RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 CYP17A1P05093 508 aa6.41□□□□□ -1.38
SMC4-219ENST00000487747 EPHA7Q15375 998 aa6.41□□□□□ -1.38
SMC4-219ENST00000487747 ELAVL1Q15717 326 aaKnown RBP6.41□□□□□ -1.38
SMC4-219ENST00000487747 CDCA2Q69YH5 1023 aaPredicted RBP6.41□□□□□ -1.38
SMC4-219ENST00000487747 Q6ZPA2 131 aa6.41□□□□□ -1.38
SMC4-219ENST00000487747 ELOA2Q8IYF1 753 aaPredicted RBP6.41□□□□□ -1.38
SMC4-219ENST00000487747 SH3TC2Q8TF17 1288 aa6.41□□□□□ -1.38
SMC4-219ENST00000487747 MIEF2Q96C03 454 aa6.41□□□□□ -1.38
SMC4-219ENST00000487747 REXO2Q9Y3B8 237 aaKnown RBP6.41□□□□□ -1.38
SMC4-219ENST00000487747 WDR33Q9C0J8 1336 aaKnown RBP6.41□□□□□ -1.38
SMC4-219ENST00000487747 A0A0A6YYK5 440 aaPredicted RBP6.4□□□□□ -1.38
SMC4-219ENST00000487747 CYP27B1O15528 508 aa6.4□□□□□ -1.38
SMC4-219ENST00000487747 ADH4P08319 380 aa6.4□□□□□ -1.38
SMC4-219ENST00000487747 KRT4P19013 534 aa6.4□□□□□ -1.38
SMC4-219ENST00000487747 SF3A1Q15459 793 aaKnown RBP6.4□□□□□ -1.38
SMC4-219ENST00000487747 ZNF174Q15697 407 aa6.4□□□□□ -1.38
SMC4-219ENST00000487747 BMP8AQ7Z5Y6 402 aa6.4□□□□□ -1.38
SMC4-219ENST00000487747 ANKRD35Q8N283 1001 aa6.4□□□□□ -1.38
SMC4-219ENST00000487747 RTF1Q92541 710 aaKnown RBP6.4□□□□□ -1.38
SMC4-219ENST00000487747 TCF25Q9BQ70 676 aa6.4□□□□□ -1.38
SMC4-219ENST00000487747 SOX7Q9BT81 388 aa6.4□□□□□ -1.38
SMC4-219ENST00000487747 POFUT1Q9H488 388 aa6.4□□□□□ -1.38
SMC4-219ENST00000487747 POLR3BQ9NW08 1133 aaPredicted RBP6.4□□□□□ -1.38
SMC4-219ENST00000487747 PARPBPQ9NWS1 579 aa6.4□□□□□ -1.38
SMC4-219ENST00000487747 GPRC5BQ9NZH0 403 aa6.4□□□□□ -1.38
SMC4-219ENST00000487747 FAM83GA6ND36 823 aa6.39□□□□□ -1.39
SMC4-219ENST00000487747 RPS6KA4O75676 772 aa6.39□□□□□ -1.39
SMC4-219ENST00000487747 STC2O76061 302 aa6.39□□□□□ -1.39
SMC4-219ENST00000487747 APOL3O95236 402 aa6.39□□□□□ -1.39
SMC4-219ENST00000487747 ASMTLO95671 621 aa6.39□□□□□ -1.39
SMC4-219ENST00000487747 VSIG10L2P0DP72 767 aa6.39□□□□□ -1.39
SMC4-219ENST00000487747 MAKP20794 623 aa6.39□□□□□ -1.39
SMC4-219ENST00000487747 RANGAP1P46060 587 aaPredicted RBP6.39□□□□□ -1.39
SMC4-219ENST00000487747 RABGGTBP53611 331 aa6.39□□□□□ -1.39
SMC4-219ENST00000487747 TOB2Q14106 344 aaPredicted RBP6.39□□□□□ -1.39
SMC4-219ENST00000487747 C21orf62-AS1Q17RA5 79 aa6.39□□□□□ -1.39
SMC4-219ENST00000487747 C1QL3Q5VWW1 255 aa6.39□□□□□ -1.39
SMC4-219ENST00000487747 PCSK4Q6UW60 755 aa6.39□□□□□ -1.39
SMC4-219ENST00000487747 KANSL1Q7Z3B3 1105 aa6.39□□□□□ -1.39
SMC4-219ENST00000487747 PGBD4Q96DM1 585 aa6.39□□□□□ -1.39
SMC4-219ENST00000487747 MYL10Q9BUA6 226 aa6.39□□□□□ -1.39
SMC4-219ENST00000487747 PITHD1Q9GZP4 211 aaPredicted RBP6.39□□□□□ -1.39
SMC4-219ENST00000487747 MTG2Q9H4K7 406 aa6.39□□□□□ -1.39
SMC4-219ENST00000487747 OXSMQ9NWU1 459 aa6.39□□□□□ -1.39
SMC4-219ENST00000487747 XDHP47989 1333 aa6.39□□□□□ -1.39
SMC4-219ENST00000487747 A0A087X1B8 175 aa6.38□□□□□ -1.39
SMC4-219ENST00000487747 KLRG2A4D1S0 409 aaPredicted RBP6.38□□□□□ -1.39
SMC4-219ENST00000487747 FAM20BO75063 409 aa6.38□□□□□ -1.39
SMC4-219ENST00000487747 PRPF6O94906 941 aaKnown RBP6.38□□□□□ -1.39
SMC4-219ENST00000487747 ATP2A2P16615 1042 aaKnown RBP6.38□□□□□ -1.39
SMC4-219ENST00000487747 MAN2A2P49641 1150 aa6.38□□□□□ -1.39
SMC4-219ENST00000487747 INHBCP55103 352 aa6.38□□□□□ -1.39
SMC4-219ENST00000487747 ADCY2Q08462 1091 aa6.38□□□□□ -1.39
SMC4-219ENST00000487747 PABPC4Q13310 644 aaKnown RBP eCLIP6.38□□□□□ -1.398e-9■■■■■ 603.5
SMC4-219ENST00000487747 CNGB1Q14028 1251 aaPredicted RBP6.38□□□□□ -1.39
SMC4-219ENST00000487747 CFAP100Q494V2 611 aa6.38□□□□□ -1.39
SMC4-219ENST00000487747 GAGE13Q4V321 117 aa6.38□□□□□ -1.39
SMC4-219ENST00000487747 FKBP15Q5T1M5 1219 aa6.38□□□□□ -1.39
SMC4-219ENST00000487747 GPR87Q9BY21 358 aa6.38□□□□□ -1.39
SMC4-219ENST00000487747 ZMAT4Q9H898 229 aa6.38□□□□□ -1.39
SMC4-219ENST00000487747 NCDNQ9UBB6 729 aa6.38□□□□□ -1.39
SMC4-219ENST00000487747 A0A0A6YYJ9 748 aa6.37□□□□□ -1.39
SMC4-219ENST00000487747 KIR2DL3P43628 341 aa6.37□□□□□ -1.39
SMC4-219ENST00000487747 PTTG1IPP53801 180 aa6.37□□□□□ -1.39
SMC4-219ENST00000487747 BCAR1P56945 870 aa6.37□□□□□ -1.39
SMC4-219ENST00000487747 NFE2L2Q16236 605 aa6.37□□□□□ -1.39
SMC4-219ENST00000487747 SMN1Q16637 294 aaKnown RBP6.37□□□□□ -1.39
SMC4-219ENST00000487747 KRT40Q6A162 431 aa6.37□□□□□ -1.39
SMC4-219ENST00000487747 GSPT2Q8IYD1 628 aaKnown RBP6.37□□□□□ -1.39
SMC4-219ENST00000487747 NXPE1Q8N323 547 aa6.37□□□□□ -1.39
SMC4-219ENST00000487747 ZNF512Q96ME7 567 aaPredicted RBP6.37□□□□□ -1.39
SMC4-219ENST00000487747 AGAP2Q99490 1192 aa6.37□□□□□ -1.39
SMC4-219ENST00000487747 ZSWIM4Q9H7M6 989 aa6.37□□□□□ -1.39
SMC4-219ENST00000487747 TOMM22Q9NS69 142 aa6.37□□□□□ -1.39
SMC4-219ENST00000487747 RCAN3Q9UKA8 241 aa6.37□□□□□ -1.39
SMC4-219ENST00000487747 SPO11Q9Y5K1 396 aa6.37□□□□□ -1.39
SMC4-219ENST00000487747 OPHN1O60890 802 aa6.36□□□□□ -1.39
SMC4-219ENST00000487747 CFBP00751 764 aa6.36□□□□□ -1.39
SMC4-219ENST00000487747 KRTAP15-1Q3LI76 137 aa6.36□□□□□ -1.39
SMC4-219ENST00000487747 UBE2R2Q712K3 238 aaPredicted RBP6.36□□□□□ -1.39
SMC4-219ENST00000487747 NME9Q86XW9 330 aa6.36□□□□□ -1.39
SMC4-219ENST00000487747 C7orf31Q8N865 590 aa6.36□□□□□ -1.39
SMC4-219ENST00000487747 MB21D1Q8N884 522 aa6.36□□□□□ -1.39
SMC4-219ENST00000487747 ATXN2LQ8WWM7 1075 aaKnown RBP6.36□□□□□ -1.39
SMC4-219ENST00000487747 RPGRQ92834 1020 aaKnown RBP6.36□□□□□ -1.39
SMC4-219ENST00000487747 TMEM260Q9NX78 707 aa6.36□□□□□ -1.39
SMC4-219ENST00000487747 ZNF891A8MT65 544 aaPredicted RBP6.35□□□□□ -1.39
SMC4-219ENST00000487747 ELL2O00472 640 aaPredicted RBP6.35□□□□□ -1.39
SMC4-219ENST00000487747 DAPK3O43293 454 aa6.35□□□□□ -1.39
SMC4-219ENST00000487747 JUNP05412 331 aaKnown RBP6.35□□□□□ -1.39
SMC4-219ENST00000487747 INHBEP58166 350 aa6.35□□□□□ -1.39
SMC4-219ENST00000487747 FAM214AQ32MH5 1076 aa6.35□□□□□ -1.39
SMC4-219ENST00000487747 KIAA1841Q6NSI8 718 aa6.35□□□□□ -1.39
SMC4-219ENST00000487747 PHYKPLQ8IUZ5 450 aa6.35□□□□□ -1.39
SMC4-219ENST00000487747 RPUSD2Q8IZ73 545 aaKnown RBP6.35□□□□□ -1.39
SMC4-219ENST00000487747 CMTM4Q8IZR5 234 aa6.35□□□□□ -1.39
SMC4-219ENST00000487747 SREK1Q8WXA9 508 aaKnown RBP6.35□□□□□ -1.39
SMC4-219ENST00000487747 MRFAP1L1Q96HT8 127 aa6.35□□□□□ -1.39
SMC4-219ENST00000487747 MNTQ99583 582 aa6.35□□□□□ -1.39
SMC4-219ENST00000487747 MTFR1LQ9H019 292 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms