RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 WNT8AQ9H1J5 351 aa5.5□□□□□ -1.53
SSR1-209ENST00000488834 TOPORSQ9NS56 1045 aaPredicted RBP5.5□□□□□ -1.53
SSR1-209ENST00000488834 ATP8A1Q9Y2Q0 1164 aa5.5□□□□□ -1.53
SSR1-209ENST00000488834 PPP2R3BQ9Y5P8 575 aa5.5□□□□□ -1.53
SSR1-209ENST00000488834 FSBPO95073 299 aa5.49□□□□□ -1.53
SSR1-209ENST00000488834 EYA4O95677 639 aa5.49□□□□□ -1.53
SSR1-209ENST00000488834 CR2P20023 1033 aa5.49□□□□□ -1.53
SSR1-209ENST00000488834 IBSPP21815 317 aaPredicted RBP5.49□□□□□ -1.53
SSR1-209ENST00000488834 NRG3P56975 720 aa5.49□□□□□ -1.53
SSR1-209ENST00000488834 SCAND1P57086 179 aa5.49□□□□□ -1.53
SSR1-209ENST00000488834 UGT8Q16880 541 aa5.49□□□□□ -1.53
SSR1-209ENST00000488834 ZNF827Q17R98 1081 aa5.49□□□□□ -1.53
SSR1-209ENST00000488834 LMBR1LQ6UX01 489 aa5.49□□□□□ -1.53
SSR1-209ENST00000488834 LHFPL2Q6ZUX7 228 aa5.49□□□□□ -1.53
SSR1-209ENST00000488834 TAX1BP1Q86VP1 789 aa5.49□□□□□ -1.53
SSR1-209ENST00000488834 DDX42Q86XP3 938 aaKnown RBP eCLIP5.49□□□□□ -1.53
SSR1-209ENST00000488834 FAM177A1Q8N128 213 aaPredicted RBP5.49□□□□□ -1.53
SSR1-209ENST00000488834 BCL6BQ8N143 479 aaPredicted RBP5.49□□□□□ -1.53
SSR1-209ENST00000488834 GAB3Q8WWW8 586 aa5.49□□□□□ -1.53
SSR1-209ENST00000488834 SLC7A6OSQ96CW6 309 aaPredicted RBP5.49□□□□□ -1.53
SSR1-209ENST00000488834 AHCYL2Q96HN2 611 aaKnown RBP5.49□□□□□ -1.53
SSR1-209ENST00000488834 GNRHR2Q96P88 292 aa5.49□□□□□ -1.53
SSR1-209ENST00000488834 UIMC1Q96RL1 719 aa5.49□□□□□ -1.53
SSR1-209ENST00000488834 DPYSL5Q9BPU6 564 aa5.49□□□□□ -1.53
SSR1-209ENST00000488834 PPP4R1LQ9P1A2 415 aa5.49□□□□□ -1.53
SSR1-209ENST00000488834 OAZ3Q9UMX2 235 aa5.49□□□□□ -1.53
SSR1-209ENST00000488834 ITGB3P05106 788 aa5.48□□□□□ -1.53
SSR1-209ENST00000488834 LPLP06858 475 aa5.48□□□□□ -1.53
SSR1-209ENST00000488834 HNRNPLP14866 589 aaKnown RBP eCLIP5.48□□□□□ -1.53
SSR1-209ENST00000488834 BUD31P41223 144 aaPredicted RBP5.48□□□□□ -1.53
SSR1-209ENST00000488834 MANFP55145 182 aaKnown RBP5.48□□□□□ -1.53
SSR1-209ENST00000488834 BPIFB4P59827 614 aa5.48□□□□□ -1.53
SSR1-209ENST00000488834 ATP2C1P98194 919 aaPredicted RBP5.48□□□□□ -1.53
SSR1-209ENST00000488834 NFYCQ13952 458 aa5.48□□□□□ -1.53
SSR1-209ENST00000488834 TBR1Q16650 682 aa5.48□□□□□ -1.53
SSR1-209ENST00000488834 CT83Q5H943 113 aa5.48□□□□□ -1.53
SSR1-209ENST00000488834 COG1Q8WTW3 980 aa5.48□□□□□ -1.53
SSR1-209ENST00000488834 RSAD2Q8WXG1 361 aa5.48□□□□□ -1.53
SSR1-209ENST00000488834 OR14A2Q96R54 314 aa5.48□□□□□ -1.53
SSR1-209ENST00000488834 FAM126AQ9BYI3 521 aaPredicted RBP5.48□□□□□ -1.53
SSR1-209ENST00000488834 KRTAP4-2Q9BYR5 136 aa5.48□□□□□ -1.53
SSR1-209ENST00000488834 C14orf119Q9NWQ9 140 aa5.48□□□□□ -1.53
SSR1-209ENST00000488834 COL4A3BPQ9Y5P4 624 aa5.48□□□□□ -1.53
SSR1-209ENST00000488834 NUMBLQ9Y6R0 609 aa5.48□□□□□ -1.53
SSR1-209ENST00000488834 WASHC2AQ641Q2 1341 aa5.48□□□□□ -1.53
SSR1-209ENST00000488834 SHROOM4Q9ULL8 1493 aa5.47□□□□□ -1.53
SSR1-209ENST00000488834 PFKMP08237 780 aa5.47□□□□□ -1.53
SSR1-209ENST00000488834 TCIRG1Q13488 830 aa5.47□□□□□ -1.53
SSR1-209ENST00000488834 SPIDRQ14159 915 aa5.47□□□□□ -1.53
SSR1-209ENST00000488834 PDCD1Q15116 288 aa5.47□□□□□ -1.53
SSR1-209ENST00000488834 FSCN1Q16658 493 aaKnown RBP5.47□□□□□ -1.53
SSR1-209ENST00000488834 GLB1L2Q8IW92 636 aa5.47□□□□□ -1.53
SSR1-209ENST00000488834 ANKRD53Q8N9V6 530 aa5.47□□□□□ -1.53
SSR1-209ENST00000488834 PLA2G15Q8NCC3 412 aa5.47□□□□□ -1.53
SSR1-209ENST00000488834 OR14C36Q8NHC7 312 aa5.47□□□□□ -1.53
SSR1-209ENST00000488834 TGFBRAP1Q8WUH2 860 aa5.47□□□□□ -1.53
SSR1-209ENST00000488834 EAF2Q96CJ1 260 aaPredicted RBP5.47□□□□□ -1.53
SSR1-209ENST00000488834 RPL10LQ96L21 214 aaKnown RBP5.47□□□□□ -1.53
SSR1-209ENST00000488834 MEGF9Q9H1U4 602 aa5.47□□□□□ -1.53
SSR1-209ENST00000488834 SLC6A15Q9H2J7 730 aa5.47□□□□□ -1.53
SSR1-209ENST00000488834 KCTD10Q9H3F6 313 aa5.47□□□□□ -1.53
SSR1-209ENST00000488834 C14orf93Q9H972 538 aaKnown RBP5.47□□□□□ -1.53
SSR1-209ENST00000488834 SLC5A4Q9NY91 659 aa5.47□□□□□ -1.53
SSR1-209ENST00000488834 NCDNQ9UBB6 729 aa5.47□□□□□ -1.53
SSR1-209ENST00000488834 RCAN3Q9UKA8 241 aa5.47□□□□□ -1.53
SSR1-209ENST00000488834 EDARQ9UNE0 448 aa5.47□□□□□ -1.53
SSR1-209ENST00000488834 CTDP1Q9Y5B0 961 aaPredicted RBP5.47□□□□□ -1.53
SSR1-209ENST00000488834 A0A1W2PRX2 142 aa5.46□□□□□ -1.54
SSR1-209ENST00000488834 SLC26A4O43511 780 aa5.46□□□□□ -1.54
SSR1-209ENST00000488834 PRKD3O94806 890 aa5.46□□□□□ -1.54
SSR1-209ENST00000488834 CDK11BP21127 795 aaKnown RBP5.46□□□□□ -1.54
SSR1-209ENST00000488834 ENPP1P22413 925 aa5.46□□□□□ -1.54
SSR1-209ENST00000488834 RPS19P39019 145 aaKnown RBP5.46□□□□□ -1.54
SSR1-209ENST00000488834 GPR15P49685 360 aa5.46□□□□□ -1.54
SSR1-209ENST00000488834 LGALS4P56470 323 aa5.46□□□□□ -1.54
SSR1-209ENST00000488834 MGAT5Q09328 741 aa5.46□□□□□ -1.54
SSR1-209ENST00000488834 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.46□□□□□ -1.54
SSR1-209ENST00000488834 HS1BP3Q53T59 392 aa5.46□□□□□ -1.54
SSR1-209ENST00000488834 CCDC178Q5BJE1 867 aa5.46□□□□□ -1.54
SSR1-209ENST00000488834 PITRM1Q5JRX3 1037 aa5.46□□□□□ -1.54
SSR1-209ENST00000488834 SHCBP1Q8NEM2 672 aa5.46□□□□□ -1.54
SSR1-209ENST00000488834 NKD2Q969F2 451 aaPredicted RBP5.46□□□□□ -1.54
SSR1-209ENST00000488834 RAX2Q96IS3 184 aa5.46□□□□□ -1.54
SSR1-209ENST00000488834 OSBPL6Q9BZF3 934 aa5.46□□□□□ -1.54
SSR1-209ENST00000488834 DEF6Q9H4E7 631 aa5.46□□□□□ -1.54
SSR1-209ENST00000488834 VTA1Q9NP79 307 aa5.46□□□□□ -1.54
SSR1-209ENST00000488834 PRSS50Q9UI38 385 aa5.46□□□□□ -1.54
SSR1-209ENST00000488834 CNOT11Q9UKZ1 510 aaKnown RBP5.46□□□□□ -1.54
SSR1-209ENST00000488834 C2orf78A6NCI8 922 aa5.45□□□□□ -1.54
SSR1-209ENST00000488834 B8ZZF3 427 aa5.45□□□□□ -1.54
SSR1-209ENST00000488834 GPR42O15529 346 aa5.45□□□□□ -1.54
SSR1-209ENST00000488834 TOX4O94842 621 aa5.45□□□□□ -1.54
SSR1-209ENST00000488834 FAM50AQ14320 339 aaKnown RBP5.45□□□□□ -1.54
SSR1-209ENST00000488834 ACAP1Q15027 740 aa5.45□□□□□ -1.54
SSR1-209ENST00000488834 PTPROQ16827 1216 aa5.45□□□□□ -1.54
SSR1-209ENST00000488834 TCTN3Q6NUS6 607 aa5.45□□□□□ -1.54
SSR1-209ENST00000488834 CLEC14AQ86T13 490 aa5.45□□□□□ -1.54
SSR1-209ENST00000488834 AMOTL1Q8IY63 956 aa5.45□□□□□ -1.54
SSR1-209ENST00000488834 SAMD11Q96NU1 681 aa5.45□□□□□ -1.54
SSR1-209ENST00000488834 PLA2G12BQ9BX93 195 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms