RNA–Protein interactions for RNA: ENST00000488363.1

MMP11-210, Transcript of matrix metallopeptidase 11, humanhuman

TSL 2

Gene MMP11, Length 549 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-210ENST00000488363 MICAL1Q8TDZ2 1067 aa20.32■□□□□ 0.84
MMP11-210ENST00000488363 SLC7A3Q8WY07 619 aa20.32■□□□□ 0.84
MMP11-210ENST00000488363 KHSRPQ92945 711 aaKnown RBP eCLIP20.32■□□□□ 0.84
MMP11-210ENST00000488363 CEP170P1Q96L14 293 aa20.32■□□□□ 0.84
MMP11-210ENST00000488363 LXNQ9BS40 222 aa20.32■□□□□ 0.84
MMP11-210ENST00000488363 INO80BQ9C086 356 aaPredicted RBP20.32■□□□□ 0.84
MMP11-210ENST00000488363 TLR9Q9NR96 1032 aa20.32■□□□□ 0.84
MMP11-210ENST00000488363 CHST12Q9NRB3 414 aa20.32■□□□□ 0.84
MMP11-210ENST00000488363 WRAP73Q9P2S5 460 aaPredicted RBP20.32■□□□□ 0.84
MMP11-210ENST00000488363 PCDHGC5Q9Y5F6 944 aa20.32■□□□□ 0.84
MMP11-210ENST00000488363 PLXNA4Q9HCM2 1894 aa20.31■□□□□ 0.84
MMP11-210ENST00000488363 EOMESO95936 686 aa20.31■□□□□ 0.84
MMP11-210ENST00000488363 NRIP1P48552 1158 aa20.31■□□□□ 0.84
MMP11-210ENST00000488363 NDUFV1P49821 464 aa20.31■□□□□ 0.84
MMP11-210ENST00000488363 FOSBP53539 338 aa20.31■□□□□ 0.84
MMP11-210ENST00000488363 POLGP54098 1239 aaPredicted RBP20.31■□□□□ 0.84
MMP11-210ENST00000488363 TRIM29Q14134 588 aa20.31■□□□□ 0.84
MMP11-210ENST00000488363 LRRC55Q6ZSA7 311 aa20.31■□□□□ 0.84
MMP11-210ENST00000488363 KSR1Q8IVT5 923 aa20.31■□□□□ 0.84
MMP11-210ENST00000488363 C4orf19Q8IY42 314 aa20.31■□□□□ 0.84
MMP11-210ENST00000488363 EXOC8Q8IYI6 725 aa20.31■□□□□ 0.84
MMP11-210ENST00000488363 EFHBQ8N7U6 833 aa20.31■□□□□ 0.84
MMP11-210ENST00000488363 NLRP4Q96MN2 994 aa20.31■□□□□ 0.84
MMP11-210ENST00000488363 RGL1Q9NZL6 768 aa20.31■□□□□ 0.84
MMP11-210ENST00000488363 PPME1Q9Y570 386 aa20.31■□□□□ 0.84
MMP11-210ENST00000488363 BTBD18B2RXH4 712 aa20.3■□□□□ 0.84
MMP11-210ENST00000488363 YWHABP31946 246 aaKnown RBP20.3■□□□□ 0.84
MMP11-210ENST00000488363 SPIRE1Q08AE8 756 aa20.3■□□□□ 0.84
MMP11-210ENST00000488363 CLLU1OSQ5K130 101 aa20.3■□□□□ 0.84
MMP11-210ENST00000488363 RBM23Q86U06 439 aaKnown RBP20.3■□□□□ 0.84
MMP11-210ENST00000488363 ZNF598Q86UK7 904 aaKnown RBP20.3■□□□□ 0.84
MMP11-210ENST00000488363 DIS3L2Q8IYB7 885 aaKnown RBP20.3■□□□□ 0.84
MMP11-210ENST00000488363 ZNF579Q8NAF0 562 aaKnown RBP20.3■□□□□ 0.84
MMP11-210ENST00000488363 DYDC2Q96IM9 177 aa20.3■□□□□ 0.84
MMP11-210ENST00000488363 DHX33Q9H6R0 707 aaKnown RBP20.3■□□□□ 0.84
MMP11-210ENST00000488363 TLE6Q9H808 572 aa20.3■□□□□ 0.84
MMP11-210ENST00000488363 PRKAG3Q9UGI9 489 aa20.3■□□□□ 0.84
MMP11-210ENST00000488363 CD207Q9UJ71 328 aa20.3■□□□□ 0.84
MMP11-210ENST00000488363 MBTPS2O43462 519 aa20.29■□□□□ 0.84
MMP11-210ENST00000488363 CENPBP07199 599 aaPredicted RBP20.29■□□□□ 0.84
MMP11-210ENST00000488363 ATF7P17544 494 aaPredicted RBP20.29■□□□□ 0.84
MMP11-210ENST00000488363 RFC5P40937 340 aa20.29■□□□□ 0.84
MMP11-210ENST00000488363 ERVFC1P60507 584 aa20.29■□□□□ 0.84
MMP11-210ENST00000488363 PLCB3Q01970 1234 aa20.29■□□□□ 0.84
MMP11-210ENST00000488363 CYP4A11Q02928 519 aa20.29■□□□□ 0.84
MMP11-210ENST00000488363 ZP2Q05996 745 aa20.29■□□□□ 0.84
MMP11-210ENST00000488363 SMAD4Q13485 552 aaKnown RBP20.29■□□□□ 0.84
MMP11-210ENST00000488363 SMAD2Q15796 467 aaKnown RBP20.29■□□□□ 0.84
MMP11-210ENST00000488363 CALCRLQ16602 461 aa20.29■□□□□ 0.84
MMP11-210ENST00000488363 TWF2Q6IBS0 349 aaKnown RBP20.29■□□□□ 0.84
MMP11-210ENST00000488363 PDE12Q6L8Q7 609 aaKnown RBP20.29■□□□□ 0.84
MMP11-210ENST00000488363 KCNT2Q6UVM3 1135 aa20.29■□□□□ 0.84
MMP11-210ENST00000488363 OTUD6AQ7L8S5 288 aa20.29■□□□□ 0.84
MMP11-210ENST00000488363 CATSPER4Q7RTX7 472 aa20.29■□□□□ 0.84
MMP11-210ENST00000488363 HELQQ8TDG4 1101 aa20.29■□□□□ 0.84
MMP11-210ENST00000488363 MRPS27Q92552 414 aaKnown RBP20.29■□□□□ 0.84
MMP11-210ENST00000488363 ZNF558Q96NG5 402 aa20.29■□□□□ 0.84
MMP11-210ENST00000488363 ZSWIM4Q9H7M6 989 aa20.29■□□□□ 0.84
MMP11-210ENST00000488363 PUF60Q9UHX1 559 aaKnown RBP20.29■□□□□ 0.84
MMP11-210ENST00000488363 PIN4Q9Y237 131 aaKnown RBP20.29■□□□□ 0.84
MMP11-210ENST00000488363 LZTS1Q9Y250 596 aa20.29■□□□□ 0.84
MMP11-210ENST00000488363 COL4A3BPQ9Y5P4 624 aa20.29■□□□□ 0.84
MMP11-210ENST00000488363 PI4K2BG5E9Z4 385 aa20.28■□□□□ 0.84
MMP11-210ENST00000488363 PPM1AP35813 382 aa20.28■□□□□ 0.84
MMP11-210ENST00000488363 PHKA2P46019 1235 aa20.28■□□□□ 0.84
MMP11-210ENST00000488363 ST3GAL1Q11201 340 aa20.28■□□□□ 0.84
MMP11-210ENST00000488363 CTTNQ14247 550 aaKnown RBP20.28■□□□□ 0.84
MMP11-210ENST00000488363 TPH2Q8IWU9 490 aa20.28■□□□□ 0.84
MMP11-210ENST00000488363 ADHFE1Q8IWW8 467 aa20.28■□□□□ 0.84
MMP11-210ENST00000488363 PSPC1Q8WXF1 523 aaKnown RBP20.28■□□□□ 0.84
MMP11-210ENST00000488363 TMEM143Q96AN5 459 aa20.28■□□□□ 0.84
MMP11-210ENST00000488363 MSLNLQ96KJ4 702 aa20.28■□□□□ 0.84
MMP11-210ENST00000488363 TRAIPQ9BWF2 469 aa20.28■□□□□ 0.84
MMP11-210ENST00000488363 IFT122Q9HBG6 1241 aa20.28■□□□□ 0.84
MMP11-210ENST00000488363 BMP2KQ9NSY1 1161 aaPredicted RBP20.28■□□□□ 0.84
MMP11-210ENST00000488363 PCDHA12Q9UN75 941 aa20.28■□□□□ 0.84
MMP11-210ENST00000488363 FSCN2O14926 492 aa20.27■□□□□ 0.84
MMP11-210ENST00000488363 PER2O15055 1255 aa20.27■□□□□ 0.84
MMP11-210ENST00000488363 GAS2O43903 313 aaKnown RBP20.27■□□□□ 0.84
MMP11-210ENST00000488363 SKIP12755 728 aa20.27■□□□□ 0.84
MMP11-210ENST00000488363 PBX3P40426 434 aa20.27■□□□□ 0.84
MMP11-210ENST00000488363 XKR9Q5GH70 373 aa20.27■□□□□ 0.84
MMP11-210ENST00000488363 PRPF31Q8WWY3 499 aaKnown RBP20.27■□□□□ 0.84
MMP11-210ENST00000488363 EIF2AK1Q9BQI3 630 aaKnown RBP20.27■□□□□ 0.84
MMP11-210ENST00000488363 MRPL9Q9BYD2 267 aaKnown RBP20.27■□□□□ 0.84
MMP11-210ENST00000488363 SPG21Q9NZD8 308 aa20.27■□□□□ 0.84
MMP11-210ENST00000488363 CLEC1BQ9P126 229 aa20.27■□□□□ 0.84
MMP11-210ENST00000488363 LIMCH1Q9UPQ0 1083 aa20.27■□□□□ 0.84
MMP11-210ENST00000488363 ZBTB39O15060 712 aa20.26■□□□□ 0.83
MMP11-210ENST00000488363 NEMFO60524 1076 aa20.26■□□□□ 0.83
MMP11-210ENST00000488363 SLITRK3O94933 977 aa20.26■□□□□ 0.83
MMP11-210ENST00000488363 GLP2RO95838 553 aa20.26■□□□□ 0.83
MMP11-210ENST00000488363 SRGAP2CP0DJJ0 459 aa20.26■□□□□ 0.83
MMP11-210ENST00000488363 KRT17Q04695 432 aa20.26■□□□□ 0.83
MMP11-210ENST00000488363 LAMTOR4Q0VGL1 99 aa20.26■□□□□ 0.83
MMP11-210ENST00000488363 EMC2Q15006 297 aa20.26■□□□□ 0.83
MMP11-210ENST00000488363 TMEM31Q5JXX7 168 aa20.26■□□□□ 0.83
MMP11-210ENST00000488363 PLPP4Q5VZY2 271 aa20.26■□□□□ 0.83
MMP11-210ENST00000488363 TCP11Q8WWU5 503 aa20.26■□□□□ 0.83
MMP11-210ENST00000488363 CDCA3Q99618 268 aaPredicted RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms