RNA–Protein interactions for RNA: ENST00000487109.5

ABCA2-218, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 8,031 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-218ENST00000487109 FBXO40Q9UH90 709 aa13.16□□□□□ -0.3
ABCA2-218ENST00000487109 PTCH1Q13635 1447 aa13.16□□□□□ -0.3
ABCA2-218ENST00000487109 CAPZA2P47755 286 aa13.16□□□□□ -0.3
ABCA2-218ENST00000487109 MAN2A1Q16706 1144 aa13.16□□□□□ -0.3
ABCA2-218ENST00000487109 SLFN12LQ6IEE8 588 aa13.16□□□□□ -0.3
ABCA2-218ENST00000487109 OSBPL3Q9H4L5 887 aa13.16□□□□□ -0.3
ABCA2-218ENST00000487109 CCDC78A2IDD5 438 aa13.16□□□□□ -0.3
ABCA2-218ENST00000487109 ATP5HO75947 161 aa13.16□□□□□ -0.3
ABCA2-218ENST00000487109 COPB2P35606 906 aa13.16□□□□□ -0.3
ABCA2-218ENST00000487109 POU5F1BQ06416 359 aa13.16□□□□□ -0.3
ABCA2-218ENST00000487109 NEK9Q8TD19 979 aa13.16□□□□□ -0.3
ABCA2-218ENST00000487109 ASIC4Q96FT7 647 aa13.16□□□□□ -0.3
ABCA2-218ENST00000487109 OSBPL10Q9BXB5 764 aa13.16□□□□□ -0.3
ABCA2-218ENST00000487109 DNAJC17Q9NVM6 304 aaKnown RBP13.16□□□□□ -0.3
ABCA2-218ENST00000487109 SATB2Q9UPW6 733 aa13.16□□□□□ -0.3
ABCA2-218ENST00000487109 ETF1P62495 437 aaKnown RBP13.16□□□□□ -0.3
ABCA2-218ENST00000487109 C16orf72Q14CZ0 275 aa13.16□□□□□ -0.3
ABCA2-218ENST00000487109 SLC10A5Q5PT55 438 aa13.16□□□□□ -0.3
ABCA2-218ENST00000487109 EPM2AIP1Q7L775 607 aaPredicted RBP13.16□□□□□ -0.3
ABCA2-218ENST00000487109 POLR3EQ9NVU0 708 aa13.16□□□□□ -0.3
ABCA2-218ENST00000487109 MYL3P08590 195 aa13.16□□□□□ -0.3
ABCA2-218ENST00000487109 RBL2Q08999 1139 aa13.16□□□□□ -0.3
ABCA2-218ENST00000487109 NNTQ13423 1086 aa13.16□□□□□ -0.3
ABCA2-218ENST00000487109 FAM96AQ9H5X1 160 aa13.16□□□□□ -0.3
ABCA2-218ENST00000487109 PCDHA5Q9Y5H7 936 aa13.16□□□□□ -0.3
ABCA2-218ENST00000487109 MAP3K4Q9Y6R4 1608 aa13.16□□□□□ -0.3
ABCA2-218ENST00000487109 TRPC1P48995 793 aa13.16□□□□□ -0.3
ABCA2-218ENST00000487109 ANGPT1Q15389 498 aa13.16□□□□□ -0.3
ABCA2-218ENST00000487109 PDXDC2PQ6P474 469 aa13.16□□□□□ -0.3
ABCA2-218ENST00000487109 RASSF3Q86WH2 238 aa13.16□□□□□ -0.3
ABCA2-218ENST00000487109 MAP4K1Q92918 833 aa13.16□□□□□ -0.3
ABCA2-218ENST00000487109 EML4Q9HC35 981 aaKnown RBP13.16□□□□□ -0.3
ABCA2-218ENST00000487109 DIAPH2O60879 1101 aa13.15□□□□□ -0.3
ABCA2-218ENST00000487109 TDRD7Q8NHU6 1098 aaKnown RBP13.15□□□□□ -0.3
ABCA2-218ENST00000487109 DCAF4Q8WV16 495 aa13.15□□□□□ -0.3
ABCA2-218ENST00000487109 GCOM2Q9BZD3 368 aaPredicted RBP13.15□□□□□ -0.3
ABCA2-218ENST00000487109 ASNSP08243 561 aa13.15□□□□□ -0.3
ABCA2-218ENST00000487109 NR1D1P20393 614 aa13.15□□□□□ -0.3
ABCA2-218ENST00000487109 TSPY1Q01534 308 aa13.15□□□□□ -0.3
ABCA2-218ENST00000487109 NLRP10Q86W26 655 aa13.15□□□□□ -0.3
ABCA2-218ENST00000487109 FAM167AQ96KS9 214 aa13.15□□□□□ -0.3
ABCA2-218ENST00000487109 GEMIN8Q9NWZ8 242 aaKnown RBP13.15□□□□□ -0.3
ABCA2-218ENST00000487109 TMEM161AQ9NX61 479 aa13.15□□□□□ -0.3
ABCA2-218ENST00000487109 NOVA2Q9UNW9 492 aaKnown RBP13.15□□□□□ -0.3
ABCA2-218ENST00000487109 GSPT1P15170 499 aaKnown RBP13.15□□□□□ -0.3
ABCA2-218ENST00000487109 SLC7A5Q01650 507 aa13.15□□□□□ -0.3
ABCA2-218ENST00000487109 RNF14Q9UBS8 474 aa13.15□□□□□ -0.3
ABCA2-218ENST00000487109 PPP6R3Q5H9R7 873 aaPredicted RBP13.15□□□□□ -0.3
ABCA2-218ENST00000487109 NUDT18Q6ZVK8 323 aa13.15□□□□□ -0.3
ABCA2-218ENST00000487109 SCN4BQ8IWT1 228 aa13.15□□□□□ -0.3
ABCA2-218ENST00000487109 TBC1D19Q8N5T2 526 aa13.15□□□□□ -0.3
ABCA2-218ENST00000487109 P2RX5Q93086 422 aa13.15□□□□□ -0.3
ABCA2-218ENST00000487109 PRDM5Q9NQX1 630 aaPredicted RBP13.15□□□□□ -0.3
ABCA2-218ENST00000487109 FBXL5Q9UKA1 691 aa13.15□□□□□ -0.3
ABCA2-218ENST00000487109 CLIC4Q9Y696 253 aa13.15□□□□□ -0.3
ABCA2-218ENST00000487109 NUGGCQ68CJ6 796 aa13.15□□□□□ -0.3
ABCA2-218ENST00000487109 RINLQ6ZS11 566 aa13.15□□□□□ -0.3
ABCA2-218ENST00000487109 DNAJC7Q99615 494 aa13.15□□□□□ -0.3
ABCA2-218ENST00000487109 NGRNQ9NPE2 291 aaKnown RBP13.15□□□□□ -0.3
ABCA2-218ENST00000487109 TRAF3IP3Q9Y228 551 aa13.15□□□□□ -0.3
ABCA2-218ENST00000487109 CARMIL3Q8ND23 1372 aa13.15□□□□□ -0.31
ABCA2-218ENST00000487109 SEC24BO95487 1268 aa13.15□□□□□ -0.31
ABCA2-218ENST00000487109 FTCDO95954 541 aa13.15□□□□□ -0.31
ABCA2-218ENST00000487109 CDC25BP30305 580 aa13.15□□□□□ -0.31
ABCA2-218ENST00000487109 JAK3P52333 1124 aa13.15□□□□□ -0.31
ABCA2-218ENST00000487109 CYP26B1Q9NR63 512 aa13.15□□□□□ -0.31
ABCA2-218ENST00000487109 LMBRD1Q9NUN5 540 aa13.15□□□□□ -0.31
ABCA2-218ENST00000487109 PDHA1P08559 390 aa13.14□□□□□ -0.31
ABCA2-218ENST00000487109 FKBP3Q00688 224 aaKnown RBP13.14□□□□□ -0.31
ABCA2-218ENST00000487109 CUL1Q13616 776 aa13.14□□□□□ -0.31
ABCA2-218ENST00000487109 RNF135Q8IUD6 432 aa13.14□□□□□ -0.31
ABCA2-218ENST00000487109 BTBD6Q96KE9 485 aa13.14□□□□□ -0.31
ABCA2-218ENST00000487109 TSSK1BQ9BXA7 367 aa13.14□□□□□ -0.31
ABCA2-218ENST00000487109 SP110Q9HB58 689 aa13.14□□□□□ -0.31
ABCA2-218ENST00000487109 CAB39Q9Y376 341 aaPredicted RBP13.14□□□□□ -0.31
ABCA2-218ENST00000487109 GOLGA8RI6L899 631 aa13.14□□□□□ -0.31
ABCA2-218ENST00000487109 DAB1O75553 588 aa13.14□□□□□ -0.31
ABCA2-218ENST00000487109 PKN3Q6P5Z2 889 aa13.14□□□□□ -0.31
ABCA2-218ENST00000487109 TMEM179Q6ZVK1 233 aa13.14□□□□□ -0.31
ABCA2-218ENST00000487109 EEPD1Q7L9B9 569 aa13.14□□□□□ -0.31
ABCA2-218ENST00000487109 MSTO1Q9BUK6 570 aa13.14□□□□□ -0.31
ABCA2-218ENST00000487109 ZFP69BQ9UJL9 534 aa13.14□□□□□ -0.31
ABCA2-218ENST00000487109 ASAP1Q9ULH1 1129 aa13.14□□□□□ -0.31
ABCA2-218ENST00000487109 K7ERI5 159 aa13.14□□□□□ -0.31
ABCA2-218ENST00000487109 SKIV2LQ15477 1246 aaKnown RBP13.14□□□□□ -0.31
ABCA2-218ENST00000487109 ZNF658Q5TYW1 1059 aaPredicted RBP13.14□□□□□ -0.31
ABCA2-218ENST00000487109 AP1M1Q9BXS5 423 aa13.14□□□□□ -0.31
ABCA2-218ENST00000487109 NHEJ1Q9H9Q4 299 aaPredicted RBP13.14□□□□□ -0.31
ABCA2-218ENST00000487109 SAYSD1Q9NPB0 183 aa13.14□□□□□ -0.31
ABCA2-218ENST00000487109 DENND3A2RUS2 1198 aa13.14□□□□□ -0.31
ABCA2-218ENST00000487109 SPDYE5A6NIY4 337 aa13.14□□□□□ -0.31
ABCA2-218ENST00000487109 PODXLO00592 558 aa13.14□□□□□ -0.31
ABCA2-218ENST00000487109 ADD1P35611 737 aaKnown RBP13.14□□□□□ -0.31
ABCA2-218ENST00000487109 SLC39A14Q15043 492 aa13.14□□□□□ -0.31
ABCA2-218ENST00000487109 SPDYE7PQ495Y7 208 aa13.14□□□□□ -0.31
ABCA2-218ENST00000487109 ERFEQ4G0M1 354 aa13.14□□□□□ -0.31
ABCA2-218ENST00000487109 MFN1Q8IWA4 741 aa13.14□□□□□ -0.31
ABCA2-218ENST00000487109 NOP53Q9NZM5 478 aaKnown RBP13.14□□□□□ -0.31
ABCA2-218ENST00000487109 HEY1Q9Y5J3 304 aa13.14□□□□□ -0.31
ABCA2-218ENST00000487109 ERBB3P21860 1342 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms