RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 PRPF6O94906 941 aaKnown RBP5.1□□□□□ -1.59
PTCD3-216ENST00000487043 LDHAP00338 332 aaKnown RBP5.1□□□□□ -1.59
PTCD3-216ENST00000487043 DBHP09172 617 aa5.1□□□□□ -1.59
PTCD3-216ENST00000487043 MED14OSP0DP75 135 aa5.1□□□□□ -1.59
PTCD3-216ENST00000487043 MYBP10242 640 aa5.1□□□□□ -1.59
PTCD3-216ENST00000487043 TRIM27P14373 513 aa5.1□□□□□ -1.59
PTCD3-216ENST00000487043 GLDCP23378 1020 aa5.1□□□□□ -1.59
PTCD3-216ENST00000487043 AKAP5P24588 427 aa5.1□□□□□ -1.59
PTCD3-216ENST00000487043 MTNR1BP49286 362 aa5.1□□□□□ -1.59
PTCD3-216ENST00000487043 NUP153P49790 1475 aaKnown RBP5.1□□□□□ -1.59
PTCD3-216ENST00000487043 NEK3P51956 506 aa5.1□□□□□ -1.59
PTCD3-216ENST00000487043 PURAQ00577 322 aaKnown RBP5.1□□□□□ -1.59
PTCD3-216ENST00000487043 KIF23Q02241 960 aaPredicted RBP5.1□□□□□ -1.59
PTCD3-216ENST00000487043 GBX1Q14549 363 aa5.1□□□□□ -1.59
PTCD3-216ENST00000487043 NR0B2Q15466 257 aa5.1□□□□□ -1.59
PTCD3-216ENST00000487043 COBLL1Q53SF7 1204 aa5.1□□□□□ -1.59
PTCD3-216ENST00000487043 PITRM1Q5JRX3 1037 aa5.1□□□□□ -1.59
PTCD3-216ENST00000487043 TTC38Q5R3I4 469 aa5.1□□□□□ -1.59
PTCD3-216ENST00000487043 ZBTB41Q5SVQ8 909 aa5.1□□□□□ -1.59
PTCD3-216ENST00000487043 PRAMEF9Q5VWM5 478 aa5.1□□□□□ -1.59
PTCD3-216ENST00000487043 KCNK18Q7Z418 384 aa5.1□□□□□ -1.59
PTCD3-216ENST00000487043 CATIPQ7Z7H3 387 aa5.1□□□□□ -1.59
PTCD3-216ENST00000487043 RTN4RL1Q86UN2 441 aaPredicted RBP5.1□□□□□ -1.59
PTCD3-216ENST00000487043 NLRX1Q86UT6 975 aa5.1□□□□□ -1.59
PTCD3-216ENST00000487043 SAMD3Q8N6K7 520 aa5.1□□□□□ -1.59
PTCD3-216ENST00000487043 SVIPQ8NHG7 77 aa5.1□□□□□ -1.59
PTCD3-216ENST00000487043 SLC35G2Q8TBE7 412 aa5.1□□□□□ -1.59
PTCD3-216ENST00000487043 RUNDC1Q96C34 613 aa5.1□□□□□ -1.59
PTCD3-216ENST00000487043 FOXRED1Q96CU9 486 aaPredicted RBP5.1□□□□□ -1.59
PTCD3-216ENST00000487043 SLC39A13Q96H72 371 aa5.1□□□□□ -1.59
PTCD3-216ENST00000487043 PEX11GQ96HA9 241 aa5.1□□□□□ -1.59
PTCD3-216ENST00000487043 LRRIQ1Q96JM4 1722 aa5.1□□□□□ -1.59
PTCD3-216ENST00000487043 KRTAP4-5Q9BYR2 181 aa5.1□□□□□ -1.59
PTCD3-216ENST00000487043 UACAQ9BZF9 1416 aa5.1□□□□□ -1.59
PTCD3-216ENST00000487043 ZNF277Q9NRM2 450 aaPredicted RBP5.1□□□□□ -1.59
PTCD3-216ENST00000487043 UCKL1Q9NWZ5 548 aa5.1□□□□□ -1.59
PTCD3-216ENST00000487043 USP25Q9UHP3 1055 aa5.1□□□□□ -1.59
PTCD3-216ENST00000487043 CFAP43Q8NDM7 1665 aa5.09□□□□□ -1.59
PTCD3-216ENST00000487043 ST20-MTHFSA0A0A6YYL1 179 aa5.09□□□□□ -1.59
PTCD3-216ENST00000487043 HPXP02790 462 aa5.09□□□□□ -1.59
PTCD3-216ENST00000487043 PNLIPP16233 465 aa5.09□□□□□ -1.59
PTCD3-216ENST00000487043 FAHP16930 419 aa5.09□□□□□ -1.59
PTCD3-216ENST00000487043 SDHBP21912 280 aa5.09□□□□□ -1.59
PTCD3-216ENST00000487043 MC4RP32245 332 aa5.09□□□□□ -1.59
PTCD3-216ENST00000487043 ADKP55263 362 aaKnown RBP5.09□□□□□ -1.59
PTCD3-216ENST00000487043 LGALS4P56470 323 aa5.09□□□□□ -1.59
PTCD3-216ENST00000487043 LINC00310P59036 64 aa5.09□□□□□ -1.59
PTCD3-216ENST00000487043 HERVK_113P62684 666 aa5.09□□□□□ -1.59
PTCD3-216ENST00000487043 MRPS9P82933 396 aaKnown RBP5.09□□□□□ -1.59
PTCD3-216ENST00000487043 SLC6A3Q01959 620 aa5.09□□□□□ -1.59
PTCD3-216ENST00000487043 UAP1L1Q3KQV9 507 aa5.09□□□□□ -1.59
PTCD3-216ENST00000487043 LCE5AQ5TCM9 118 aa5.09□□□□□ -1.59
PTCD3-216ENST00000487043 PAQR3Q6TCH7 311 aa5.09□□□□□ -1.59
PTCD3-216ENST00000487043 B3GNT9Q6UX72 402 aa5.09□□□□□ -1.59
PTCD3-216ENST00000487043 GRAMD1CQ8IYS0 662 aa5.09□□□□□ -1.59
PTCD3-216ENST00000487043 PJA1Q8NG27 643 aa5.09□□□□□ -1.59
PTCD3-216ENST00000487043 AUTS2Q8WXX7 1259 aa5.09□□□□□ -1.59
PTCD3-216ENST00000487043 SSH1Q8WYL5 1049 aa5.09□□□□□ -1.59
PTCD3-216ENST00000487043 E2F7Q96AV8 911 aa5.09□□□□□ -1.59
PTCD3-216ENST00000487043 RAX2Q96IS3 184 aa5.09□□□□□ -1.59
PTCD3-216ENST00000487043 TAAR9Q96RI9 348 aa5.09□□□□□ -1.59
PTCD3-216ENST00000487043 GTPBP4Q9BZE4 634 aaKnown RBP5.09□□□□□ -1.59
PTCD3-216ENST00000487043 RNF38Q9H0F5 515 aa5.09□□□□□ -1.59
PTCD3-216ENST00000487043 ZNF700Q9H0M5 742 aa5.09□□□□□ -1.59
PTCD3-216ENST00000487043 KCTD10Q9H3F6 313 aa5.09□□□□□ -1.59
PTCD3-216ENST00000487043 PRDM12Q9H4Q4 367 aa5.09□□□□□ -1.59
PTCD3-216ENST00000487043 MAN1C1Q9NR34 630 aa5.09□□□□□ -1.59
PTCD3-216ENST00000487043 C1orf112Q9NSG2 853 aa5.09□□□□□ -1.59
PTCD3-216ENST00000487043 DPP7Q9UHL4 492 aa5.09□□□□□ -1.59
PTCD3-216ENST00000487043 TUBD1Q9UJT1 453 aa5.09□□□□□ -1.59
PTCD3-216ENST00000487043 ASB1Q9Y576 335 aa5.09□□□□□ -1.59
PTCD3-216ENST00000487043 UHRF1BP1LA0JNW5 1464 aa5.08□□□□□ -1.6
PTCD3-216ENST00000487043 ATP10BO94823 1461 aa5.08□□□□□ -1.6
PTCD3-216ENST00000487043 MTUS2Q5JR59 1369 aa5.08□□□□□ -1.6
PTCD3-216ENST00000487043 NUDT19A8MXV4 375 aa5.08□□□□□ -1.6
PTCD3-216ENST00000487043 APAF1O14727 1248 aa5.08□□□□□ -1.6
PTCD3-216ENST00000487043 SRGAP3O43295 1099 aa5.08□□□□□ -1.6
PTCD3-216ENST00000487043 PRLP01236 227 aa5.08□□□□□ -1.6
PTCD3-216ENST00000487043 CYBBP04839 570 aa5.08□□□□□ -1.6
PTCD3-216ENST00000487043 IFIT2P09913 472 aaKnown RBP5.08□□□□□ -1.6
PTCD3-216ENST00000487043 MTHFD2P13995 350 aa5.08□□□□□ -1.6
PTCD3-216ENST00000487043 AOAHP28039 575 aa5.08□□□□□ -1.6
PTCD3-216ENST00000487043 PDE6BP35913 854 aa5.08□□□□□ -1.6
PTCD3-216ENST00000487043 SLC5A3P53794 718 aa5.08□□□□□ -1.6
PTCD3-216ENST00000487043 CCT2P78371 535 aaKnown RBP5.08□□□□□ -1.6
PTCD3-216ENST00000487043 CDK17Q00537 523 aa5.08□□□□□ -1.6
PTCD3-216ENST00000487043 ADCY2Q08462 1091 aa5.08□□□□□ -1.6
PTCD3-216ENST00000487043 DBPQ10586 325 aaPredicted RBP5.08□□□□□ -1.6
PTCD3-216ENST00000487043 PICALMQ13492 652 aa5.08□□□□□ -1.6
PTCD3-216ENST00000487043 GALEQ14376 348 aa5.08□□□□□ -1.6
PTCD3-216ENST00000487043 MYBPC3Q14896 1274 aa5.08□□□□□ -1.6
PTCD3-216ENST00000487043 SAFBQ15424 915 aaKnown RBP eCLIP5.08□□□□□ -1.6
PTCD3-216ENST00000487043 SLFN12LQ6IEE8 588 aa5.08□□□□□ -1.6
PTCD3-216ENST00000487043 UNQ6494/PRO21346Q6UXR6 183 aa5.08□□□□□ -1.6
PTCD3-216ENST00000487043 LILRA2Q8N149 483 aa5.08□□□□□ -1.6
PTCD3-216ENST00000487043 TTLL11Q8NHH1 800 aa5.08□□□□□ -1.6
PTCD3-216ENST00000487043 TTC17Q96AE7 1141 aa5.08□□□□□ -1.6
PTCD3-216ENST00000487043 MAML3Q96JK9 1138 aa5.08□□□□□ -1.6
PTCD3-216ENST00000487043 PDGFDQ9GZP0 370 aaPredicted RBP5.08□□□□□ -1.6
PTCD3-216ENST00000487043 BCAS3Q9H6U6 928 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms