RNA–Protein interactions for RNA: ENST00000488017.1

SMC4-220, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-220ENST00000488017 OVCH1Q7RTY7 1134 aa5.37□□□□□ -1.55
SMC4-220ENST00000488017 MB21D1Q8N884 522 aa5.37□□□□□ -1.55
SMC4-220ENST00000488017 ARL8AQ96BM9 186 aa5.37□□□□□ -1.55
SMC4-220ENST00000488017 PGBD4Q96DM1 585 aa5.37□□□□□ -1.55
SMC4-220ENST00000488017 GMLQ99445 158 aa5.37□□□□□ -1.55
SMC4-220ENST00000488017 SYNPO2LQ9H987 977 aa5.37□□□□□ -1.55
SMC4-220ENST00000488017 TRIM24O15164 1050 aa5.36□□□□□ -1.55
SMC4-220ENST00000488017 RECQL4O94761 1208 aa5.36□□□□□ -1.55
SMC4-220ENST00000488017 FNTBP49356 437 aa5.36□□□□□ -1.55
SMC4-220ENST00000488017 ANTXR2P58335 489 aa5.36□□□□□ -1.55
SMC4-220ENST00000488017 ROM1Q03395 351 aa5.36□□□□□ -1.55
SMC4-220ENST00000488017 TIGD2Q4W5G0 525 aa5.36□□□□□ -1.55
SMC4-220ENST00000488017 FOXB2Q5VYV0 432 aa5.36□□□□□ -1.55
SMC4-220ENST00000488017 KRT40Q6A162 431 aa5.36□□□□□ -1.55
SMC4-220ENST00000488017 CC2D1AQ6P1N0 951 aaPredicted RBP5.36□□□□□ -1.55
SMC4-220ENST00000488017 APBB1IPQ7Z5R6 666 aaPredicted RBP5.36□□□□□ -1.55
SMC4-220ENST00000488017 SLC43A3Q8NBI5 491 aa5.36□□□□□ -1.55
SMC4-220ENST00000488017 ST8SIA2Q92186 375 aa5.36□□□□□ -1.55
SMC4-220ENST00000488017 ERCC4Q92889 916 aaPredicted RBP5.36□□□□□ -1.55
SMC4-220ENST00000488017 C16orf92Q96LL3 132 aa5.36□□□□□ -1.55
SMC4-220ENST00000488017 CYP4F11Q9HBI6 524 aa5.36□□□□□ -1.55
SMC4-220ENST00000488017 KCMF1Q9P0J7 381 aa5.36□□□□□ -1.55
SMC4-220ENST00000488017 MAGEL2Q9UJ55 1249 aa5.36□□□□□ -1.55
SMC4-220ENST00000488017 MSRB2Q9Y3D2 182 aa5.36□□□□□ -1.55
SMC4-220ENST00000488017 COX11Q9Y6N1 276 aa5.36□□□□□ -1.55
SMC4-220ENST00000488017 EFCAB14O75071 495 aa5.35□□□□□ -1.55
SMC4-220ENST00000488017 TOX4O94842 621 aa5.35□□□□□ -1.55
SMC4-220ENST00000488017 NPTXRO95502 500 aa5.35□□□□□ -1.55
SMC4-220ENST00000488017 PRLP01236 227 aa5.35□□□□□ -1.55
SMC4-220ENST00000488017 CDK4P11802 303 aa5.35□□□□□ -1.55
SMC4-220ENST00000488017 ZNF37AP17032 561 aaPredicted RBP5.35□□□□□ -1.55
SMC4-220ENST00000488017 GNAT2P19087 354 aa5.35□□□□□ -1.55
SMC4-220ENST00000488017 SPIDRQ14159 915 aa5.35□□□□□ -1.55
SMC4-220ENST00000488017 LONRF2Q1L5Z9 754 aa5.35□□□□□ -1.55
SMC4-220ENST00000488017 PAPD7Q5XG87 772 aaKnown RBP5.35□□□□□ -1.55
SMC4-220ENST00000488017 BEND2Q8NDZ0 799 aa5.35□□□□□ -1.55
SMC4-220ENST00000488017 WDR92Q96MX6 357 aa5.35□□□□□ -1.55
SMC4-220ENST00000488017 DHRS4Q9BTZ2 278 aa5.35□□□□□ -1.55
SMC4-220ENST00000488017 TRIM55Q9BYV6 548 aa5.35□□□□□ -1.55
SMC4-220ENST00000488017 SORCS3Q9UPU3 1222 aa5.35□□□□□ -1.55
SMC4-220ENST00000488017 PDPK1O15530 556 aa5.34□□□□□ -1.55
SMC4-220ENST00000488017 DAPK3O43293 454 aa5.34□□□□□ -1.55
SMC4-220ENST00000488017 RASGRP1O95267 797 aa5.34□□□□□ -1.55
SMC4-220ENST00000488017 NPEPPSP55786 919 aa5.34□□□□□ -1.55
SMC4-220ENST00000488017 SSRP1Q08945 709 aaKnown RBP5.34□□□□□ -1.55
SMC4-220ENST00000488017 RASGRF1Q13972 1273 aa5.34□□□□□ -1.55
SMC4-220ENST00000488017 NBPF6Q5VWK0 638 aa5.34□□□□□ -1.55
SMC4-220ENST00000488017 CMTM4Q8IZR5 234 aa5.34□□□□□ -1.55
SMC4-220ENST00000488017 CPT1CQ8TCG5 803 aa5.34□□□□□ -1.55
SMC4-220ENST00000488017 EXOC2Q96KP1 924 aa5.34□□□□□ -1.55
SMC4-220ENST00000488017 NBPF4Q96M43 638 aa5.34□□□□□ -1.55
SMC4-220ENST00000488017 C14orf93Q9H972 538 aaKnown RBP5.34□□□□□ -1.55
SMC4-220ENST00000488017 POLR3BQ9NW08 1133 aaPredicted RBP5.34□□□□□ -1.55
SMC4-220ENST00000488017 COQ6Q9Y2Z9 468 aa5.34□□□□□ -1.55
SMC4-220ENST00000488017 KIAA0355O15063 1070 aa5.33□□□□□ -1.56
SMC4-220ENST00000488017 MTSS1O43312 755 aa5.33□□□□□ -1.56
SMC4-220ENST00000488017 GYPEP15421 78 aa5.33□□□□□ -1.56
SMC4-220ENST00000488017 LAG3P18627 525 aa5.33□□□□□ -1.56
SMC4-220ENST00000488017 RGS3P49796 1198 aa5.33□□□□□ -1.56
SMC4-220ENST00000488017 IRF9Q00978 393 aa5.33□□□□□ -1.56
SMC4-220ENST00000488017 SLC6A3Q01959 620 aa5.33□□□□□ -1.56
SMC4-220ENST00000488017 MTERF2Q49AM1 385 aa5.33□□□□□ -1.56
SMC4-220ENST00000488017 ZC3H12BQ5HYM0 836 aaKnown RBP5.33□□□□□ -1.56
SMC4-220ENST00000488017 METTL24Q5JXM2 366 aa5.33□□□□□ -1.56
SMC4-220ENST00000488017 BMP8AQ7Z5Y6 402 aa5.33□□□□□ -1.56
SMC4-220ENST00000488017 GSTCDQ8NEC7 633 aa5.33□□□□□ -1.56
SMC4-220ENST00000488017 MYEOVQ96EZ4 313 aa5.33□□□□□ -1.56
SMC4-220ENST00000488017 DYDC2Q96IM9 177 aa5.33□□□□□ -1.56
SMC4-220ENST00000488017 MAML3Q96JK9 1138 aa5.33□□□□□ -1.56
SMC4-220ENST00000488017 HAPLN2Q9GZV7 340 aa5.33□□□□□ -1.56
SMC4-220ENST00000488017 MRPS23Q9Y3D9 190 aaKnown RBP5.33□□□□□ -1.56
SMC4-220ENST00000488017 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.32□□□□□ -1.56
SMC4-220ENST00000488017 PROB1E7EW31 1015 aa5.32□□□□□ -1.56
SMC4-220ENST00000488017 ZBTB48P10074 688 aaPredicted RBP5.32□□□□□ -1.56
SMC4-220ENST00000488017 ZFP36P26651 326 aaKnown RBP5.32□□□□□ -1.56
SMC4-220ENST00000488017 KIR2DL3P43628 341 aa5.32□□□□□ -1.56
SMC4-220ENST00000488017 CLK3P49761 638 aaKnown RBP5.32□□□□□ -1.56
SMC4-220ENST00000488017 USP14P54578 494 aa5.32□□□□□ -1.56
SMC4-220ENST00000488017 EPHA10Q5JZY3 1008 aa5.32□□□□□ -1.56
SMC4-220ENST00000488017 SLFN12LQ6IEE8 588 aa5.32□□□□□ -1.56
SMC4-220ENST00000488017 Q6YL49 198 aa5.32□□□□□ -1.56
SMC4-220ENST00000488017 OTOP1Q7RTM1 612 aa5.32□□□□□ -1.56
SMC4-220ENST00000488017 CXorf67Q86X51 503 aaPredicted RBP5.32□□□□□ -1.56
SMC4-220ENST00000488017 C2orf69Q8N8R5 385 aa5.32□□□□□ -1.56
SMC4-220ENST00000488017 SLC7A14Q8TBB6 771 aa5.32□□□□□ -1.56
SMC4-220ENST00000488017 MAGEB10Q96LZ2 347 aaPredicted RBP5.32□□□□□ -1.56
SMC4-220ENST00000488017 FAM193BQ96PV7 902 aaPredicted RBP5.32□□□□□ -1.56
SMC4-220ENST00000488017 SLC46A2Q9BY10 475 aa5.32□□□□□ -1.56
SMC4-220ENST00000488017 SLC52A2Q9HAB3 445 aa5.32□□□□□ -1.56
SMC4-220ENST00000488017 PFDN2Q9UHV9 154 aa5.32□□□□□ -1.56
SMC4-220ENST00000488017 CENPVL1A0A0U1RR11 272 aa5.31□□□□□ -1.56
SMC4-220ENST00000488017 SCAF4O95104 1147 aaKnown RBP5.31□□□□□ -1.56
SMC4-220ENST00000488017 IQSEC1Q6DN90 963 aa5.31□□□□□ -1.56
SMC4-220ENST00000488017 RD3Q7Z3Z2 195 aa5.31□□□□□ -1.56
SMC4-220ENST00000488017 SUPT20HQ8NEM7 779 aa5.31□□□□□ -1.56
SMC4-220ENST00000488017 PDCD2LQ9BRP1 358 aa5.31□□□□□ -1.56
SMC4-220ENST00000488017 BOCQ9BWV1 1114 aa5.31□□□□□ -1.56
SMC4-220ENST00000488017 CCDC113Q9H0I3 377 aa5.31□□□□□ -1.56
SMC4-220ENST00000488017 NCDNQ9UBB6 729 aa5.31□□□□□ -1.56
SMC4-220ENST00000488017 NDOR1Q9UHB4 597 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms