RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 SPG21Q9NZD8 308 aa20.72■□□□□ 0.91
HDAC6-231ENST00000488905 IGKV6-21A0A0C4DH24 114 aa20.71■□□□□ 0.91
HDAC6-231ENST00000488905 HIDE1A8MVS5 230 aa20.71■□□□□ 0.91
HDAC6-231ENST00000488905 CSDE1O75534 798 aaKnown RBP20.71■□□□□ 0.91
HDAC6-231ENST00000488905 STBD1O95210 358 aa20.71■□□□□ 0.91
HDAC6-231ENST00000488905 EOMESO95936 686 aa20.71■□□□□ 0.91
HDAC6-231ENST00000488905 KRT17Q04695 432 aa20.71■□□□□ 0.91
HDAC6-231ENST00000488905 NONOQ15233 471 aaKnown RBP eCLIP20.71■□□□□ 0.91
HDAC6-231ENST00000488905 ANKRD54Q6NXT1 300 aa20.71■□□□□ 0.91
HDAC6-231ENST00000488905 SLC39A11Q8N1S5 342 aa20.71■□□□□ 0.91
HDAC6-231ENST00000488905 RPGRIP1Q96KN7 1286 aa20.71■□□□□ 0.91
HDAC6-231ENST00000488905 AIFM3Q96NN9 605 aa20.71■□□□□ 0.91
HDAC6-231ENST00000488905 USP34Q70CQ2 3546 aa20.7■□□□□ 0.9
HDAC6-231ENST00000488905 SFPQP23246 707 aaKnown RBP eCLIP20.7■□□□□ 0.9
HDAC6-231ENST00000488905 TECP42680 631 aa20.7■□□□□ 0.9
HDAC6-231ENST00000488905 CDC42EP1Q00587 391 aa20.7■□□□□ 0.9
HDAC6-231ENST00000488905 STK3Q13188 491 aa20.7■□□□□ 0.9
HDAC6-231ENST00000488905 GALNT17Q6IS24 598 aa20.7■□□□□ 0.9
HDAC6-231ENST00000488905 LLGL2Q6P1M3 1020 aa20.7■□□□□ 0.9
HDAC6-231ENST00000488905 CPLX2Q6PUV4 134 aaKnown RBP20.7■□□□□ 0.9
HDAC6-231ENST00000488905 TMC7Q7Z402 723 aa20.7■□□□□ 0.9
HDAC6-231ENST00000488905 FBXL18Q96ME1 805 aa20.7■□□□□ 0.9
HDAC6-231ENST00000488905 SH2D3AQ9BRG2 576 aa20.7■□□□□ 0.9
HDAC6-231ENST00000488905 TM6SF1Q9BZW5 370 aa20.7■□□□□ 0.9
HDAC6-231ENST00000488905 DDX25Q9UHL0 483 aaKnown RBP20.7■□□□□ 0.9
HDAC6-231ENST00000488905 A0A087WZ62 844 aa20.69■□□□□ 0.9
HDAC6-231ENST00000488905 DNM2P50570 870 aa20.69■□□□□ 0.9
HDAC6-231ENST00000488905 NHLH1Q02575 133 aa20.69■□□□□ 0.9
HDAC6-231ENST00000488905 SMC1AQ14683 1233 aaKnown RBP20.69■□□□□ 0.9
HDAC6-231ENST00000488905 INF2Q27J81 1249 aa20.69■□□□□ 0.9
HDAC6-231ENST00000488905 TRIM67Q6ZTA4 783 aa20.69■□□□□ 0.9
HDAC6-231ENST00000488905 KRT25Q7Z3Z0 450 aa20.69■□□□□ 0.9
HDAC6-231ENST00000488905 ZNF410Q86VK4 478 aa20.69■□□□□ 0.9
HDAC6-231ENST00000488905 FDXACB1Q9BRP7 624 aaPredicted RBP20.69■□□□□ 0.9
HDAC6-231ENST00000488905 LARP6Q9BRS8 491 aaKnown RBP20.69■□□□□ 0.9
HDAC6-231ENST00000488905 S1PR5Q9H228 398 aa20.69■□□□□ 0.9
HDAC6-231ENST00000488905 CHST12Q9NRB3 414 aa20.69■□□□□ 0.9
HDAC6-231ENST00000488905 MYO10Q9HD67 2058 aa20.68■□□□□ 0.9
HDAC6-231ENST00000488905 TMEM221A6NGB7 291 aa20.68■□□□□ 0.9
HDAC6-231ENST00000488905 M0R296 226 aa20.68■□□□□ 0.9
HDAC6-231ENST00000488905 SLC37A4O43826 429 aa20.68■□□□□ 0.9
HDAC6-231ENST00000488905 MAFO75444 373 aaPredicted RBP20.68■□□□□ 0.9
HDAC6-231ENST00000488905 PHKA2P46019 1235 aa20.68■□□□□ 0.9
HDAC6-231ENST00000488905 ZXDAP98168 799 aa20.68■□□□□ 0.9
HDAC6-231ENST00000488905 TWF2Q6IBS0 349 aaKnown RBP20.68■□□□□ 0.9
HDAC6-231ENST00000488905 SYCE2Q6PIF2 218 aa20.68■□□□□ 0.9
HDAC6-231ENST00000488905 BMP8AQ7Z5Y6 402 aa20.68■□□□□ 0.9
HDAC6-231ENST00000488905 RHPN2Q8IUC4 686 aa20.68■□□□□ 0.9
HDAC6-231ENST00000488905 RSPH1Q8WYR4 309 aa20.68■□□□□ 0.9
HDAC6-231ENST00000488905 TRAIPQ9BWF2 469 aa20.68■□□□□ 0.9
HDAC6-231ENST00000488905 SUCLA2Q9P2R7 463 aaPredicted RBP20.68■□□□□ 0.9
HDAC6-231ENST00000488905 PIN4Q9Y237 131 aaKnown RBP20.68■□□□□ 0.9
HDAC6-231ENST00000488905 DENND4AQ7Z401 1863 aa20.68■□□□□ 0.9
HDAC6-231ENST00000488905 DDX11L8A8MPP1 907 aa20.67■□□□□ 0.9
HDAC6-231ENST00000488905 HOXB8P17481 243 aaPredicted RBP20.67■□□□□ 0.9
HDAC6-231ENST00000488905 BCAR1P56945 870 aa20.67■□□□□ 0.9
HDAC6-231ENST00000488905 PSMC5P62195 406 aa20.67■□□□□ 0.9
HDAC6-231ENST00000488905 LETM2Q2VYF4 491 aa20.67■□□□□ 0.9
HDAC6-231ENST00000488905 PLA2G4FQ68DD2 849 aa20.67■□□□□ 0.9
HDAC6-231ENST00000488905 ANO5Q75V66 913 aa20.67■□□□□ 0.9
HDAC6-231ENST00000488905 ALYREFQ86V81 257 aaKnown RBP20.67■□□□□ 0.9
HDAC6-231ENST00000488905 CASP10Q92851 521 aa20.67■□□□□ 0.9
HDAC6-231ENST00000488905 JPH2Q9BR39 696 aaPredicted RBP20.67■□□□□ 0.9
HDAC6-231ENST00000488905 APOL5Q9BWW9 433 aa20.67■□□□□ 0.9
HDAC6-231ENST00000488905 INO80BQ9C086 356 aaPredicted RBP20.67■□□□□ 0.9
HDAC6-231ENST00000488905 VAV3Q9UKW4 847 aa20.67■□□□□ 0.9
HDAC6-231ENST00000488905 KCNJ14Q9UNX9 436 aa20.67■□□□□ 0.9
HDAC6-231ENST00000488905 C2orf71A6NGG8 1288 aa20.66■□□□□ 0.9
HDAC6-231ENST00000488905 NT5C1B-RDH14C9J2C7 533 aa20.66■□□□□ 0.9
HDAC6-231ENST00000488905 EML1O00423 815 aa20.66■□□□□ 0.9
HDAC6-231ENST00000488905 ZC3H11AO75152 810 aaKnown RBP eCLIP20.66■□□□□ 0.9
HDAC6-231ENST00000488905 ALDH7A1P49419 539 aaKnown RBP20.66■□□□□ 0.9
HDAC6-231ENST00000488905 PPP2R5CQ13362 524 aa20.66■□□□□ 0.9
HDAC6-231ENST00000488905 MRPL43Q8N983 215 aaKnown RBP20.66■□□□□ 0.9
HDAC6-231ENST00000488905 TMEM169Q96HH4 297 aa20.66■□□□□ 0.9
HDAC6-231ENST00000488905 NLRP4Q96MN2 994 aa20.66■□□□□ 0.9
HDAC6-231ENST00000488905 PHF20Q9BVI0 1012 aa20.66■□□□□ 0.9
HDAC6-231ENST00000488905 KCNMB3Q9NPA1 279 aa20.66■□□□□ 0.9
HDAC6-231ENST00000488905 HCFC2Q9Y5Z7 792 aa20.66■□□□□ 0.9
HDAC6-231ENST00000488905 STK36Q9NRP7 1315 aa20.65■□□□□ 0.9
HDAC6-231ENST00000488905 CCDC194A0A1B0GVG4 234 aa20.65■□□□□ 0.9
HDAC6-231ENST00000488905 CDKL5O76039 1030 aa20.65■□□□□ 0.9
HDAC6-231ENST00000488905 SKIP12755 728 aa20.65■□□□□ 0.9
HDAC6-231ENST00000488905 RAB27AP51159 221 aa20.65■□□□□ 0.9
HDAC6-231ENST00000488905 SIGLEC14Q08ET2 396 aa20.65■□□□□ 0.9
HDAC6-231ENST00000488905 TPRNQ4KMQ1 711 aa20.65■□□□□ 0.9
HDAC6-231ENST00000488905 CATSPER4Q7RTX7 472 aa20.65■□□□□ 0.9
HDAC6-231ENST00000488905 NEK8Q86SG6 692 aa20.65■□□□□ 0.9
HDAC6-231ENST00000488905 TMEM173Q86WV6 379 aaPredicted RBP20.65■□□□□ 0.9
HDAC6-231ENST00000488905 KSR1Q8IVT5 923 aa20.65■□□□□ 0.9
HDAC6-231ENST00000488905 LPPQ93052 612 aa20.65■□□□□ 0.9
HDAC6-231ENST00000488905 PBXIP1Q96AQ6 731 aa20.65■□□□□ 0.9
HDAC6-231ENST00000488905 CYP26B1Q9NR63 512 aa20.65■□□□□ 0.9
HDAC6-231ENST00000488905 PDRG1Q9NUG6 133 aa20.65■□□□□ 0.9
HDAC6-231ENST00000488905 FAM105AQ9NUU6 356 aa20.65■□□□□ 0.9
HDAC6-231ENST00000488905 CACNA1HO95180 2353 aa20.64■□□□□ 0.89
HDAC6-231ENST00000488905 CARNS1A5YM72 827 aa20.64■□□□□ 0.89
HDAC6-231ENST00000488905 GCFC2P16383 781 aaKnown RBP20.64■□□□□ 0.89
HDAC6-231ENST00000488905 CA8P35219 290 aa20.64■□□□□ 0.89
HDAC6-231ENST00000488905 QARSP47897 775 aaKnown RBP20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms