RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 CPT1CQ8TCG5 803 aa4.46□□□□□ -1.7
CCDC93-209ENST00000488908 ST8SIA2Q92186 375 aa4.46□□□□□ -1.7
CCDC93-209ENST00000488908 FOXRED1Q96CU9 486 aaPredicted RBP4.46□□□□□ -1.7
CCDC93-209ENST00000488908 FAM193BQ96PV7 902 aaPredicted RBP4.46□□□□□ -1.7
CCDC93-209ENST00000488908 SORCS3Q9UPU3 1222 aa4.46□□□□□ -1.7
CCDC93-209ENST00000488908 COL4A3Q01955 1670 aa4.45□□□□□ -1.7
CCDC93-209ENST00000488908 KIAA0355O15063 1070 aa4.45□□□□□ -1.7
CCDC93-209ENST00000488908 PDPK1O15530 556 aa4.45□□□□□ -1.7
CCDC93-209ENST00000488908 DAPK3O43293 454 aa4.45□□□□□ -1.7
CCDC93-209ENST00000488908 EFCAB14O75071 495 aa4.45□□□□□ -1.7
CCDC93-209ENST00000488908 PRLP01236 227 aa4.45□□□□□ -1.7
CCDC93-209ENST00000488908 CDK4P11802 303 aa4.45□□□□□ -1.7
CCDC93-209ENST00000488908 ZNF37AP17032 561 aaPredicted RBP4.45□□□□□ -1.7
CCDC93-209ENST00000488908 NPEPPSP55786 919 aa4.45□□□□□ -1.7
CCDC93-209ENST00000488908 ANTXR2P58335 489 aa4.45□□□□□ -1.7
CCDC93-209ENST00000488908 SSRP1Q08945 709 aaKnown RBP4.45□□□□□ -1.7
CCDC93-209ENST00000488908 COLEC12Q5KU26 742 aa4.45□□□□□ -1.7
CCDC93-209ENST00000488908 FOXB2Q5VYV0 432 aa4.45□□□□□ -1.7
CCDC93-209ENST00000488908 OVCH1Q7RTY7 1134 aa4.45□□□□□ -1.7
CCDC93-209ENST00000488908 GLCCI1Q86VQ1 547 aa4.45□□□□□ -1.7
CCDC93-209ENST00000488908 WDR92Q96MX6 357 aa4.45□□□□□ -1.7
CCDC93-209ENST00000488908 DHRS4Q9BTZ2 278 aa4.45□□□□□ -1.7
CCDC93-209ENST00000488908 SYNPO2LQ9H987 977 aa4.45□□□□□ -1.7
CCDC93-209ENST00000488908 KCMF1Q9P0J7 381 aa4.45□□□□□ -1.7
CCDC93-209ENST00000488908 NCDNQ9UBB6 729 aa4.45□□□□□ -1.7
CCDC93-209ENST00000488908 TRIM24O15164 1050 aa4.44□□□□□ -1.7
CCDC93-209ENST00000488908 SCAF4O95104 1147 aaKnown RBP4.44□□□□□ -1.7
CCDC93-209ENST00000488908 RASGRP1O95267 797 aa4.44□□□□□ -1.7
CCDC93-209ENST00000488908 GYPEP15421 78 aa4.44□□□□□ -1.7
CCDC93-209ENST00000488908 LAG3P18627 525 aa4.44□□□□□ -1.7
CCDC93-209ENST00000488908 FNTBP49356 437 aa4.44□□□□□ -1.7
CCDC93-209ENST00000488908 RGS3P49796 1198 aa4.44□□□□□ -1.7
CCDC93-209ENST00000488908 IRF9Q00978 393 aa4.44□□□□□ -1.7
CCDC93-209ENST00000488908 SLC6A3Q01959 620 aa4.44□□□□□ -1.7
CCDC93-209ENST00000488908 SPIDRQ14159 915 aa4.44□□□□□ -1.7
CCDC93-209ENST00000488908 NBPF6Q5VWK0 638 aa4.44□□□□□ -1.7
CCDC93-209ENST00000488908 CC2D1AQ6P1N0 951 aaPredicted RBP4.44□□□□□ -1.7
CCDC93-209ENST00000488908 APBB1IPQ7Z5R6 666 aaPredicted RBP4.44□□□□□ -1.7
CCDC93-209ENST00000488908 CMTM4Q8IZR5 234 aa4.44□□□□□ -1.7
CCDC93-209ENST00000488908 BEND2Q8NDZ0 799 aa4.44□□□□□ -1.7
CCDC93-209ENST00000488908 DYDC2Q96IM9 177 aa4.44□□□□□ -1.7
CCDC93-209ENST00000488908 EXOC2Q96KP1 924 aa4.44□□□□□ -1.7
CCDC93-209ENST00000488908 C16orf92Q96LL3 132 aa4.44□□□□□ -1.7
CCDC93-209ENST00000488908 NBPF4Q96M43 638 aa4.44□□□□□ -1.7
CCDC93-209ENST00000488908 GMLQ99445 158 aa4.44□□□□□ -1.7
CCDC93-209ENST00000488908 C14orf93Q9H972 538 aaKnown RBP4.44□□□□□ -1.7
CCDC93-209ENST00000488908 POLR3BQ9NW08 1133 aaPredicted RBP4.44□□□□□ -1.7
CCDC93-209ENST00000488908 NDOR1Q9UHB4 597 aa4.44□□□□□ -1.7
CCDC93-209ENST00000488908 PFDN2Q9UHV9 154 aa4.44□□□□□ -1.7
CCDC93-209ENST00000488908 MSRB2Q9Y3D2 182 aa4.44□□□□□ -1.7
CCDC93-209ENST00000488908 MRPS23Q9Y3D9 190 aaKnown RBP4.44□□□□□ -1.7
CCDC93-209ENST00000488908 INO80B-WBP1J3KQ70 363 aa4.43□□□□□ -1.7
CCDC93-209ENST00000488908 HK1P19367 917 aa4.43□□□□□ -1.7
CCDC93-209ENST00000488908 USP14P54578 494 aa4.43□□□□□ -1.7
CCDC93-209ENST00000488908 RASGRF1Q13972 1273 aa4.43□□□□□ -1.7
CCDC93-209ENST00000488908 SLFN12LQ6IEE8 588 aa4.43□□□□□ -1.7
CCDC93-209ENST00000488908 RD3Q7Z3Z2 195 aa4.43□□□□□ -1.7
CCDC93-209ENST00000488908 C2orf69Q8N8R5 385 aa4.43□□□□□ -1.7
CCDC93-209ENST00000488908 SUPT20HQ8NEM7 779 aa4.43□□□□□ -1.7
CCDC93-209ENST00000488908 MAML3Q96JK9 1138 aa4.43□□□□□ -1.7
CCDC93-209ENST00000488908 MAGEB10Q96LZ2 347 aaPredicted RBP4.43□□□□□ -1.7
CCDC93-209ENST00000488908 INO80BQ9C086 356 aaPredicted RBP4.43□□□□□ -1.7
CCDC93-209ENST00000488908 SLC52A2Q9HAB3 445 aa4.43□□□□□ -1.7
CCDC93-209ENST00000488908 COX11Q9Y6N1 276 aa4.43□□□□□ -1.7
CCDC93-209ENST00000488908 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.42□□□□□ -1.7
CCDC93-209ENST00000488908 NPTXRO95502 500 aa4.42□□□□□ -1.7
CCDC93-209ENST00000488908 KIR2DL3P43628 341 aa4.42□□□□□ -1.7
CCDC93-209ENST00000488908 LONRF2Q1L5Z9 754 aa4.42□□□□□ -1.7
CCDC93-209ENST00000488908 Q6YL49 198 aa4.42□□□□□ -1.7
CCDC93-209ENST00000488908 BMP8AQ7Z5Y6 402 aa4.42□□□□□ -1.7
CCDC93-209ENST00000488908 CXorf67Q86X51 503 aaPredicted RBP4.42□□□□□ -1.7
CCDC93-209ENST00000488908 SLC43A3Q8NBI5 491 aa4.42□□□□□ -1.7
CCDC93-209ENST00000488908 SLC7A14Q8TBB6 771 aa4.42□□□□□ -1.7
CCDC93-209ENST00000488908 BOCQ9BWV1 1114 aa4.42□□□□□ -1.7
CCDC93-209ENST00000488908 SFMBT1Q9UHJ3 866 aa4.42□□□□□ -1.7
CCDC93-209ENST00000488908 DNAI1Q9UI46 699 aa4.42□□□□□ -1.7
CCDC93-209ENST00000488908 CENPVL1A0A0U1RR11 272 aa4.41□□□□□ -1.7
CCDC93-209ENST00000488908 UBA6A0AVT1 1052 aaPredicted RBP4.41□□□□□ -1.7
CCDC93-209ENST00000488908 KRTAP29-1A8MX34 341 aaPredicted RBP4.41□□□□□ -1.7
CCDC93-209ENST00000488908 MTSS1O43312 755 aa4.41□□□□□ -1.7
CCDC93-209ENST00000488908 ERBB2P04626 1255 aa4.41□□□□□ -1.7
CCDC93-209ENST00000488908 FAM153BP0C7A2 387 aa4.41□□□□□ -1.7
CCDC93-209ENST00000488908 ZBTB48P10074 688 aaPredicted RBP4.41□□□□□ -1.7
CCDC93-209ENST00000488908 TCF3P15923 654 aa4.41□□□□□ -1.7
CCDC93-209ENST00000488908 CLK3P49761 638 aaKnown RBP4.41□□□□□ -1.7
CCDC93-209ENST00000488908 TMEM177Q53S58 311 aa4.41□□□□□ -1.7
CCDC93-209ENST00000488908 TTC38Q5R3I4 469 aa4.41□□□□□ -1.7
CCDC93-209ENST00000488908 IQSEC1Q6DN90 963 aa4.41□□□□□ -1.7
CCDC93-209ENST00000488908 GSTCDQ8NEC7 633 aa4.41□□□□□ -1.7
CCDC93-209ENST00000488908 RPGRQ92834 1020 aaKnown RBP4.41□□□□□ -1.7
CCDC93-209ENST00000488908 MYEOVQ96EZ4 313 aa4.41□□□□□ -1.7
CCDC93-209ENST00000488908 SLC46A2Q9BY10 475 aa4.41□□□□□ -1.7
CCDC93-209ENST00000488908 EIF2B4Q9UI10 523 aaKnown RBP4.41□□□□□ -1.7
CCDC93-209ENST00000488908 SYNPO2Q9UMS6 1093 aa4.41□□□□□ -1.7
CCDC93-209ENST00000488908 DIAPH1O60610 1272 aaKnown RBP4.4□□□□□ -1.71
CCDC93-209ENST00000488908 STC2O76061 302 aa4.4□□□□□ -1.71
CCDC93-209ENST00000488908 HNRNPLP14866 589 aaKnown RBP eCLIP4.4□□□□□ -1.71
CCDC93-209ENST00000488908 ZFP36P26651 326 aaKnown RBP4.4□□□□□ -1.71
CCDC93-209ENST00000488908 ZEB1P37275 1124 aaPredicted RBP4.4□□□□□ -1.71
CCDC93-209ENST00000488908 AVPR1BP47901 424 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms