RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 ATL2Q8NHH9 583 aa4.54□□□□□ -1.68
CD46-215ENST00000488596 ZCRB1Q8TBF4 217 aaKnown RBP4.54□□□□□ -1.68
CD46-215ENST00000488596 CHTF18Q8WVB6 975 aa4.54□□□□□ -1.68
CD46-215ENST00000488596 TMEM176AQ96HP8 235 aa4.54□□□□□ -1.68
CD46-215ENST00000488596 TMX1Q9H3N1 280 aa4.54□□□□□ -1.68
CD46-215ENST00000488596 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.54□□□□□ -1.68
CD46-215ENST00000488596 MSL2Q9HCI7 577 aa4.54□□□□□ -1.68
CD46-215ENST00000488596 THG1LQ9NWX6 298 aaKnown RBP4.54□□□□□ -1.68
CD46-215ENST00000488596 H2AFY2Q9P0M6 372 aaPredicted RBP4.54□□□□□ -1.68
CD46-215ENST00000488596 Q9UFV3 132 aa4.54□□□□□ -1.68
CD46-215ENST00000488596 ZKSCAN5Q9Y2L8 839 aa4.54□□□□□ -1.68
CD46-215ENST00000488596 ATP8A1Q9Y2Q0 1164 aa4.54□□□□□ -1.68
CD46-215ENST00000488596 NOP58Q9Y2X3 529 aaKnown RBP4.54□□□□□ -1.68
CD46-215ENST00000488596 SLC12A8A0AV02 714 aa4.53□□□□□ -1.68
CD46-215ENST00000488596 NEMP1O14524 444 aa4.53□□□□□ -1.68
CD46-215ENST00000488596 DVL2O14641 736 aa4.53□□□□□ -1.68
CD46-215ENST00000488596 GAS7O60861 476 aa4.53□□□□□ -1.68
CD46-215ENST00000488596 EYA4O95677 639 aa4.53□□□□□ -1.68
CD46-215ENST00000488596 MMEP08473 750 aa4.53□□□□□ -1.68
CD46-215ENST00000488596 CDKN1CP49918 316 aaPredicted RBP4.53□□□□□ -1.68
CD46-215ENST00000488596 MEOX1P50221 254 aa4.53□□□□□ -1.68
CD46-215ENST00000488596 NANOS3P60323 173 aaKnown RBP4.53□□□□□ -1.68
CD46-215ENST00000488596 DSG1Q02413 1049 aa4.53□□□□□ -1.68
CD46-215ENST00000488596 SART3Q15020 963 aaKnown RBP4.53□□□□□ -1.68
CD46-215ENST00000488596 KIF18BQ86Y91 864 aa4.53□□□□□ -1.68
CD46-215ENST00000488596 RTKN2Q8IZC4 609 aa4.53□□□□□ -1.68
CD46-215ENST00000488596 OR2W6PQ8NHA6 318 aa4.53□□□□□ -1.68
CD46-215ENST00000488596 ZNF483Q8TF39 744 aaPredicted RBP4.53□□□□□ -1.68
CD46-215ENST00000488596 USP7Q93009 1102 aa4.53□□□□□ -1.68
CD46-215ENST00000488596 ORAI3Q9BRQ5 295 aa4.53□□□□□ -1.68
CD46-215ENST00000488596 OR10A5Q9H207 317 aa4.53□□□□□ -1.68
CD46-215ENST00000488596 NELFAQ9H3P2 528 aa4.53□□□□□ -1.68
CD46-215ENST00000488596 SLC2A4RGQ9NR83 387 aa4.53□□□□□ -1.68
CD46-215ENST00000488596 SPTLC3Q9NUV7 552 aa4.53□□□□□ -1.68
CD46-215ENST00000488596 KRTAP23-1A1A580 65 aa4.52□□□□□ -1.69
CD46-215ENST00000488596 FKBP9O95302 570 aa4.52□□□□□ -1.69
CD46-215ENST00000488596 SLC9A1P19634 815 aa4.52□□□□□ -1.69
CD46-215ENST00000488596 MAKP20794 623 aa4.52□□□□□ -1.69
CD46-215ENST00000488596 CDK11BP21127 795 aaKnown RBP4.52□□□□□ -1.69
CD46-215ENST00000488596 ADCYAP1R1P41586 468 aa4.52□□□□□ -1.69
CD46-215ENST00000488596 ANAPC15P60006 121 aa4.52□□□□□ -1.69
CD46-215ENST00000488596 IL2P60568 153 aa4.52□□□□□ -1.69
CD46-215ENST00000488596 IRF9Q00978 393 aa4.52□□□□□ -1.69
CD46-215ENST00000488596 FAM50AQ14320 339 aaKnown RBP4.52□□□□□ -1.69
CD46-215ENST00000488596 DHCR24Q15392 516 aa4.52□□□□□ -1.69
CD46-215ENST00000488596 ARHGAP44Q17R89 818 aa4.52□□□□□ -1.69
CD46-215ENST00000488596 PCSK4Q6UW60 755 aa4.52□□□□□ -1.69
CD46-215ENST00000488596 FKBP9P1Q75LS8 142 aa4.52□□□□□ -1.69
CD46-215ENST00000488596 OTOP1Q7RTM1 612 aa4.52□□□□□ -1.69
CD46-215ENST00000488596 ADGRE4PQ86SQ3 457 aa4.52□□□□□ -1.69
CD46-215ENST00000488596 TMPRSS6Q8IU80 811 aa4.52□□□□□ -1.69
CD46-215ENST00000488596 NOSTRINQ8IVI9 506 aa4.52□□□□□ -1.69
CD46-215ENST00000488596 RPUSD2Q8IZ73 545 aaKnown RBP4.52□□□□□ -1.69
CD46-215ENST00000488596 D2HGDHQ8N465 521 aa4.52□□□□□ -1.69
CD46-215ENST00000488596 PRPF38AQ8NAV1 312 aaKnown RBP4.52□□□□□ -1.69
CD46-215ENST00000488596 SMC1BQ8NDV3 1235 aa4.52□□□□□ -1.69
CD46-215ENST00000488596 SHCBP1Q8NEM2 672 aa4.52□□□□□ -1.69
CD46-215ENST00000488596 PUS7Q96PZ0 661 aaKnown RBP4.52□□□□□ -1.69
CD46-215ENST00000488596 AGAP2Q99490 1192 aa4.52□□□□□ -1.69
CD46-215ENST00000488596 BRINP2Q9C0B6 783 aa4.52□□□□□ -1.69
CD46-215ENST00000488596 AURKAIP1Q9NWT8 199 aaPredicted RBP4.52□□□□□ -1.69
CD46-215ENST00000488596 OXSMQ9NWU1 459 aa4.52□□□□□ -1.69
CD46-215ENST00000488596 FAM184BQ9ULE4 1060 aa4.52□□□□□ -1.69
CD46-215ENST00000488596 GIT1Q9Y2X7 761 aa4.52□□□□□ -1.69
CD46-215ENST00000488596 TNFRSF18Q9Y5U5 241 aa4.52□□□□□ -1.69
CD46-215ENST00000488596 RASSF10A6NK89 507 aa4.51□□□□□ -1.69
CD46-215ENST00000488596 CAPN14A8MX76 684 aa4.51□□□□□ -1.69
CD46-215ENST00000488596 SLC26A4O43511 780 aa4.51□□□□□ -1.69
CD46-215ENST00000488596 ADH4P08319 380 aa4.51□□□□□ -1.69
CD46-215ENST00000488596 BPIP17213 487 aa4.51□□□□□ -1.69
CD46-215ENST00000488596 KRT4P19013 534 aa4.51□□□□□ -1.69
CD46-215ENST00000488596 HHEXQ03014 270 aa4.51□□□□□ -1.69
CD46-215ENST00000488596 RRP1BQ14684 758 aaKnown RBP4.51□□□□□ -1.69
CD46-215ENST00000488596 STAT4Q14765 748 aa4.51□□□□□ -1.69
CD46-215ENST00000488596 TMEM132BQ14DG7 1078 aa4.51□□□□□ -1.69
CD46-215ENST00000488596 ACAP1Q15027 740 aa4.51□□□□□ -1.69
CD46-215ENST00000488596 CREB3L3Q68CJ9 461 aa4.51□□□□□ -1.69
CD46-215ENST00000488596 GRAMD4Q6IC98 578 aa4.51□□□□□ -1.69
CD46-215ENST00000488596 Q6ZPA2 131 aa4.51□□□□□ -1.69
CD46-215ENST00000488596 ANKRD13AQ8IZ07 590 aa4.51□□□□□ -1.69
CD46-215ENST00000488596 BCL6BQ8N143 479 aaPredicted RBP4.51□□□□□ -1.69
CD46-215ENST00000488596 THEMISQ8N1K5 641 aaPredicted RBP4.51□□□□□ -1.69
CD46-215ENST00000488596 WDR66Q8TBY9 1149 aa4.51□□□□□ -1.69
CD46-215ENST00000488596 ASB15Q8WXK1 588 aa4.51□□□□□ -1.69
CD46-215ENST00000488596 CLIP3Q96DZ5 547 aa4.51□□□□□ -1.69
CD46-215ENST00000488596 TTC1Q99614 292 aa4.51□□□□□ -1.69
CD46-215ENST00000488596 BOCQ9BWV1 1114 aa4.51□□□□□ -1.69
CD46-215ENST00000488596 IFT22Q9H7X7 185 aa4.51□□□□□ -1.69
CD46-215ENST00000488596 SH3BP1Q9Y3L3 701 aa4.51□□□□□ -1.69
CD46-215ENST00000488596 DMRT1Q9Y5R6 373 aa4.51□□□□□ -1.69
CD46-215ENST00000488596 PRAMEF22A3QJZ6 481 aa4.5□□□□□ -1.69
CD46-215ENST00000488596 PMS2P1A4D2B8 440 aa4.5□□□□□ -1.69
CD46-215ENST00000488596 H7C1D1 291 aa4.5□□□□□ -1.69
CD46-215ENST00000488596 KPNA1P52294 538 aaPredicted RBP4.5□□□□□ -1.69
CD46-215ENST00000488596 KIF11P52732 1056 aa4.5□□□□□ -1.69
CD46-215ENST00000488596 TMPRSS15P98073 1019 aa4.5□□□□□ -1.69
CD46-215ENST00000488596 ADAM15Q13444 863 aa4.5□□□□□ -1.69
CD46-215ENST00000488596 RIN1Q13671 783 aa4.5□□□□□ -1.69
CD46-215ENST00000488596 SAFB2Q14151 953 aaKnown RBP eCLIP4.5□□□□□ -1.69
CD46-215ENST00000488596 MRGPRGQ86SM5 289 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms