RNA–Protein interactions for RNA: ENST00000488311.1

PLD3-213, Transcript of phospholipase D family member 3, humanhuman

TSL 2

Gene PLD3, Length 750 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLD3-213ENST00000488311 ZNF598Q86UK7 904 aaKnown RBP13.76□□□□□ -0.21
PLD3-213ENST00000488311 COLGALT1Q8NBJ5 622 aa13.76□□□□□ -0.21
PLD3-213ENST00000488311 RNF169Q8NCN4 708 aa13.76□□□□□ -0.21
PLD3-213ENST00000488311 LPPQ93052 612 aa13.76□□□□□ -0.21
PLD3-213ENST00000488311 P2RX5Q93086 422 aa13.76□□□□□ -0.21
PLD3-213ENST00000488311 PABPC5Q96DU9 382 aaKnown RBP13.76□□□□□ -0.21
PLD3-213ENST00000488311 MTMR9Q96QG7 549 aa13.76□□□□□ -0.21
PLD3-213ENST00000488311 EIF2AK1Q9BQI3 630 aaKnown RBP13.76□□□□□ -0.21
PLD3-213ENST00000488311 PLVAPQ9BX97 442 aa13.76□□□□□ -0.21
PLD3-213ENST00000488311 DHX33Q9H6R0 707 aaKnown RBP13.76□□□□□ -0.21
PLD3-213ENST00000488311 ATP6V0A4Q9HBG4 840 aa13.76□□□□□ -0.21
PLD3-213ENST00000488311 IFT122Q9HBG6 1241 aa13.76□□□□□ -0.21
PLD3-213ENST00000488311 XPNPEP1Q9NQW7 623 aa13.76□□□□□ -0.21
PLD3-213ENST00000488311 CLDND1Q9NY35 253 aa13.76□□□□□ -0.21
PLD3-213ENST00000488311 RWDD3Q9Y3V2 267 aa13.76□□□□□ -0.21
PLD3-213ENST00000488311 NEMFO60524 1076 aa13.75□□□□□ -0.21
PLD3-213ENST00000488311 TXKP42681 527 aa13.75□□□□□ -0.21
PLD3-213ENST00000488311 TPH2Q8IWU9 490 aa13.75□□□□□ -0.21
PLD3-213ENST00000488311 C4orf19Q8IY42 314 aa13.75□□□□□ -0.21
PLD3-213ENST00000488311 HELQQ8TDG4 1101 aa13.75□□□□□ -0.21
PLD3-213ENST00000488311 LMAN2LQ9H0V9 348 aa13.75□□□□□ -0.21
PLD3-213ENST00000488311 IGFLR1Q9H665 355 aa13.75□□□□□ -0.21
PLD3-213ENST00000488311 ELAC1Q9H777 363 aaKnown RBP13.75□□□□□ -0.21
PLD3-213ENST00000488311 TTC12Q9H892 705 aaPredicted RBP13.75□□□□□ -0.21
PLD3-213ENST00000488311 BRMS1Q9HCU9 246 aa13.75□□□□□ -0.21
PLD3-213ENST00000488311 RAPGEFL1Q9UHV5 662 aa13.75□□□□□ -0.21
PLD3-213ENST00000488311 A0A0U1RQF3 1178 aa13.74□□□□□ -0.21
PLD3-213ENST00000488311 MARCH6O60337 910 aa13.74□□□□□ -0.21
PLD3-213ENST00000488311 B4GALT3O60512 393 aa13.74□□□□□ -0.21
PLD3-213ENST00000488311 GLP2RO95838 553 aa13.74□□□□□ -0.21
PLD3-213ENST00000488311 MCM7P33993 719 aa13.74□□□□□ -0.21
PLD3-213ENST00000488311 POLGP54098 1239 aaPredicted RBP13.74□□□□□ -0.21
PLD3-213ENST00000488311 ERVFC1P60507 584 aa13.74□□□□□ -0.21
PLD3-213ENST00000488311 EMC2Q15006 297 aa13.74□□□□□ -0.21
PLD3-213ENST00000488311 ODR4Q5SWX8 454 aa13.74□□□□□ -0.21
PLD3-213ENST00000488311 SPOUT1Q5T280 376 aaKnown RBP13.74□□□□□ -0.21
PLD3-213ENST00000488311 PTCRAQ6ISU1 281 aaPredicted RBP13.74□□□□□ -0.21
PLD3-213ENST00000488311 RBM23Q86U06 439 aaKnown RBP13.74□□□□□ -0.21
PLD3-213ENST00000488311 SLFN12Q8IYM2 578 aa13.74□□□□□ -0.21
PLD3-213ENST00000488311 VN1R2Q8NFZ6 395 aa13.74□□□□□ -0.21
PLD3-213ENST00000488311 PRPF31Q8WWY3 499 aaKnown RBP13.74□□□□□ -0.21
PLD3-213ENST00000488311 C8orf76Q96K31 380 aa13.74□□□□□ -0.21
PLD3-213ENST00000488311 HSD17B14Q9BPX1 270 aa13.74□□□□□ -0.21
PLD3-213ENST00000488311 GCOM2Q9BZD3 368 aaPredicted RBP13.74□□□□□ -0.21
PLD3-213ENST00000488311 TMEM117Q9H0C3 514 aa13.74□□□□□ -0.21
PLD3-213ENST00000488311 PIN4Q9Y237 131 aaKnown RBP13.74□□□□□ -0.21
PLD3-213ENST00000488311 COL4A3BPQ9Y5P4 624 aa13.74□□□□□ -0.21
PLD3-213ENST00000488311 GRXCR2A6NFK2 248 aa13.73□□□□□ -0.21
PLD3-213ENST00000488311 PER2O15055 1255 aa13.73□□□□□ -0.21
PLD3-213ENST00000488311 FGF18O76093 207 aa13.73□□□□□ -0.21
PLD3-213ENST00000488311 SRGAP2CP0DJJ0 459 aa13.73□□□□□ -0.21
PLD3-213ENST00000488311 SPATA31C1P0DKV0 1188 aa13.73□□□□□ -0.21
PLD3-213ENST00000488311 ZSCAN20P17040 1043 aaPredicted RBP13.73□□□□□ -0.21
PLD3-213ENST00000488311 PHKA2P46019 1235 aa13.73□□□□□ -0.21
PLD3-213ENST00000488311 RBM25P49756 843 aaKnown RBP13.73□□□□□ -0.21
PLD3-213ENST00000488311 AFF1P51825 1210 aaKnown RBP13.73□□□□□ -0.21
PLD3-213ENST00000488311 LAMTOR4Q0VGL1 99 aa13.73□□□□□ -0.21
PLD3-213ENST00000488311 TRIM29Q14134 588 aa13.73□□□□□ -0.21
PLD3-213ENST00000488311 ZNF174Q15697 407 aa13.73□□□□□ -0.21
PLD3-213ENST00000488311 XKR9Q5GH70 373 aa13.73□□□□□ -0.21
PLD3-213ENST00000488311 ZNF410Q86VK4 478 aa13.73□□□□□ -0.21
PLD3-213ENST00000488311 TMEM173Q86WV6 379 aaPredicted RBP13.73□□□□□ -0.21
PLD3-213ENST00000488311 ASAP3Q8TDY4 903 aa13.73□□□□□ -0.21
PLD3-213ENST00000488311 PIGOQ8TEQ8 1089 aa13.73□□□□□ -0.21
PLD3-213ENST00000488311 NAP1L4Q99733 375 aaKnown RBP13.73□□□□□ -0.21
PLD3-213ENST00000488311 EPHX3Q9H6B9 360 aa13.73□□□□□ -0.21
PLD3-213ENST00000488311 ZSWIM4Q9H7M6 989 aa13.73□□□□□ -0.21
PLD3-213ENST00000488311 PCDHA12Q9UN75 941 aa13.73□□□□□ -0.21
PLD3-213ENST00000488311 NT5C1B-RDH14C9J2C7 533 aa13.72□□□□□ -0.21
PLD3-213ENST00000488311 MED24O75448 989 aa13.72□□□□□ -0.21
PLD3-213ENST00000488311 BAG4O95429 457 aaKnown RBP13.72□□□□□ -0.21
PLD3-213ENST00000488311 HOXA11P31270 313 aaPredicted RBP13.72□□□□□ -0.21
PLD3-213ENST00000488311 NRIP1P48552 1158 aa13.72□□□□□ -0.21
PLD3-213ENST00000488311 DNM2P50570 870 aa13.72□□□□□ -0.21
PLD3-213ENST00000488311 NAALADL2Q58DX5 795 aa13.72□□□□□ -0.21
PLD3-213ENST00000488311 UBXN11Q5T124 520 aa13.72□□□□□ -0.21
PLD3-213ENST00000488311 CATSPER4Q7RTX7 472 aa13.72□□□□□ -0.21
PLD3-213ENST00000488311 FERMT3Q86UX7 667 aa13.72□□□□□ -0.21
PLD3-213ENST00000488311 FAM178BQ8IXR5 827 aa13.72□□□□□ -0.21
PLD3-213ENST00000488311 THNSL1Q8IYQ7 743 aa13.72□□□□□ -0.21
PLD3-213ENST00000488311 RNF149Q8NC42 400 aa13.72□□□□□ -0.21
PLD3-213ENST00000488311 FBXO18Q8NFZ0 1043 aa13.72□□□□□ -0.21
PLD3-213ENST00000488311 SLC7A3Q8WY07 619 aa13.72□□□□□ -0.21
PLD3-213ENST00000488311 AGPAT5Q9NUQ2 364 aa13.72□□□□□ -0.21
PLD3-213ENST00000488311 CLEC1BQ9P126 229 aa13.72□□□□□ -0.21
PLD3-213ENST00000488311 BARX2Q9UMQ3 279 aaPredicted RBP13.72□□□□□ -0.21
PLD3-213ENST00000488311 TRIOO75962 3097 aa13.71□□□□□ -0.21
PLD3-213ENST00000488311 FSCN2O14926 492 aa13.71□□□□□ -0.21
PLD3-213ENST00000488311 SFPQP23246 707 aaKnown RBP eCLIP13.71□□□□□ -0.21
PLD3-213ENST00000488311 RFC5P40937 340 aa13.71□□□□□ -0.21
PLD3-213ENST00000488311 RARRES1P49788 294 aa13.71□□□□□ -0.21
PLD3-213ENST00000488311 ADAM15Q13444 863 aa13.71□□□□□ -0.21
PLD3-213ENST00000488311 ECM1Q16610 540 aa13.71□□□□□ -0.21
PLD3-213ENST00000488311 PLPP4Q5VZY2 271 aa13.71□□□□□ -0.21
PLD3-213ENST00000488311 TWF2Q6IBS0 349 aaKnown RBP13.71□□□□□ -0.21
PLD3-213ENST00000488311 KCNT2Q6UVM3 1135 aa13.71□□□□□ -0.21
PLD3-213ENST00000488311 LRRC43Q8N309 656 aa13.71□□□□□ -0.21
PLD3-213ENST00000488311 BCL7CQ8WUZ0 217 aaPredicted RBP13.71□□□□□ -0.21
PLD3-213ENST00000488311 PSPC1Q8WXF1 523 aaKnown RBP13.71□□□□□ -0.21
PLD3-213ENST00000488311 MTRQ99707 1265 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms