RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 CNNM2Q9H8M5 875 aa17.42■□□□□ 0.38
MCF2L-229ENST00000488765 FAM114A2Q9NRY5 505 aa17.42■□□□□ 0.38
MCF2L-229ENST00000488765 SRP68Q9UHB9 627 aaKnown RBP17.42■□□□□ 0.38
MCF2L-229ENST00000488765 BCL9LQ86UU0 1499 aa17.42■□□□□ 0.38
MCF2L-229ENST00000488765 MRC1P22897 1456 aa17.42■□□□□ 0.38
MCF2L-229ENST00000488765 CIAO1O76071 339 aa17.42■□□□□ 0.38
MCF2L-229ENST00000488765 CSF1RP07333 972 aa17.42■□□□□ 0.38
MCF2L-229ENST00000488765 TMED1Q13445 227 aa17.42■□□□□ 0.38
MCF2L-229ENST00000488765 RASGRF1Q13972 1273 aa17.42■□□□□ 0.38
MCF2L-229ENST00000488765 ASIC2Q16515 512 aa17.42■□□□□ 0.38
MCF2L-229ENST00000488765 C6orf118Q5T5N4 469 aa17.42■□□□□ 0.38
MCF2L-229ENST00000488765 DNAJC14Q6Y2X3 702 aaPredicted RBP17.42■□□□□ 0.38
MCF2L-229ENST00000488765 PPP1R9AQ9ULJ8 1098 aa17.42■□□□□ 0.38
MCF2L-229ENST00000488765 ANKRD63C9JTQ0 380 aa17.41■□□□□ 0.38
MCF2L-229ENST00000488765 CCNG1P51959 295 aa17.41■□□□□ 0.38
MCF2L-229ENST00000488765 CFAP157Q5JU67 520 aa17.41■□□□□ 0.38
MCF2L-229ENST00000488765 PALB2Q86YC2 1186 aa17.41■□□□□ 0.38
MCF2L-229ENST00000488765 U2AF1L4Q8WU68 220 aaKnown RBP17.41■□□□□ 0.38
MCF2L-229ENST00000488765 ZNF333Q96JL9 665 aa17.41■□□□□ 0.38
MCF2L-229ENST00000488765 LRRC37BQ96QE4 947 aa17.41■□□□□ 0.38
MCF2L-229ENST00000488765 ERP44Q9BS26 406 aa17.41■□□□□ 0.38
MCF2L-229ENST00000488765 NT5C3AQ9H0P0 336 aa17.41■□□□□ 0.38
MCF2L-229ENST00000488765 SLC9A1P19634 815 aa17.41■□□□□ 0.38
MCF2L-229ENST00000488765 FUT2Q10981 343 aa17.41■□□□□ 0.38
MCF2L-229ENST00000488765 MPP3Q13368 585 aa17.41■□□□□ 0.38
MCF2L-229ENST00000488765 SETDB1Q15047 1291 aa17.41■□□□□ 0.38
MCF2L-229ENST00000488765 CYP4X1Q8N118 509 aa17.41■□□□□ 0.38
MCF2L-229ENST00000488765 GBP7Q8N8V2 638 aaPredicted RBP17.41■□□□□ 0.38
MCF2L-229ENST00000488765 ACTRT1Q8TDG2 376 aa17.41■□□□□ 0.38
MCF2L-229ENST00000488765 TFCP2L1Q9NZI6 479 aa17.41■□□□□ 0.38
MCF2L-229ENST00000488765 DCTN4Q9UJW0 460 aa17.41■□□□□ 0.38
MCF2L-229ENST00000488765 USP20Q9Y2K6 914 aa17.41■□□□□ 0.38
MCF2L-229ENST00000488765 SSU72P8A0A1W2PR75 194 aa17.4■□□□□ 0.38
MCF2L-229ENST00000488765 OAS1P00973 400 aaKnown RBP17.4■□□□□ 0.38
MCF2L-229ENST00000488765 RPL21P46778 160 aaKnown RBP17.4■□□□□ 0.38
MCF2L-229ENST00000488765 C3orf67Q6ZVT6 689 aa17.4■□□□□ 0.38
MCF2L-229ENST00000488765 C4orf32Q8N8J7 132 aa17.4■□□□□ 0.38
MCF2L-229ENST00000488765 FAM136AQ96C01 138 aa17.4■□□□□ 0.38
MCF2L-229ENST00000488765 PGM2Q96G03 612 aa17.4■□□□□ 0.38
MCF2L-229ENST00000488765 CHKBQ9Y259 395 aa17.4■□□□□ 0.38
MCF2L-229ENST00000488765 WASF2Q9Y6W5 498 aa17.4■□□□□ 0.38
MCF2L-229ENST00000488765 FGFR1OPO95684 399 aaKnown RBP17.4■□□□□ 0.38
MCF2L-229ENST00000488765 TXKP42681 527 aa17.4■□□□□ 0.38
MCF2L-229ENST00000488765 KLRC3Q07444 240 aa17.4■□□□□ 0.38
MCF2L-229ENST00000488765 KPNB1Q14974 876 aaKnown RBP17.4■□□□□ 0.38
MCF2L-229ENST00000488765 HP1BP3Q5SSJ5 553 aaPredicted RBP17.4■□□□□ 0.38
MCF2L-229ENST00000488765 INTS5Q6P9B9 1019 aaKnown RBP17.4■□□□□ 0.38
MCF2L-229ENST00000488765 CAPN12Q6ZSI9 719 aa17.4■□□□□ 0.38
MCF2L-229ENST00000488765 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.4■□□□□ 0.38
MCF2L-229ENST00000488765 SCYL3Q8IZE3 742 aa17.4■□□□□ 0.38
MCF2L-229ENST00000488765 TPCN2Q8NHX9 752 aa17.4■□□□□ 0.38
MCF2L-229ENST00000488765 ZWILCHQ9H900 591 aa17.4■□□□□ 0.38
MCF2L-229ENST00000488765 ZDHHC18Q9NUE0 388 aa17.4■□□□□ 0.38
MCF2L-229ENST00000488765 CLIC5Q9NZA1 410 aa17.4■□□□□ 0.38
MCF2L-229ENST00000488765 WDR91A4D1P6 747 aa17.4■□□□□ 0.38
MCF2L-229ENST00000488765 PRPF3O43395 683 aaKnown RBP17.4■□□□□ 0.38
MCF2L-229ENST00000488765 STK10O94804 968 aaKnown RBP17.4■□□□□ 0.38
MCF2L-229ENST00000488765 OR6B1O95007 311 aa17.4■□□□□ 0.38
MCF2L-229ENST00000488765 TJP3O95049 919 aa17.4■□□□□ 0.38
MCF2L-229ENST00000488765 HNRNPCP07910 306 aaKnown RBP eCLIP17.4■□□□□ 0.38
MCF2L-229ENST00000488765 FOXN2P32314 431 aa17.4■□□□□ 0.38
MCF2L-229ENST00000488765 DYNC1I2Q13409 638 aaKnown RBP17.4■□□□□ 0.38
MCF2L-229ENST00000488765 JAMLQ86YT9 394 aa17.4■□□□□ 0.38
MCF2L-229ENST00000488765 SPATA5Q8NB90 893 aa17.4■□□□□ 0.38
MCF2L-229ENST00000488765 ESR2Q92731 530 aa17.4■□□□□ 0.38
MCF2L-229ENST00000488765 TUBGCP5Q96RT8 1024 aa17.4■□□□□ 0.38
MCF2L-229ENST00000488765 DDX18Q9NVP1 670 aaKnown RBP17.4■□□□□ 0.38
MCF2L-229ENST00000488765 CCDC160A6NGH7 325 aa17.39■□□□□ 0.37
MCF2L-229ENST00000488765 AGTP01019 485 aa17.39■□□□□ 0.37
MCF2L-229ENST00000488765 VSTM1Q6UX27 236 aa17.39■□□□□ 0.37
MCF2L-229ENST00000488765 TAOK1Q7L7X3 1001 aa17.39■□□□□ 0.37
MCF2L-229ENST00000488765 KBTBD2Q8IY47 623 aa17.39■□□□□ 0.37
MCF2L-229ENST00000488765 FGFBP2Q9BYJ0 223 aa17.39■□□□□ 0.37
MCF2L-229ENST00000488765 TCP11L1Q9NUJ3 509 aa17.39■□□□□ 0.37
MCF2L-229ENST00000488765 UBAP1LF5GYI3 381 aa17.39■□□□□ 0.37
MCF2L-229ENST00000488765 CCNT1O60563 726 aaKnown RBP17.39■□□□□ 0.37
MCF2L-229ENST00000488765 ACADSP16219 412 aa17.39■□□□□ 0.37
MCF2L-229ENST00000488765 MAGEA8P43361 318 aa17.39■□□□□ 0.37
MCF2L-229ENST00000488765 SGSM1Q2NKQ1 1148 aa17.39■□□□□ 0.37
MCF2L-229ENST00000488765 ERFEQ4G0M1 354 aa17.39■□□□□ 0.37
MCF2L-229ENST00000488765 KIAA1755Q5JYT7 1200 aa17.39■□□□□ 0.37
MCF2L-229ENST00000488765 ZDHHC24Q6UX98 284 aa17.39■□□□□ 0.37
MCF2L-229ENST00000488765 HIC2Q96JB3 615 aa17.39■□□□□ 0.37
MCF2L-229ENST00000488765 NACAP1Q9BZK3 213 aa17.39■□□□□ 0.37
MCF2L-229ENST00000488765 ARMCX3Q9UH62 379 aaPredicted RBP17.39■□□□□ 0.37
MCF2L-229ENST00000488765 BCS1LQ9Y276 419 aa17.39■□□□□ 0.37
MCF2L-229ENST00000488765 AFDNP55196 1824 aaKnown RBP17.38■□□□□ 0.37
MCF2L-229ENST00000488765 SKIP12755 728 aa17.38■□□□□ 0.37
MCF2L-229ENST00000488765 SCG2P13521 617 aa17.38■□□□□ 0.37
MCF2L-229ENST00000488765 SLC5A1P13866 664 aa17.38■□□□□ 0.37
MCF2L-229ENST00000488765 IL6STP40189 918 aaPredicted RBP17.38■□□□□ 0.37
MCF2L-229ENST00000488765 RTP1P59025 263 aa17.38■□□□□ 0.37
MCF2L-229ENST00000488765 HS2ST1Q7LGA3 356 aa17.38■□□□□ 0.37
MCF2L-229ENST00000488765 ZSCAN10Q96SZ4 725 aaPredicted RBP17.38■□□□□ 0.37
MCF2L-229ENST00000488765 MKNK1Q9BUB5 465 aa17.38■□□□□ 0.37
MCF2L-229ENST00000488765 ZNF711Q9Y462 761 aa17.38■□□□□ 0.37
MCF2L-229ENST00000488765 COL18A1P39060 1754 aa17.38■□□□□ 0.37
MCF2L-229ENST00000488765 MYMKA6NI61 221 aa17.38■□□□□ 0.37
MCF2L-229ENST00000488765 TBX10O75333 385 aa17.38■□□□□ 0.37
MCF2L-229ENST00000488765 BAG2O95816 211 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms