RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 MRE11P49959 708 aa5.95□□□□□ -1.46
ITGB1-214ENST00000488427 NFYCQ13952 458 aa5.95□□□□□ -1.46
ITGB1-214ENST00000488427 STAT4Q14765 748 aa5.95□□□□□ -1.46
ITGB1-214ENST00000488427 MYBPC3Q14896 1274 aa5.95□□□□□ -1.46
ITGB1-214ENST00000488427 NOLC1Q14978 699 aaKnown RBP eCLIP5.95□□□□□ -1.46
ITGB1-214ENST00000488427 PCOLCEQ15113 449 aa5.95□□□□□ -1.46
ITGB1-214ENST00000488427 GPR155Q7Z3F1 870 aa5.95□□□□□ -1.46
ITGB1-214ENST00000488427 NECAB2Q7Z6G3 386 aa5.95□□□□□ -1.46
ITGB1-214ENST00000488427 GGNQ86UU5 652 aa5.95□□□□□ -1.46
ITGB1-214ENST00000488427 CIR1Q86X95 450 aaPredicted RBP5.95□□□□□ -1.46
ITGB1-214ENST00000488427 SLC7A6OSQ96CW6 309 aaPredicted RBP5.95□□□□□ -1.46
ITGB1-214ENST00000488427 LMF1Q96S06 567 aa5.95□□□□□ -1.46
ITGB1-214ENST00000488427 NOL10Q9BSC4 688 aaKnown RBP5.95□□□□□ -1.46
ITGB1-214ENST00000488427 OSBPL6Q9BZF3 934 aa5.95□□□□□ -1.46
ITGB1-214ENST00000488427 CDC42EP3Q9UKI2 254 aa5.95□□□□□ -1.46
ITGB1-214ENST00000488427 PCDHB6Q9Y5E3 794 aa5.95□□□□□ -1.46
ITGB1-214ENST00000488427 CEP164Q9UPV0 1460 aa5.95□□□□□ -1.46
ITGB1-214ENST00000488427 DCAF1Q9Y4B6 1507 aa5.94□□□□□ -1.46
ITGB1-214ENST00000488427 A0A0A6YYJ9 748 aa5.94□□□□□ -1.46
ITGB1-214ENST00000488427 PMS2P1A4D2B8 440 aa5.94□□□□□ -1.46
ITGB1-214ENST00000488427 OPHN1O60890 802 aa5.94□□□□□ -1.46
ITGB1-214ENST00000488427 MTHFD2P13995 350 aa5.94□□□□□ -1.46
ITGB1-214ENST00000488427 RPS19P39019 145 aaKnown RBP5.94□□□□□ -1.46
ITGB1-214ENST00000488427 RRADP55042 308 aa5.94□□□□□ -1.46
ITGB1-214ENST00000488427 KRTAP10-2P60368 255 aa5.94□□□□□ -1.46
ITGB1-214ENST00000488427 TMPRSS15P98073 1019 aa5.94□□□□□ -1.46
ITGB1-214ENST00000488427 PLP2Q04941 152 aa5.94□□□□□ -1.46
ITGB1-214ENST00000488427 HS1BP3Q53T59 392 aa5.94□□□□□ -1.46
ITGB1-214ENST00000488427 FERMT3Q86UX7 667 aa5.94□□□□□ -1.46
ITGB1-214ENST00000488427 CXorf67Q86X51 503 aaPredicted RBP5.94□□□□□ -1.46
ITGB1-214ENST00000488427 GLB1L2Q8IW92 636 aa5.94□□□□□ -1.46
ITGB1-214ENST00000488427 RAX2Q96IS3 184 aa5.94□□□□□ -1.46
ITGB1-214ENST00000488427 BDH2Q9BUT1 245 aa5.94□□□□□ -1.46
ITGB1-214ENST00000488427 ADAM7Q9H2U9 754 aa5.94□□□□□ -1.46
ITGB1-214ENST00000488427 NUMBLQ9Y6R0 609 aa5.94□□□□□ -1.46
ITGB1-214ENST00000488427 KDM6BO15054 1643 aa5.94□□□□□ -1.46
ITGB1-214ENST00000488427 WASHC2AQ641Q2 1341 aa5.94□□□□□ -1.46
ITGB1-214ENST00000488427 MYPNQ86TC9 1320 aa5.94□□□□□ -1.46
ITGB1-214ENST00000488427 ALG1L2C9J202 215 aa5.93□□□□□ -1.46
ITGB1-214ENST00000488427 GPR39O43194 453 aa5.93□□□□□ -1.46
ITGB1-214ENST00000488427 ZNF888P0CJ79 500 aaPredicted RBP5.93□□□□□ -1.46
ITGB1-214ENST00000488427 SPIDRQ14159 915 aa5.93□□□□□ -1.46
ITGB1-214ENST00000488427 FAM180AQ6UWF9 173 aa5.93□□□□□ -1.46
ITGB1-214ENST00000488427 LMBR1LQ6UX01 489 aa5.93□□□□□ -1.46
ITGB1-214ENST00000488427 GIMAP8Q8ND71 665 aaPredicted RBP5.93□□□□□ -1.46
ITGB1-214ENST00000488427 BRINP2Q9C0B6 783 aa5.93□□□□□ -1.46
ITGB1-214ENST00000488427 PUS7LQ9H0K6 701 aaKnown RBP5.93□□□□□ -1.46
ITGB1-214ENST00000488427 C12orf65Q9H3J6 166 aaKnown RBP5.93□□□□□ -1.46
ITGB1-214ENST00000488427 NELFAQ9H3P2 528 aa5.93□□□□□ -1.46
ITGB1-214ENST00000488427 C14orf93Q9H972 538 aaKnown RBP5.93□□□□□ -1.46
ITGB1-214ENST00000488427 ATP8A1Q9Y2Q0 1164 aa5.93□□□□□ -1.46
ITGB1-214ENST00000488427 BAZ1BQ9UIG0 1483 aaKnown RBP5.93□□□□□ -1.46
ITGB1-214ENST00000488427 SMARCA4P51532 1647 aa5.92□□□□□ -1.46
ITGB1-214ENST00000488427 ADGRL1O94910 1474 aa5.92□□□□□ -1.46
ITGB1-214ENST00000488427 ANKRD62A6NC57 917 aa5.92□□□□□ -1.46
ITGB1-214ENST00000488427 GOLGA8BA8MQT2 603 aa5.92□□□□□ -1.46
ITGB1-214ENST00000488427 NRP1O14786 923 aa5.92□□□□□ -1.46
ITGB1-214ENST00000488427 PCDH8O95206 1070 aa5.92□□□□□ -1.46
ITGB1-214ENST00000488427 STAT5BP51692 787 aa5.92□□□□□ -1.46
ITGB1-214ENST00000488427 TBC1D10BQ4KMP7 808 aaPredicted RBP5.92□□□□□ -1.46
ITGB1-214ENST00000488427 GAGE13Q4V321 117 aa5.92□□□□□ -1.46
ITGB1-214ENST00000488427 TTC9BQ8N6N2 239 aa5.92□□□□□ -1.46
ITGB1-214ENST00000488427 OR14C36Q8NHC7 312 aa5.92□□□□□ -1.46
ITGB1-214ENST00000488427 NEIL1Q96FI4 390 aaPredicted RBP5.92□□□□□ -1.46
ITGB1-214ENST00000488427 ZNF496Q96IT1 587 aaPredicted RBP5.92□□□□□ -1.46
ITGB1-214ENST00000488427 SAMD11Q96NU1 681 aa5.92□□□□□ -1.46
ITGB1-214ENST00000488427 UIMC1Q96RL1 719 aa5.92□□□□□ -1.46
ITGB1-214ENST00000488427 SLC6A15Q9H2J7 730 aa5.92□□□□□ -1.46
ITGB1-214ENST00000488427 OAZ3Q9UMX2 235 aa5.92□□□□□ -1.46
ITGB1-214ENST00000488427 DUSP10Q9Y6W6 482 aa5.92□□□□□ -1.46
ITGB1-214ENST00000488427 CNOT4O95628 575 aaKnown RBP5.91□□□□□ -1.46
ITGB1-214ENST00000488427 EYA4O95677 639 aa5.91□□□□□ -1.46
ITGB1-214ENST00000488427 ITGB3P05106 788 aa5.91□□□□□ -1.46
ITGB1-214ENST00000488427 CR2P20023 1033 aa5.91□□□□□ -1.46
ITGB1-214ENST00000488427 MANFP55145 182 aaKnown RBP5.91□□□□□ -1.46
ITGB1-214ENST00000488427 FSCN1Q16658 493 aaKnown RBP5.91□□□□□ -1.46
ITGB1-214ENST00000488427 UGT8Q16880 541 aa5.91□□□□□ -1.46
ITGB1-214ENST00000488427 KRT40Q6A162 431 aa5.91□□□□□ -1.46
ITGB1-214ENST00000488427 STRA8Q7Z7C7 330 aa5.91□□□□□ -1.46
ITGB1-214ENST00000488427 CLRN3Q8NCR9 226 aa5.91□□□□□ -1.46
ITGB1-214ENST00000488427 CHST13Q8NET6 341 aa5.91□□□□□ -1.46
ITGB1-214ENST00000488427 AHCYL2Q96HN2 611 aaKnown RBP5.91□□□□□ -1.46
ITGB1-214ENST00000488427 LRRC37BQ96QE4 947 aa5.91□□□□□ -1.46
ITGB1-214ENST00000488427 MENTQ9BUN1 341 aa5.91□□□□□ -1.46
ITGB1-214ENST00000488427 HAPLN2Q9GZV7 340 aa5.91□□□□□ -1.46
ITGB1-214ENST00000488427 KIAA1683Q9H0B3 1180 aa5.91□□□□□ -1.46
ITGB1-214ENST00000488427 ZBTB21Q9ULJ3 1066 aa5.91□□□□□ -1.46
ITGB1-214ENST00000488427 SLC26A4O43511 780 aa5.9□□□□□ -1.46
ITGB1-214ENST00000488427 CDC14BO60729 498 aa5.9□□□□□ -1.46
ITGB1-214ENST00000488427 JUNP05412 331 aaKnown RBP5.9□□□□□ -1.46
ITGB1-214ENST00000488427 PFKMP08237 780 aa5.9□□□□□ -1.46
ITGB1-214ENST00000488427 ENPP1P22413 925 aa5.9□□□□□ -1.46
ITGB1-214ENST00000488427 MEF2AQ02078 507 aaPredicted RBP5.9□□□□□ -1.46
ITGB1-214ENST00000488427 HHEXQ03014 270 aa5.9□□□□□ -1.46
ITGB1-214ENST00000488427 SPATS1Q496A3 300 aa5.9□□□□□ -1.46
ITGB1-214ENST00000488427 CCDC62Q6P9F0 684 aa5.9□□□□□ -1.46
ITGB1-214ENST00000488427 LARP4Q71RC2 724 aaKnown RBP eCLIP5.9□□□□□ -1.46
ITGB1-214ENST00000488427 AMOTL1Q8IY63 956 aa5.9□□□□□ -1.46
ITGB1-214ENST00000488427 UNC5BQ8IZJ1 945 aa5.9□□□□□ -1.46
ITGB1-214ENST00000488427 GAB3Q8WWW8 586 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms