RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 CXXC5Q7LFL8 322 aaKnown RBP6.45□□□□□ -1.38
PRPF38A-203ENST00000487160 BMP8AQ7Z5Y6 402 aa6.45□□□□□ -1.38
PRPF38A-203ENST00000487160 LINC00482Q8N8I6 264 aa6.45□□□□□ -1.38
PRPF38A-203ENST00000487160 OR5AN1Q8NGI8 311 aa6.45□□□□□ -1.38
PRPF38A-203ENST00000487160 ZBTB8AQ96BR9 441 aa6.45□□□□□ -1.38
PRPF38A-203ENST00000487160 AIFM3Q96NN9 605 aa6.45□□□□□ -1.38
PRPF38A-203ENST00000487160 SERPINB13Q9UIV8 391 aa6.45□□□□□ -1.38
PRPF38A-203ENST00000487160 AP1G1O43747 822 aa6.44□□□□□ -1.38
PRPF38A-203ENST00000487160 CUTAO60888 179 aa6.44□□□□□ -1.38
PRPF38A-203ENST00000487160 CAND2O75155 1236 aa6.44□□□□□ -1.38
PRPF38A-203ENST00000487160 GPR15P49685 360 aa6.44□□□□□ -1.38
PRPF38A-203ENST00000487160 DLG4P78352 724 aa6.44□□□□□ -1.38
PRPF38A-203ENST00000487160 DGKDQ16760 1214 aa6.44□□□□□ -1.38
PRPF38A-203ENST00000487160 IFIT1BQ5T764 474 aaKnown RBP6.44□□□□□ -1.38
PRPF38A-203ENST00000487160 GRAMD4Q6IC98 578 aa6.44□□□□□ -1.38
PRPF38A-203ENST00000487160 THEMISQ8N1K5 641 aaPredicted RBP6.44□□□□□ -1.38
PRPF38A-203ENST00000487160 TTLL6Q8N841 843 aa6.44□□□□□ -1.38
PRPF38A-203ENST00000487160 FBXO15Q8NCQ5 510 aaPredicted RBP6.44□□□□□ -1.38
PRPF38A-203ENST00000487160 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.44□□□□□ -1.38
PRPF38A-203ENST00000487160 KCNN1Q92952 543 aa6.44□□□□□ -1.38
PRPF38A-203ENST00000487160 HIST1H2AHQ96KK5 128 aa6.44□□□□□ -1.38
PRPF38A-203ENST00000487160 HIST1H2AJQ99878 128 aa6.44□□□□□ -1.38
PRPF38A-203ENST00000487160 OBP2AQ9NY56 170 aa6.44□□□□□ -1.38
PRPF38A-203ENST00000487160 A0A0A6YYK5 440 aaPredicted RBP6.43□□□□□ -1.38
PRPF38A-203ENST00000487160 MAFO75444 373 aaPredicted RBP6.43□□□□□ -1.38
PRPF38A-203ENST00000487160 POU2F2P09086 479 aa6.43□□□□□ -1.38
PRPF38A-203ENST00000487160 HSPA6P17066 643 aa6.43□□□□□ -1.38
PRPF38A-203ENST00000487160 TAL1P17542 331 aaPredicted RBP6.43□□□□□ -1.38
PRPF38A-203ENST00000487160 XPAP23025 273 aaPredicted RBP6.43□□□□□ -1.38
PRPF38A-203ENST00000487160 MLLT6P55198 1093 aaPredicted RBP6.43□□□□□ -1.38
PRPF38A-203ENST00000487160 MAP3K12Q12852 859 aa6.43□□□□□ -1.38
PRPF38A-203ENST00000487160 ADRM1Q16186 407 aa6.43□□□□□ -1.38
PRPF38A-203ENST00000487160 ANO4Q32M45 955 aa6.43□□□□□ -1.38
PRPF38A-203ENST00000487160 CATIPQ7Z7H3 387 aa6.43□□□□□ -1.38
PRPF38A-203ENST00000487160 Q8N3U1 123 aa6.43□□□□□ -1.38
PRPF38A-203ENST00000487160 SLC35G2Q8TBE7 412 aa6.43□□□□□ -1.38
PRPF38A-203ENST00000487160 FATE1Q969F0 183 aa6.43□□□□□ -1.38
PRPF38A-203ENST00000487160 COA7Q96BR5 231 aa6.43□□□□□ -1.38
PRPF38A-203ENST00000487160 DYDC2Q96IM9 177 aa6.43□□□□□ -1.38
PRPF38A-203ENST00000487160 WRNIP1Q96S55 665 aa6.43□□□□□ -1.38
PRPF38A-203ENST00000487160 FDXACB1Q9BRP7 624 aaPredicted RBP6.43□□□□□ -1.38
PRPF38A-203ENST00000487160 SOX7Q9BT81 388 aa6.43□□□□□ -1.38
PRPF38A-203ENST00000487160 SLC12A5Q9H2X9 1139 aa6.43□□□□□ -1.38
PRPF38A-203ENST00000487160 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.43□□□□□ -1.38
PRPF38A-203ENST00000487160 CDC42EP3Q9UKI2 254 aa6.43□□□□□ -1.38
PRPF38A-203ENST00000487160 SYNPO2Q9UMS6 1093 aa6.43□□□□□ -1.38
PRPF38A-203ENST00000487160 OFD1O75665 1012 aa6.42□□□□□ -1.38
PRPF38A-203ENST00000487160 KNG1P01042 644 aa6.42□□□□□ -1.38
PRPF38A-203ENST00000487160 PLA2G1BP04054 148 aaKnown RBP6.42□□□□□ -1.38
PRPF38A-203ENST00000487160 KRT18P05783 430 aaKnown RBP6.42□□□□□ -1.38
PRPF38A-203ENST00000487160 COL6A1P12109 1028 aa6.42□□□□□ -1.38
PRPF38A-203ENST00000487160 PDCP20941 246 aa6.42□□□□□ -1.38
PRPF38A-203ENST00000487160 MALLQ13021 153 aa6.42□□□□□ -1.38
PRPF38A-203ENST00000487160 ZNF267Q14586 743 aaPredicted RBP6.42□□□□□ -1.38
PRPF38A-203ENST00000487160 UAP1L1Q3KQV9 507 aa6.42□□□□□ -1.38
PRPF38A-203ENST00000487160 MAP9Q49MG5 647 aa6.42□□□□□ -1.38
PRPF38A-203ENST00000487160 ARHGAP29Q52LW3 1261 aa6.42□□□□□ -1.38
PRPF38A-203ENST00000487160 TRMT10BQ6PF06 316 aaKnown RBP6.42□□□□□ -1.38
PRPF38A-203ENST00000487160 SLC4A10Q6U841 1118 aa6.42□□□□□ -1.38
PRPF38A-203ENST00000487160 B3GNT9Q6UX72 402 aa6.42□□□□□ -1.38
PRPF38A-203ENST00000487160 OTOP2Q7RTS6 562 aa6.42□□□□□ -1.38
PRPF38A-203ENST00000487160 DGKHQ86XP1 1220 aa6.42□□□□□ -1.38
PRPF38A-203ENST00000487160 TMEFF1Q8IYR6 380 aa6.42□□□□□ -1.38
PRPF38A-203ENST00000487160 BCL6BQ8N143 479 aaPredicted RBP6.42□□□□□ -1.38
PRPF38A-203ENST00000487160 NRG4Q8WWG1 115 aa6.42□□□□□ -1.38
PRPF38A-203ENST00000487160 GTPBP4Q9BZE4 634 aaKnown RBP6.42□□□□□ -1.38
PRPF38A-203ENST00000487160 HAPLN2Q9GZV7 340 aa6.42□□□□□ -1.38
PRPF38A-203ENST00000487160 NMRK2Q9NPI5 230 aa6.42□□□□□ -1.38
PRPF38A-203ENST00000487160 DNAI1Q9UI46 699 aa6.42□□□□□ -1.38
PRPF38A-203ENST00000487160 RCAN3Q9UKA8 241 aa6.42□□□□□ -1.38
PRPF38A-203ENST00000487160 PMF1-BGLAPU3KQ54 211 aa6.42□□□□□ -1.38
PRPF38A-203ENST00000487160 A0A0G2JNJ9 132 aa6.41□□□□□ -1.38
PRPF38A-203ENST00000487160 H0Y858 1186 aa6.41□□□□□ -1.38
PRPF38A-203ENST00000487160 NRP2O60462 931 aa6.41□□□□□ -1.38
PRPF38A-203ENST00000487160 CYP7B1O75881 506 aa6.41□□□□□ -1.38
PRPF38A-203ENST00000487160 GSPT1P15170 499 aaKnown RBP6.41□□□□□ -1.38
PRPF38A-203ENST00000487160 IL13P35225 146 aa6.41□□□□□ -1.38
PRPF38A-203ENST00000487160 FXR1P51114 621 aaKnown RBP eCLIP6.41□□□□□ -1.38
PRPF38A-203ENST00000487160 SLC16A1P53985 500 aa6.41□□□□□ -1.38
PRPF38A-203ENST00000487160 HLTFQ14527 1009 aaKnown RBP eCLIP6.41□□□□□ -1.38
PRPF38A-203ENST00000487160 CCDC178Q5BJE1 867 aa6.41□□□□□ -1.38
PRPF38A-203ENST00000487160 MUM1L1Q5H9M0 696 aa6.41□□□□□ -1.38
PRPF38A-203ENST00000487160 ATAT1Q5SQI0 421 aa6.41□□□□□ -1.38
PRPF38A-203ENST00000487160 TMEM200BQ69YZ2 307 aa6.41□□□□□ -1.38
PRPF38A-203ENST00000487160 CCSAPQ6IQ19 270 aaPredicted RBP6.41□□□□□ -1.38
PRPF38A-203ENST00000487160 LILRA6Q6PI73 481 aa6.41□□□□□ -1.38
PRPF38A-203ENST00000487160 BTNL9Q6UXG8 535 aa6.41□□□□□ -1.38
PRPF38A-203ENST00000487160 HPS3Q969F9 1004 aa6.41□□□□□ -1.38
PRPF38A-203ENST00000487160 DMRT3Q9NQL9 472 aa6.41□□□□□ -1.38
PRPF38A-203ENST00000487160 SPATA6Q9NWH7 488 aaPredicted RBP6.41□□□□□ -1.38
PRPF38A-203ENST00000487160 SAE1Q9UBE0 346 aaPredicted RBP6.41□□□□□ -1.38
PRPF38A-203ENST00000487160 Q9UFV3 132 aa6.41□□□□□ -1.38
PRPF38A-203ENST00000487160 DDX20Q9UHI6 824 aaKnown RBP6.41□□□□□ -1.38
PRPF38A-203ENST00000487160 LIMCH1Q9UPQ0 1083 aa6.41□□□□□ -1.38
PRPF38A-203ENST00000487160 DNM3Q9UQ16 869 aa6.41□□□□□ -1.38
PRPF38A-203ENST00000487160 CCDC154A6NI56 674 aa6.4□□□□□ -1.38
PRPF38A-203ENST00000487160 ETV2O00321 342 aaPredicted RBP6.4□□□□□ -1.38
PRPF38A-203ENST00000487160 ERC2O15083 957 aa6.4□□□□□ -1.38
PRPF38A-203ENST00000487160 CTNND1O60716 968 aaKnown RBP6.4□□□□□ -1.38
PRPF38A-203ENST00000487160 SEC24DO94855 1032 aaPredicted RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms