQ8TAM6 284 aa19.49■□□□□ 0.71
ATG3-205ENST00000488910 MTRQ99707 1265 aa19.49■□□□□ 0.71
ATG3-205ENST00000488910 POLR3CQ9BUI4 534 aaPredicted RBP19.49■□□□□ 0.71
ATG3-205ENST00000488910 TRAIPQ9BWF2 469 aa19.49■□□□□ 0.71
ATG3-205ENST00000488910 TMEM117Q9H0C3 514 aa19.49■□□□□ 0.71
ATG3-205ENST00000488910 IFT122Q9HBG6 1241 aa19.49■□□□□ 0.71
ATG3-205ENST00000488910 PLAGL2Q9UPG8 496 aa19.49■□□□□ 0.71
ATG3-205ENST00000488910 FNDC1Q4ZHG4 1894 aaPredicted RBP19.49■□□□□ 0.71
ATG3-205ENST00000488910 CUL9Q8IWT3 2517 aa19.48■□□□□ 0.71
ATG3-205ENST00000488910 GRM6O15303 877 aa19.48■□□□□ 0.71
ATG3-205ENST00000488910 SRGAP2CP0DJJ0 459 aa19.48■□□□□ 0.71
ATG3-205ENST00000488910 SPATA31C1P0DKV0 1188 aa19.48■□□□□ 0.71
ATG3-205ENST00000488910 SKIP12755 728 aa19.48■□□□□ 0.71
ATG3-205ENST00000488910 FERMT3Q86UX7 667 aa19.48■□□□□ 0.71
ATG3-205ENST00000488910 C4orf32Q8N8J7 132 aa19.48■□□□□ 0.71
ATG3-205ENST00000488910 CCDC43Q96MW1 224 aaKnown RBP19.48■□□□□ 0.71
ATG3-205ENST00000488910 NSUN3Q9H649 340 aaKnown RBP19.48■□□□□ 0.71
ATG3-205ENST00000488910 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.48■□□□□ 0.71
ATG3-205ENST00000488910 PCDHB12Q9Y5F1 795 aa19.48■□□□□ 0.71
ATG3-205ENST00000488910 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.47■□□□□ 0.71
ATG3-205ENST00000488910 FGFR1P11362 822 aa19.47■□□□□ 0.71
ATG3-205ENST00000488910 RPA1P27694 616 aa19.47■□□□□ 0.71
ATG3-205ENST00000488910 RARRES1P49788 294 aa19.47■□□□□ 0.71
ATG3-205ENST00000488910 TFF2Q03403 129 aa19.47■□□□□ 0.71
ATG3-205ENST00000488910 POU5F1BQ06416 359 aa19.47■□□□□ 0.71
ATG3-205ENST00000488910 PCBP1Q15365 356 aaKnown RBP eCLIP19.47■□□□□ 0.71
ATG3-205ENST00000488910 CSPP1Q1MSJ5 1256 aa19.47■□□□□ 0.71
ATG3-205ENST00000488910 SPOUT1Q5T280 376 aaKnown RBP19.47■□□□□ 0.71
ATG3-205ENST00000488910 CATSPER4Q7RTX7 472 aa19.47■□□□□ 0.71
ATG3-205ENST00000488910 ZNF598Q86UK7 904 aaKnown RBP19.47■□□□□ 0.71
ATG3-205ENST00000488910 CATSPER3Q86XQ3 398 aa19.47■□□□□ 0.71
ATG3-205ENST00000488910 ABI1Q8IZP0 508 aa19.47■□□□□ 0.71
ATG3-205ENST00000488910 RSPH1Q8WYR4 309 aa19.47■□□□□ 0.71
ATG3-205ENST00000488910 NACC1Q96RE7 527 aa19.47■□□□□ 0.71
ATG3-205ENST00000488910 TYW1Q9NV66 732 aaKnown RBP19.47■□□□□ 0.71
ATG3-205ENST00000488910 NCK2O43639 380 aa19.46■□□□□ 0.71
ATG3-205ENST00000488910 BMP1P13497 986 aa19.46■□□□□ 0.71
ATG3-205ENST00000488910 MUTP22033 750 aa19.46■□□□□ 0.71
ATG3-205ENST00000488910 GJB2P29033 226 aa19.46■□□□□ 0.71
ATG3-205ENST00000488910 TOB1P50616 345 aaPredicted RBP19.46■□□□□ 0.71
ATG3-205ENST00000488910 FXR2P51116 673 aaKnown RBP eCLIP19.46■□□□□ 0.71
ATG3-205ENST00000488910 PDIA5Q14554 519 aa19.46■□□□□ 0.71
ATG3-205ENST00000488910 KLHL23Q8NBE8 558 aa19.46■□□□□ 0.71
ATG3-205ENST00000488910 SPPL3Q8TCT6 385 aa19.46■□□□□ 0.71
ATG3-205ENST00000488910 PIGOQ8TEQ8 1089 aa19.46■□□□□ 0.71
ATG3-205ENST00000488910 CASD1Q96PB1 797 aa19.46■□□□□ 0.71
ATG3-205ENST00000488910 ALG13Q9NP73 1137 aaKnown RBP19.46■□□□□ 0.71
ATG3-205ENST00000488910 XPNPEP1Q9NQW7 623 aa19.46■□□□□ 0.71
ATG3-205ENST00000488910 BMP2KQ9NSY1 1161 aaPredicted RBP19.46■□□□□ 0.71
ATG3-205ENST00000488910 RNF19AQ9NV58 838 aa19.46■□□□□ 0.71
ATG3-205ENST00000488910 DBR1Q9UK59 544 aaKnown RBP19.46■□□□□ 0.71
ATG3-205ENST00000488910 SMC3Q9UQE7 1217 aa19.46■□□□□ 0.71
ATG3-205ENST00000488910 PIN4Q9Y237 131 aaKnown RBP19.46■□□□□ 0.71
ATG3-205ENST00000488910 STK24Q9Y6E0 443 aa19.46■□□□□ 0.71
ATG3-205ENST00000488910 ARID2Q68CP9 1835 aa19.46■□□□□ 0.71
ATG3-205ENST00000488910 LAD1O00515 517 aa19.45■□□□□ 0.7
ATG3-205ENST00000488910 MED24O75448 989 aa19.45■□□□□ 0.7
ATG3-205ENST00000488910 ITGB1P05556 798 aa19.45■□□□□ 0.7
ATG3-205ENST00000488910 PHKA2P46019 1235 aa19.45■□□□□ 0.7
ATG3-205ENST00000488910 PTGDRQ13258 359 aa19.45■□□□□ 0.7
ATG3-205ENST00000488910 TFDP1Q14186 410 aa19.45■□□□□ 0.7
ATG3-205ENST00000488910 TCEAL5Q5H9L2 206 aa19.45■□□□□ 0.7
ATG3-205ENST00000488910 HAUS3Q68CZ6 603 aa19.45■□□□□ 0.7
ATG3-205ENST00000488910 MCTP1Q6DN14 999 aa19.45■□□□□ 0.7
ATG3-205ENST00000488910 TWF2Q6IBS0 349 aaKnown RBP19.45■□□□□ 0.7
ATG3-205ENST00000488910 RNF149Q8NC42 400 aa19.45■□□□□ 0.7
ATG3-205ENST00000488910 RNF169Q8NCN4 708 aa19.45■□□□□ 0.7
ATG3-205ENST00000488910 BACH2Q9BYV9 841 aa19.45■□□□□ 0.7
ATG3-205ENST00000488910 CWH43Q9H720 699 aa19.45■□□□□ 0.7
ATG3-205ENST00000488910 UBE2ZQ9H832 354 aaPredicted RBP19.45■□□□□ 0.7
ATG3-205ENST00000488910 AGPAT5Q9NUQ2 364 aa19.45■□□□□ 0.7
ATG3-205ENST00000488910 MYO7AQ13402 2215 aa19.45■□□□□ 0.7
ATG3-205ENST00000488910 H3BQV1 296 aa19.44■□□□□ 0.7
ATG3-205ENST00000488910 ZNF623O75123 536 aa19.44■□□□□ 0.7
ATG3-205ENST00000488910 LAG3P18627 525 aa19.44■□□□□ 0.7
ATG3-205ENST00000488910 ARL2P36404 184 aa19.44■□□□□ 0.7
ATG3-205ENST00000488910 RAB27AP51159 221 aa19.44■□□□□ 0.7
ATG3-205ENST00000488910 UBE3AQ05086 875 aa19.44■□□□□ 0.7
ATG3-205ENST00000488910 NBR1Q14596 966 aa19.44■□□□□ 0.7
ATG3-205ENST00000488910 RILPL1Q5EBL4 403 aa19.44■□□□□ 0.7
ATG3-205ENST00000488910 IFNLR1Q8IU57 520 aaPredicted RBP19.44■□□□□ 0.7
ATG3-205ENST00000488910 RAB34Q9BZG1 259 aa19.44■□□□□ 0.7
ATG3-205ENST00000488910 PCDHB6Q9Y5E3 794 aa19.44■□□□□ 0.7
ATG3-205ENST00000488910 KIAA1671Q9BY89 1806 aa19.44■□□□□ 0.7
ATG3-205ENST00000488910 BRWD1Q9NSI6 2320 aa19.43■□□□□ 0.7
ATG3-205ENST00000488910 A0A087WWV3 80 aa19.43■□□□□ 0.7
ATG3-205ENST00000488910 ATF7P17544 494 aaPredicted RBP19.43■□□□□ 0.7
ATG3-205ENST00000488910 AXLP30530 894 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms