RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 GFRA3O60609 400 aa21.47■■□□□ 1.03
GGPS1-206ENST00000488594 SKIP12755 728 aa21.47■■□□□ 1.03
GGPS1-206ENST00000488594 TARBP2Q15633 366 aaKnown RBP21.47■■□□□ 1.03
GGPS1-206ENST00000488594 LRCH2Q5VUJ6 765 aa21.47■■□□□ 1.03
GGPS1-206ENST00000488594 Q6ZUG5 572 aa21.47■■□□□ 1.03
GGPS1-206ENST00000488594 FBXL16Q8N461 479 aa21.47■■□□□ 1.03
GGPS1-206ENST00000488594 TMEM87AQ8NBN3 555 aa21.47■■□□□ 1.03
GGPS1-206ENST00000488594 SLC5A5Q92911 643 aa21.47■■□□□ 1.03
GGPS1-206ENST00000488594 BRF1Q92994 677 aa21.47■■□□□ 1.03
GGPS1-206ENST00000488594 TEKT3Q9BXF9 490 aa21.47■■□□□ 1.03
GGPS1-206ENST00000488594 CACNA1HO95180 2353 aa21.46■■□□□ 1.03
GGPS1-206ENST00000488594 C2CD4DB7Z1M9 353 aa21.46■■□□□ 1.03
GGPS1-206ENST00000488594 CHMP2AO43633 222 aa21.46■■□□□ 1.03
GGPS1-206ENST00000488594 CXCL14O95715 111 aa21.46■■□□□ 1.03
GGPS1-206ENST00000488594 FGFR4P22455 802 aa21.46■■□□□ 1.03
GGPS1-206ENST00000488594 SFPQP23246 707 aaKnown RBP eCLIP21.46■■□□□ 1.03
GGPS1-206ENST00000488594 CA8P35219 290 aa21.46■■□□□ 1.03
GGPS1-206ENST00000488594 DNM2P50570 870 aa21.46■■□□□ 1.03
GGPS1-206ENST00000488594 POLGP54098 1239 aaPredicted RBP21.46■■□□□ 1.03
GGPS1-206ENST00000488594 UGCGQ16739 394 aa21.46■■□□□ 1.03
GGPS1-206ENST00000488594 VPS52Q8N1B4 723 aa21.46■■□□□ 1.03
GGPS1-206ENST00000488594 PHKBQ93100 1093 aa21.46■■□□□ 1.03
GGPS1-206ENST00000488594 NIFKQ9BYG3 293 aaKnown RBP21.46■■□□□ 1.03
GGPS1-206ENST00000488594 INO80BQ9C086 356 aaPredicted RBP21.46■■□□□ 1.03
GGPS1-206ENST00000488594 FAM86C1Q9NVL1 165 aa21.46■■□□□ 1.03
GGPS1-206ENST00000488594 IRAK3Q9Y616 596 aa21.46■■□□□ 1.03
GGPS1-206ENST00000488594 GALR2O43603 387 aaPredicted RBP21.45■■□□□ 1.02
GGPS1-206ENST00000488594 CDC45O75419 566 aa21.45■■□□□ 1.02
GGPS1-206ENST00000488594 PHKA2P46019 1235 aa21.45■■□□□ 1.02
GGPS1-206ENST00000488594 XKR3Q5GH77 459 aa21.45■■□□□ 1.02
GGPS1-206ENST00000488594 ATAT1Q5SQI0 421 aa21.45■■□□□ 1.02
GGPS1-206ENST00000488594 GLB1LQ6UWU2 654 aa21.45■■□□□ 1.02
GGPS1-206ENST00000488594 ZDHHC14Q8IZN3 488 aa21.45■■□□□ 1.02
GGPS1-206ENST00000488594 PLCD3Q8N3E9 789 aa21.45■■□□□ 1.02
GGPS1-206ENST00000488594 TDRD5Q8NAT2 981 aaKnown RBP21.45■■□□□ 1.02
GGPS1-206ENST00000488594 KCNB2Q92953 911 aa21.45■■□□□ 1.02
GGPS1-206ENST00000488594 C22orf23Q9BZE7 217 aa21.45■■□□□ 1.02
GGPS1-206ENST00000488594 ZBP1Q9H171 429 aa21.45■■□□□ 1.02
GGPS1-206ENST00000488594 UNC45AQ9H3U1 944 aa21.45■■□□□ 1.02
GGPS1-206ENST00000488594 CDH22Q9UJ99 828 aa21.45■■□□□ 1.02
GGPS1-206ENST00000488594 USTQ9Y2C2 406 aa21.45■■□□□ 1.02
GGPS1-206ENST00000488594 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.44■■□□□ 1.02
GGPS1-206ENST00000488594 NT5C1B-RDH14C9J2C7 533 aa21.44■■□□□ 1.02
GGPS1-206ENST00000488594 ZC3H11AO75152 810 aaKnown RBP eCLIP21.44■■□□□ 1.02
GGPS1-206ENST00000488594 BRD1O95696 1058 aa21.44■■□□□ 1.02
GGPS1-206ENST00000488594 PDGFBP01127 241 aaPredicted RBP21.44■■□□□ 1.02
GGPS1-206ENST00000488594 CTSAP10619 480 aa21.44■■□□□ 1.02
GGPS1-206ENST00000488594 TWF2Q6IBS0 349 aaKnown RBP21.44■■□□□ 1.02
GGPS1-206ENST00000488594 KIAA1841Q6NSI8 718 aa21.44■■□□□ 1.02
GGPS1-206ENST00000488594 BLOC1S2Q6QNY1 142 aa21.44■■□□□ 1.02
GGPS1-206ENST00000488594 DDX53Q86TM3 631 aaKnown RBP21.44■■□□□ 1.02
GGPS1-206ENST00000488594 ZNF410Q86VK4 478 aa21.44■■□□□ 1.02
GGPS1-206ENST00000488594 JAKMIP1Q96N16 626 aaKnown RBP21.44■■□□□ 1.02
GGPS1-206ENST00000488594 SH3GLB2Q9NR46 395 aa21.44■■□□□ 1.02
GGPS1-206ENST00000488594 STK39Q9UEW8 545 aa21.44■■□□□ 1.02
GGPS1-206ENST00000488594 SEPT9Q9UHD8 586 aaPredicted RBP21.44■■□□□ 1.02
GGPS1-206ENST00000488594 IGKV6-21A0A0C4DH24 114 aa21.43■■□□□ 1.02
GGPS1-206ENST00000488594 H0Y858 1186 aa21.43■■□□□ 1.02
GGPS1-206ENST00000488594 CPA1P15085 419 aa21.43■■□□□ 1.02
GGPS1-206ENST00000488594 RAB27AP51159 221 aa21.43■■□□□ 1.02
GGPS1-206ENST00000488594 DRP2Q13474 957 aa21.43■■□□□ 1.02
GGPS1-206ENST00000488594 NTRK3Q16288 839 aa21.43■■□□□ 1.02
GGPS1-206ENST00000488594 RARS2Q5T160 578 aaKnown RBP21.43■■□□□ 1.02
GGPS1-206ENST00000488594 MIER3Q7Z3K6 550 aa21.43■■□□□ 1.02
GGPS1-206ENST00000488594 PPFIBP1Q86W92 1011 aa21.43■■□□□ 1.02
GGPS1-206ENST00000488594 IGSF21Q96ID5 467 aa21.43■■□□□ 1.02
GGPS1-206ENST00000488594 SNX27Q96L92 541 aa21.43■■□□□ 1.02
GGPS1-206ENST00000488594 SLC26A6Q9BXS9 759 aa21.43■■□□□ 1.02
GGPS1-206ENST00000488594 VPS54Q9P1Q0 977 aa21.43■■□□□ 1.02
GGPS1-206ENST00000488594 DBR1Q9UK59 544 aaKnown RBP21.43■■□□□ 1.02
GGPS1-206ENST00000488594 PROB1E7EW31 1015 aa21.42■■□□□ 1.02
GGPS1-206ENST00000488594 EDIL3O43854 480 aa21.42■■□□□ 1.02
GGPS1-206ENST00000488594 CSDE1O75534 798 aaKnown RBP21.42■■□□□ 1.02
GGPS1-206ENST00000488594 PSMD10O75832 226 aa21.42■■□□□ 1.02
GGPS1-206ENST00000488594 IFNAR1P17181 557 aa21.42■■□□□ 1.02
GGPS1-206ENST00000488594 NLRP5P59047 1200 aa21.42■■□□□ 1.02
GGPS1-206ENST00000488594 MTERF2Q49AM1 385 aa21.42■■□□□ 1.02
GGPS1-206ENST00000488594 Q4G0T1 1027 aa21.42■■□□□ 1.02
GGPS1-206ENST00000488594 CEP89Q96ST8 783 aa21.42■■□□□ 1.02
GGPS1-206ENST00000488594 AGXT2Q9BYV1 514 aa21.42■■□□□ 1.02
GGPS1-206ENST00000488594 PIN4Q9Y237 131 aaKnown RBP21.42■■□□□ 1.02
GGPS1-206ENST00000488594 A0A087WZ62 844 aa21.41■■□□□ 1.02
GGPS1-206ENST00000488594 ZNF623O75123 536 aa21.41■■□□□ 1.02
GGPS1-206ENST00000488594 RNASELQ05823 741 aaKnown RBP21.41■■□□□ 1.02
GGPS1-206ENST00000488594 NOMO2Q5JPE7 1267 aa21.41■■□□□ 1.02
GGPS1-206ENST00000488594 TMEM173Q86WV6 379 aaPredicted RBP21.41■■□□□ 1.02
GGPS1-206ENST00000488594 TBCKQ8TEA7 893 aa21.41■■□□□ 1.02
GGPS1-206ENST00000488594 SLC22A17Q8WUG5 538 aa21.41■■□□□ 1.02
GGPS1-206ENST00000488594 JPH2Q9BR39 696 aaPredicted RBP21.41■■□□□ 1.02
GGPS1-206ENST00000488594 FDXACB1Q9BRP7 624 aaPredicted RBP21.41■■□□□ 1.02
GGPS1-206ENST00000488594 FAM105AQ9NUU6 356 aa21.41■■□□□ 1.02
GGPS1-206ENST00000488594 TBC1D13Q9NVG8 400 aa21.41■■□□□ 1.02
GGPS1-206ENST00000488594 SUCLA2Q9P2R7 463 aaPredicted RBP21.41■■□□□ 1.02
GGPS1-206ENST00000488594 CYP3A7-CYP3A51PA0A087WV96 503 aa21.4■■□□□ 1.02
GGPS1-206ENST00000488594 GALTP07902 379 aa21.4■■□□□ 1.02
GGPS1-206ENST00000488594 EPCAMP16422 314 aa21.4■■□□□ 1.02
GGPS1-206ENST00000488594 RPS6KB1P23443 525 aa21.4■■□□□ 1.02
GGPS1-206ENST00000488594 CYP3A7P24462 503 aa21.4■■□□□ 1.02
GGPS1-206ENST00000488594 HSPA4P34932 840 aa21.4■■□□□ 1.02
GGPS1-206ENST00000488594 B3GNT9Q6UX72 402 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms