RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 ZDHHC5Q9C0B5 715 aa6.44□□□□□ -1.38
COPS3-209ENST00000486810 MS4A5Q9H3V2 200 aa6.44□□□□□ -1.38
COPS3-209ENST00000486810 IFT57Q9NWB7 429 aa6.44□□□□□ -1.38
COPS3-209ENST00000486810 PHLDB1Q86UU1 1377 aa6.44□□□□□ -1.38
COPS3-209ENST00000486810 CCDC196A0A1B0GTZ2 297 aa6.43□□□□□ -1.38
COPS3-209ENST00000486810 LCHNA4D1U4 455 aa6.43□□□□□ -1.38
COPS3-209ENST00000486810 TPM3P06753 285 aa6.43□□□□□ -1.38
COPS3-209ENST00000486810 CT47B1P0C2W7 299 aaPredicted RBP6.43□□□□□ -1.38
COPS3-209ENST00000486810 FAM200BP0CF97 657 aa6.43□□□□□ -1.38
COPS3-209ENST00000486810 PAX7P23759 505 aa6.43□□□□□ -1.38
COPS3-209ENST00000486810 STAT3P40763 770 aa6.43□□□□□ -1.38
COPS3-209ENST00000486810 SLC6A3Q01959 620 aa6.43□□□□□ -1.38
COPS3-209ENST00000486810 NEXNQ0ZGT2 675 aa6.43□□□□□ -1.38
COPS3-209ENST00000486810 MYBPC3Q14896 1274 aa6.43□□□□□ -1.38
COPS3-209ENST00000486810 TBC1D10BQ4KMP7 808 aaPredicted RBP6.43□□□□□ -1.38
COPS3-209ENST00000486810 LRCH2Q5VUJ6 765 aa6.43□□□□□ -1.38
COPS3-209ENST00000486810 ICE2Q659A1 982 aa6.43□□□□□ -1.38
COPS3-209ENST00000486810 REXO1L1PQ8IX06 675 aa6.43□□□□□ -1.38
COPS3-209ENST00000486810 EFHBQ8N7U6 833 aa6.43□□□□□ -1.38
COPS3-209ENST00000486810 RTF1Q92541 710 aaKnown RBP6.43□□□□□ -1.38
COPS3-209ENST00000486810 MAML3Q96JK9 1138 aa6.43□□□□□ -1.38
COPS3-209ENST00000486810 RBM15Q96T37 977 aaKnown RBP eCLIP6.43□□□□□ -1.38
COPS3-209ENST00000486810 PTPN18Q99952 460 aa6.43□□□□□ -1.38
COPS3-209ENST00000486810 SEMA4AQ9H3S1 761 aa6.43□□□□□ -1.38
COPS3-209ENST00000486810 BARX1Q9HBU1 254 aaPredicted RBP6.43□□□□□ -1.38
COPS3-209ENST00000486810 TOMM22Q9NS69 142 aa6.43□□□□□ -1.38
COPS3-209ENST00000486810 CWC25Q9NXE8 425 aaPredicted RBP6.43□□□□□ -1.38
COPS3-209ENST00000486810 CDC42EP3Q9UKI2 254 aa6.43□□□□□ -1.38
COPS3-209ENST00000486810 RPGRIP1LQ68CZ1 1315 aa6.43□□□□□ -1.38
COPS3-209ENST00000486810 RAD54L2Q9Y4B4 1467 aa6.42□□□□□ -1.38
COPS3-209ENST00000486810 UBA6A0AVT1 1052 aaPredicted RBP6.42□□□□□ -1.38
COPS3-209ENST00000486810 B4GALT4O60513 344 aa6.42□□□□□ -1.38
COPS3-209ENST00000486810 FOXD2O60548 495 aaPredicted RBP6.42□□□□□ -1.38
COPS3-209ENST00000486810 CUTAO60888 179 aa6.42□□□□□ -1.38
COPS3-209ENST00000486810 MAFO75444 373 aaPredicted RBP6.42□□□□□ -1.38
COPS3-209ENST00000486810 CNOT4O95628 575 aaKnown RBP6.42□□□□□ -1.38
COPS3-209ENST00000486810 BPIP17213 487 aa6.42□□□□□ -1.38
COPS3-209ENST00000486810 ETV4P43268 484 aa6.42□□□□□ -1.38
COPS3-209ENST00000486810 PSMC1P62191 440 aaKnown RBP6.42□□□□□ -1.38
COPS3-209ENST00000486810 EIF4HQ15056 248 aaKnown RBP6.42□□□□□ -1.38
COPS3-209ENST00000486810 UBXN11Q5T124 520 aa6.42□□□□□ -1.38
COPS3-209ENST00000486810 TRIM68Q6AZZ1 485 aa6.42□□□□□ -1.38
COPS3-209ENST00000486810 CLEC4GQ6UXB4 293 aa6.42□□□□□ -1.38
COPS3-209ENST00000486810 MORC4Q8TE76 937 aa6.42□□□□□ -1.38
COPS3-209ENST00000486810 RELTQ969Z4 430 aa6.42□□□□□ -1.38
COPS3-209ENST00000486810 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.42□□□□□ -1.38
COPS3-209ENST00000486810 NCAPD3P42695 1498 aa6.41□□□□□ -1.38
COPS3-209ENST00000486810 A0A0G2JNJ9 132 aa6.41□□□□□ -1.38
COPS3-209ENST00000486810 ANKRD18BA2A2Z9 1011 aa6.41□□□□□ -1.38
COPS3-209ENST00000486810 FKBP9O95302 570 aa6.41□□□□□ -1.38
COPS3-209ENST00000486810 XRCC6P12956 609 aaKnown RBP eCLIP6.41□□□□□ -1.38
COPS3-209ENST00000486810 APEX1P27695 318 aaKnown RBP6.41□□□□□ -1.38
COPS3-209ENST00000486810 MAGEA8P43361 318 aa6.41□□□□□ -1.38
COPS3-209ENST00000486810 ID4P47928 161 aa6.41□□□□□ -1.38
COPS3-209ENST00000486810 LSSP48449 732 aa6.41□□□□□ -1.38
COPS3-209ENST00000486810 SCNN1BP51168 640 aa6.41□□□□□ -1.38
COPS3-209ENST00000486810 KCNQ1P51787 676 aa6.41□□□□□ -1.38
COPS3-209ENST00000486810 KPNA1P52294 538 aaPredicted RBP6.41□□□□□ -1.38
COPS3-209ENST00000486810 GSCP56915 257 aaPredicted RBP6.41□□□□□ -1.38
COPS3-209ENST00000486810 ANTXR2P58335 489 aa6.41□□□□□ -1.38
COPS3-209ENST00000486810 TBR1Q16650 682 aa6.41□□□□□ -1.38
COPS3-209ENST00000486810 ZNF827Q17R98 1081 aa6.41□□□□□ -1.38
COPS3-209ENST00000486810 BORAQ6PGQ7 559 aa6.41□□□□□ -1.38
COPS3-209ENST00000486810 FKBP9P1Q75LS8 142 aa6.41□□□□□ -1.38
COPS3-209ENST00000486810 RALYLQ86SE5 291 aaKnown RBP6.41□□□□□ -1.38
COPS3-209ENST00000486810 FAM124AQ86V42 546 aa6.41□□□□□ -1.38
COPS3-209ENST00000486810 OR2W6PQ8NHA6 318 aa6.41□□□□□ -1.38
COPS3-209ENST00000486810 EVI5LQ96CN4 794 aa6.41□□□□□ -1.38
COPS3-209ENST00000486810 AGAP3Q96P47 875 aa6.41□□□□□ -1.38
COPS3-209ENST00000486810 FAM126AQ9BYI3 521 aaPredicted RBP6.41□□□□□ -1.38
COPS3-209ENST00000486810 PPP4R1LQ9P1A2 415 aa6.41□□□□□ -1.38
COPS3-209ENST00000486810 Q9UFV3 132 aa6.41□□□□□ -1.38
COPS3-209ENST00000486810 SUN2Q9UH99 717 aa6.41□□□□□ -1.38
COPS3-209ENST00000486810 MAGEL2Q9UJ55 1249 aa6.41□□□□□ -1.38
COPS3-209ENST00000486810 ELL2O00472 640 aaPredicted RBP6.4□□□□□ -1.38
COPS3-209ENST00000486810 PLATP00750 562 aa6.4□□□□□ -1.38
COPS3-209ENST00000486810 SETSIPP0DME0 302 aa6.4□□□□□ -1.38
COPS3-209ENST00000486810 POU3F3P20264 500 aaPredicted RBP6.4□□□□□ -1.38
COPS3-209ENST00000486810 ABCD1P33897 745 aa6.4□□□□□ -1.38
COPS3-209ENST00000486810 COPB2P35606 906 aa6.4□□□□□ -1.38
COPS3-209ENST00000486810 MRE11P49959 708 aa6.4□□□□□ -1.38
COPS3-209ENST00000486810 STAT5BP51692 787 aa6.4□□□□□ -1.38
COPS3-209ENST00000486810 RRADP55042 308 aa6.4□□□□□ -1.38
COPS3-209ENST00000486810 USP10Q14694 798 aaKnown RBP6.4□□□□□ -1.38
COPS3-209ENST00000486810 NOLC1Q14978 699 aaKnown RBP eCLIP6.4□□□□□ -1.38
COPS3-209ENST00000486810 DHCR24Q15392 516 aa6.4□□□□□ -1.38
COPS3-209ENST00000486810 HSP90AB2PQ58FF8 381 aa6.4□□□□□ -1.38
COPS3-209ENST00000486810 TTC38Q5R3I4 469 aa6.4□□□□□ -1.38
COPS3-209ENST00000486810 GJC2Q5T442 439 aaPredicted RBP6.4□□□□□ -1.38
COPS3-209ENST00000486810 LCE1DQ5T752 114 aa6.4□□□□□ -1.38
COPS3-209ENST00000486810 GRAMD4Q6IC98 578 aa6.4□□□□□ -1.38
COPS3-209ENST00000486810 SLFN12LQ6IEE8 588 aa6.4□□□□□ -1.38
COPS3-209ENST00000486810 KLHL10Q6JEL2 608 aa6.4□□□□□ -1.38
COPS3-209ENST00000486810 UNQ6494/PRO21346Q6UXR6 183 aa6.4□□□□□ -1.38
COPS3-209ENST00000486810 KANSL1Q7Z3B3 1105 aa6.4□□□□□ -1.38
COPS3-209ENST00000486810 CALML6Q8TD86 181 aa6.4□□□□□ -1.38
COPS3-209ENST00000486810 TBC1D22AQ8WUA7 517 aa6.4□□□□□ -1.38
COPS3-209ENST00000486810 BDH2Q9BUT1 245 aa6.4□□□□□ -1.38
COPS3-209ENST00000486810 CARD11Q9BXL7 1154 aa6.4□□□□□ -1.38
COPS3-209ENST00000486810 MAF1Q9H063 256 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms