RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 SKIDA1Q1XH10 827 aa4.01□□□□□ -1.77
R3HDM1-219ENST00000488035 PAN2Q504Q3 1202 aaKnown RBP4.01□□□□□ -1.77
R3HDM1-219ENST00000488035 PHF19Q5T6S3 580 aa4.01□□□□□ -1.77
R3HDM1-219ENST00000488035 PCSK4Q6UW60 755 aa4.01□□□□□ -1.77
R3HDM1-219ENST00000488035 NLGN4XQ8N0W4 816 aa4.01□□□□□ -1.77
R3HDM1-219ENST00000488035 STPG3Q8N7X2 389 aa4.01□□□□□ -1.77
R3HDM1-219ENST00000488035 WDR66Q8TBY9 1149 aa4.01□□□□□ -1.77
R3HDM1-219ENST00000488035 OR14A2Q96R54 314 aa4.01□□□□□ -1.77
R3HDM1-219ENST00000488035 PDGFDQ9GZP0 370 aaPredicted RBP4.01□□□□□ -1.77
R3HDM1-219ENST00000488035 PHLDB1Q86UU1 1377 aa4.01□□□□□ -1.77
R3HDM1-219ENST00000488035 TMEM191CA6NGB0 347 aa4□□□□□ -1.77
R3HDM1-219ENST00000488035 KATNA1O75449 491 aa4□□□□□ -1.77
R3HDM1-219ENST00000488035 PRKD3O94806 890 aa4□□□□□ -1.77
R3HDM1-219ENST00000488035 FAHP16930 419 aa4□□□□□ -1.77
R3HDM1-219ENST00000488035 IBSPP21815 317 aaPredicted RBP4□□□□□ -1.77
R3HDM1-219ENST00000488035 POLD1P28340 1107 aa4□□□□□ -1.77
R3HDM1-219ENST00000488035 HIBADHP31937 336 aaKnown RBP4□□□□□ -1.77
R3HDM1-219ENST00000488035 MC4RP32245 332 aa4□□□□□ -1.77
R3HDM1-219ENST00000488035 GLRBP48167 497 aa4□□□□□ -1.77
R3HDM1-219ENST00000488035 KPNA1P52294 538 aaPredicted RBP4□□□□□ -1.77
R3HDM1-219ENST00000488035 HHEXQ03014 270 aa4□□□□□ -1.77
R3HDM1-219ENST00000488035 SART3Q15020 963 aaKnown RBP4□□□□□ -1.77
R3HDM1-219ENST00000488035 ATP13A4Q4VNC1 1196 aa4□□□□□ -1.77
R3HDM1-219ENST00000488035 CMIPQ8IY22 773 aa4□□□□□ -1.77
R3HDM1-219ENST00000488035 ULK2Q8IYT8 1036 aa4□□□□□ -1.77
R3HDM1-219ENST00000488035 CLRN3Q8NCR9 226 aa4□□□□□ -1.77
R3HDM1-219ENST00000488035 ASB15Q8WXK1 588 aa4□□□□□ -1.77
R3HDM1-219ENST00000488035 SCYL1Q96KG9 808 aa4□□□□□ -1.77
R3HDM1-219ENST00000488035 CCDC8Q9H0W5 538 aaPredicted RBP4□□□□□ -1.77
R3HDM1-219ENST00000488035 C12orf65Q9H3J6 166 aaKnown RBP4□□□□□ -1.77
R3HDM1-219ENST00000488035 ZMAT4Q9H898 229 aa4□□□□□ -1.77
R3HDM1-219ENST00000488035 KCNH7Q9NS40 1196 aa4□□□□□ -1.77
R3HDM1-219ENST00000488035 BTBD7Q9P203 1132 aa4□□□□□ -1.77
R3HDM1-219ENST00000488035 MCM8Q9UJA3 840 aa4□□□□□ -1.77
R3HDM1-219ENST00000488035 REXO2Q9Y3B8 237 aaKnown RBP4□□□□□ -1.77
R3HDM1-219ENST00000488035 NR2E1Q9Y466 385 aa4□□□□□ -1.77
R3HDM1-219ENST00000488035 SPO11Q9Y5K1 396 aa4□□□□□ -1.77
R3HDM1-219ENST00000488035 BRINP1O60477 761 aa3.99□□□□□ -1.77
R3HDM1-219ENST00000488035 HIP1RO75146 1068 aa3.99□□□□□ -1.77
R3HDM1-219ENST00000488035 MPIG6BO95866 241 aa3.99□□□□□ -1.77
R3HDM1-219ENST00000488035 PEX11BO96011 259 aa3.99□□□□□ -1.77
R3HDM1-219ENST00000488035 ZNF888P0CJ79 500 aaPredicted RBP3.99□□□□□ -1.77
R3HDM1-219ENST00000488035 SDHAP31040 664 aa3.99□□□□□ -1.77
R3HDM1-219ENST00000488035 ANAPC15P60006 121 aa3.99□□□□□ -1.77
R3HDM1-219ENST00000488035 SMAD3P84022 425 aaKnown RBP3.99□□□□□ -1.77
R3HDM1-219ENST00000488035 MTMR1Q13613 665 aa3.99□□□□□ -1.77
R3HDM1-219ENST00000488035 TERF2Q15554 542 aa3.99□□□□□ -1.77
R3HDM1-219ENST00000488035 BRDTQ58F21 947 aaPredicted RBP3.99□□□□□ -1.77
R3HDM1-219ENST00000488035 BROXQ5VW32 411 aa3.99□□□□□ -1.77
R3HDM1-219ENST00000488035 CD276Q5ZPR3 534 aa3.99□□□□□ -1.77
R3HDM1-219ENST00000488035 CC2D1AQ6P1N0 951 aaPredicted RBP3.99□□□□□ -1.77
R3HDM1-219ENST00000488035 DPP8Q6V1X1 898 aaPredicted RBP3.99□□□□□ -1.77
R3HDM1-219ENST00000488035 EP400NLQ6ZTU2 488 aa3.99□□□□□ -1.77
R3HDM1-219ENST00000488035 ANKRD13AQ8IZ07 590 aa3.99□□□□□ -1.77
R3HDM1-219ENST00000488035 EFHBQ8N7U6 833 aa3.99□□□□□ -1.77
R3HDM1-219ENST00000488035 RTF1Q92541 710 aaKnown RBP3.99□□□□□ -1.77
R3HDM1-219ENST00000488035 FOXRED1Q96CU9 486 aaPredicted RBP3.99□□□□□ -1.77
R3HDM1-219ENST00000488035 CLIP3Q96DZ5 547 aa3.99□□□□□ -1.77
R3HDM1-219ENST00000488035 C16orf92Q96LL3 132 aa3.99□□□□□ -1.77
R3HDM1-219ENST00000488035 DPYSL5Q9BPU6 564 aa3.99□□□□□ -1.77
R3HDM1-219ENST00000488035 PLA2G12BQ9BX93 195 aa3.99□□□□□ -1.77
R3HDM1-219ENST00000488035 PCIF1Q9H4Z3 704 aa3.99□□□□□ -1.77
R3HDM1-219ENST00000488035 SLC39A2Q9NP94 309 aa3.99□□□□□ -1.77
R3HDM1-219ENST00000488035 TOMM22Q9NS69 142 aa3.99□□□□□ -1.77
R3HDM1-219ENST00000488035 PARPBPQ9NWS1 579 aa3.99□□□□□ -1.77
R3HDM1-219ENST00000488035 DDX56Q9NY93 547 aaKnown RBP3.99□□□□□ -1.77
R3HDM1-219ENST00000488035 APOBEC2Q9Y235 224 aaKnown RBP3.99□□□□□ -1.77
R3HDM1-219ENST00000488035 PTPN22Q9Y2R2 807 aa3.99□□□□□ -1.77
R3HDM1-219ENST00000488035 KRTAP29-1A8MX34 341 aaPredicted RBP3.98□□□□□ -1.77
R3HDM1-219ENST00000488035 FOXP2O15409 715 aa3.98□□□□□ -1.77
R3HDM1-219ENST00000488035 ZEB2O60315 1214 aa3.98□□□□□ -1.77
R3HDM1-219ENST00000488035 RAB11FIP3O75154 756 aa3.98□□□□□ -1.77
R3HDM1-219ENST00000488035 BMP5P22003 454 aa3.98□□□□□ -1.77
R3HDM1-219ENST00000488035 AOAHP28039 575 aa3.98□□□□□ -1.77
R3HDM1-219ENST00000488035 GJA4P35212 333 aa3.98□□□□□ -1.77
R3HDM1-219ENST00000488035 GUCY2FP51841 1108 aa3.98□□□□□ -1.77
R3HDM1-219ENST00000488035 KRTAP10-11P60412 298 aa3.98□□□□□ -1.77
R3HDM1-219ENST00000488035 PFKPQ01813 784 aa3.98□□□□□ -1.77
R3HDM1-219ENST00000488035 DBPQ10586 325 aaPredicted RBP3.98□□□□□ -1.77
R3HDM1-219ENST00000488035 ZNF174Q15697 407 aa3.98□□□□□ -1.77
R3HDM1-219ENST00000488035 DDB1Q16531 1140 aa3.98□□□□□ -1.77
R3HDM1-219ENST00000488035 CCDC142Q17RM4 750 aa3.98□□□□□ -1.77
R3HDM1-219ENST00000488035 RNF151Q2KHN1 245 aa3.98□□□□□ -1.77
R3HDM1-219ENST00000488035 ZNF627Q7L945 461 aa3.98□□□□□ -1.77
R3HDM1-219ENST00000488035 HDGFL2Q7Z4V5 671 aaPredicted RBP3.98□□□□□ -1.77
R3HDM1-219ENST00000488035 RTN4RL1Q86UN2 441 aaPredicted RBP3.98□□□□□ -1.77
R3HDM1-219ENST00000488035 SPATS2Q86XZ4 545 aaKnown RBP3.98□□□□□ -1.77
R3HDM1-219ENST00000488035 THEMISQ8N1K5 641 aaPredicted RBP3.98□□□□□ -1.77
R3HDM1-219ENST00000488035 ZNF808Q8N4W9 903 aaPredicted RBP3.98□□□□□ -1.77
R3HDM1-219ENST00000488035 CNTD1Q8N815 330 aa3.98□□□□□ -1.77
R3HDM1-219ENST00000488035 ERCC4Q92889 916 aaPredicted RBP3.98□□□□□ -1.77
R3HDM1-219ENST00000488035 SLC5A5Q92911 643 aa3.98□□□□□ -1.77
R3HDM1-219ENST00000488035 HOMER2Q9NSB8 354 aa3.98□□□□□ -1.77
R3HDM1-219ENST00000488035 UCKL1Q9NWZ5 548 aa3.98□□□□□ -1.77
R3HDM1-219ENST00000488035 SLC5A4Q9NY91 659 aa3.98□□□□□ -1.77
R3HDM1-219ENST00000488035 PUF60Q9UHX1 559 aaKnown RBP3.98□□□□□ -1.77
R3HDM1-219ENST00000488035 WASHC2CQ9Y4E1 1318 aa3.97□□□□□ -1.77
R3HDM1-219ENST00000488035 ZNF839A8K0R7 811 aa3.97□□□□□ -1.77
R3HDM1-219ENST00000488035 CYP27B1O15528 508 aa3.97□□□□□ -1.77
R3HDM1-219ENST00000488035 PDGFRBP09619 1106 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms