RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 RPN1P04843 607 aaKnown RBP14.15□□□□□ -0.14
HDAC6-229ENST00000486665 ACRP10323 421 aa14.15□□□□□ -0.14
HDAC6-229ENST00000486665 CYP2C9P11712 490 aa14.15□□□□□ -0.14
HDAC6-229ENST00000486665 IDEP14735 1019 aa14.15□□□□□ -0.14
HDAC6-229ENST00000486665 CSF2RAP15509 400 aa14.15□□□□□ -0.14
HDAC6-229ENST00000486665 SARSP49591 514 aaKnown RBP14.15□□□□□ -0.14
HDAC6-229ENST00000486665 ASIC1P78348 528 aa14.15□□□□□ -0.14
HDAC6-229ENST00000486665 TMEM240Q5SV17 173 aa14.15□□□□□ -0.14
HDAC6-229ENST00000486665 IER5Q5VY09 327 aa14.15□□□□□ -0.14
HDAC6-229ENST00000486665 MFSD5Q6N075 450 aa14.15□□□□□ -0.14
HDAC6-229ENST00000486665 FAM126BQ8IXS8 530 aa14.15□□□□□ -0.14
HDAC6-229ENST00000486665 KIAA0319LQ8IZA0 1049 aa14.15□□□□□ -0.14
HDAC6-229ENST00000486665 MCPH1Q8NEM0 835 aa14.15□□□□□ -0.14
HDAC6-229ENST00000486665 SPATA20Q8TB22 786 aa14.15□□□□□ -0.14
HDAC6-229ENST00000486665 ASAP3Q8TDY4 903 aa14.15□□□□□ -0.14
HDAC6-229ENST00000486665 PRPF31Q8WWY3 499 aaKnown RBP14.15□□□□□ -0.14
HDAC6-229ENST00000486665 BSNDQ8WZ55 320 aa14.15□□□□□ -0.14
HDAC6-229ENST00000486665 WNT8BQ93098 351 aa14.15□□□□□ -0.14
HDAC6-229ENST00000486665 HPS3Q969F9 1004 aa14.15□□□□□ -0.14
HDAC6-229ENST00000486665 CCDC34Q96HJ3 373 aa14.15□□□□□ -0.14
HDAC6-229ENST00000486665 JPH2Q9BR39 696 aaPredicted RBP14.15□□□□□ -0.14
HDAC6-229ENST00000486665 TIPINQ9BVW5 301 aa14.15□□□□□ -0.14
HDAC6-229ENST00000486665 PPP1R12CQ9BZL4 782 aa14.15□□□□□ -0.14
HDAC6-229ENST00000486665 POLR3FQ9H1D9 316 aaPredicted RBP14.15□□□□□ -0.14
HDAC6-229ENST00000486665 KIAA1468Q9P260 1216 aa14.15□□□□□ -0.14
HDAC6-229ENST00000486665 SUCLA2Q9P2R7 463 aaPredicted RBP14.15□□□□□ -0.14
HDAC6-229ENST00000486665 HOOK1Q9UJC3 728 aaKnown RBP14.15□□□□□ -0.14
HDAC6-229ENST00000486665 TMEM265A0A087WTH1 108 aa14.14□□□□□ -0.15
HDAC6-229ENST00000486665 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.14□□□□□ -0.15
HDAC6-229ENST00000486665 SMIM35A0A1B0GVV1 85 aa14.14□□□□□ -0.15
HDAC6-229ENST00000486665 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.14□□□□□ -0.15
HDAC6-229ENST00000486665 FRMD3A2A2Y4 597 aa14.14□□□□□ -0.15
HDAC6-229ENST00000486665 MYL1P05976 194 aa14.14□□□□□ -0.15
HDAC6-229ENST00000486665 GLRA2P23416 452 aa14.14□□□□□ -0.15
HDAC6-229ENST00000486665 ZNF131P52739 623 aa14.14□□□□□ -0.15
HDAC6-229ENST00000486665 PTGISQ16647 500 aa14.14□□□□□ -0.15
HDAC6-229ENST00000486665 KMT5BQ4FZB7 885 aa14.14□□□□□ -0.15
HDAC6-229ENST00000486665 RASIP1Q5U651 963 aa14.14□□□□□ -0.15
HDAC6-229ENST00000486665 UNC13DQ70J99 1090 aa14.14□□□□□ -0.15
HDAC6-229ENST00000486665 KSR1Q8IVT5 923 aa14.14□□□□□ -0.15
HDAC6-229ENST00000486665 EXOC8Q8IYI6 725 aa14.14□□□□□ -0.15
HDAC6-229ENST00000486665 RETREG2Q8NC44 543 aa14.14□□□□□ -0.15
HDAC6-229ENST00000486665 DNAJB3Q8WWF6 145 aa14.14□□□□□ -0.15
HDAC6-229ENST00000486665 FAM49AQ9H0Q0 323 aaPredicted RBP14.14□□□□□ -0.15
HDAC6-229ENST00000486665 ZHX3Q9H4I2 956 aa14.14□□□□□ -0.15
HDAC6-229ENST00000486665 PANK4Q9NVE7 773 aa14.14□□□□□ -0.15
HDAC6-229ENST00000486665 ODF2LQ9ULJ1 636 aa14.14□□□□□ -0.15
HDAC6-229ENST00000486665 MYO9BQ13459 2157 aa14.14□□□□□ -0.15
HDAC6-229ENST00000486665 UMODL1Q5DID0 1318 aa14.14□□□□□ -0.15
HDAC6-229ENST00000486665 PVALEFA0A1B0GWK0 134 aa14.13□□□□□ -0.15
HDAC6-229ENST00000486665 RBAK-RBAKDNI3L0D1 243 aa14.13□□□□□ -0.15
HDAC6-229ENST00000486665 B4GALT4O60513 344 aa14.13□□□□□ -0.15
HDAC6-229ENST00000486665 FAM13AO94988 1023 aa14.13□□□□□ -0.15
HDAC6-229ENST00000486665 SMC2O95347 1197 aa14.13□□□□□ -0.15
HDAC6-229ENST00000486665 CYP2C18P33260 490 aa14.13□□□□□ -0.15
HDAC6-229ENST00000486665 DNM2P50570 870 aa14.13□□□□□ -0.15
HDAC6-229ENST00000486665 COASYQ13057 564 aa14.13□□□□□ -0.15
HDAC6-229ENST00000486665 HERC4Q5GLZ8 1057 aaPredicted RBP14.13□□□□□ -0.15
HDAC6-229ENST00000486665 NT5DC1Q5TFE4 455 aa14.13□□□□□ -0.15
HDAC6-229ENST00000486665 ISM2Q6H9L7 571 aa14.13□□□□□ -0.15
HDAC6-229ENST00000486665 RBM43Q6ZSC3 357 aaKnown RBP14.13□□□□□ -0.15
HDAC6-229ENST00000486665 SERINC5Q86VE9 423 aa14.13□□□□□ -0.15
HDAC6-229ENST00000486665 CCDC65Q8IXS2 484 aa14.13□□□□□ -0.15
HDAC6-229ENST00000486665 MYCT1Q8N699 235 aa14.13□□□□□ -0.15
HDAC6-229ENST00000486665 TCP11Q8WWU5 503 aa14.13□□□□□ -0.15
HDAC6-229ENST00000486665 DHX38Q92620 1227 aaKnown RBP14.13□□□□□ -0.15
HDAC6-229ENST00000486665 KIFAP3Q92845 792 aa14.13□□□□□ -0.15
HDAC6-229ENST00000486665 SMARCE1Q969G3 411 aa14.13□□□□□ -0.15
HDAC6-229ENST00000486665 TIFAQ96CG3 184 aa14.13□□□□□ -0.15
HDAC6-229ENST00000486665 ZNF668Q96K58 619 aaPredicted RBP14.13□□□□□ -0.15
HDAC6-229ENST00000486665 SEZ6LQ9BYH1 1024 aa14.13□□□□□ -0.15
HDAC6-229ENST00000486665 PBX4Q9BYU1 374 aa14.13□□□□□ -0.15
HDAC6-229ENST00000486665 ZNF576Q9H609 170 aa14.13□□□□□ -0.15
HDAC6-229ENST00000486665 TBC1D7Q9P0N9 293 aa14.13□□□□□ -0.15
HDAC6-229ENST00000486665 CXXC1Q9P0U4 656 aaPredicted RBP14.13□□□□□ -0.15
HDAC6-229ENST00000486665 MAN1B1Q9UKM7 699 aa14.13□□□□□ -0.15
HDAC6-229ENST00000486665 COL4A3BPQ9Y5P4 624 aa14.13□□□□□ -0.15
HDAC6-229ENST00000486665 ARID2Q68CP9 1835 aa14.13□□□□□ -0.15
HDAC6-229ENST00000486665 GAS2O43903 313 aaKnown RBP14.12□□□□□ -0.15
HDAC6-229ENST00000486665 TBCAO75347 108 aaKnown RBP14.12□□□□□ -0.15
HDAC6-229ENST00000486665 CD4P01730 458 aa14.12□□□□□ -0.15
HDAC6-229ENST00000486665 VTNP04004 478 aa14.12□□□□□ -0.15
HDAC6-229ENST00000486665 PLS3P13797 630 aa14.12□□□□□ -0.15
HDAC6-229ENST00000486665 TMOD1P28289 359 aa14.12□□□□□ -0.15
HDAC6-229ENST00000486665 PEX3P56589 373 aa14.12□□□□□ -0.15
HDAC6-229ENST00000486665 EHHADHQ08426 723 aa14.12□□□□□ -0.15
HDAC6-229ENST00000486665 TMEM62Q0P6H9 643 aa14.12□□□□□ -0.15
HDAC6-229ENST00000486665 LAMTOR4Q0VGL1 99 aa14.12□□□□□ -0.15
HDAC6-229ENST00000486665 TRIM71Q2Q1W2 868 aaKnown RBP14.12□□□□□ -0.15
HDAC6-229ENST00000486665 ZNF365Q70YC5 407 aa14.12□□□□□ -0.15
HDAC6-229ENST00000486665 SFR1Q86XK3 245 aa14.12□□□□□ -0.15
HDAC6-229ENST00000486665 RHPN2Q8IUC4 686 aa14.12□□□□□ -0.15
HDAC6-229ENST00000486665 PSPC1Q8WXF1 523 aaKnown RBP14.12□□□□□ -0.15
HDAC6-229ENST00000486665 DRC1Q96MC2 740 aa14.12□□□□□ -0.15
HDAC6-229ENST00000486665 FIZ1Q96SL8 496 aa14.12□□□□□ -0.15
HDAC6-229ENST00000486665 PPP1R16BQ96T49 567 aa14.12□□□□□ -0.15
HDAC6-229ENST00000486665 FGFBP2Q9BYJ0 223 aa14.12□□□□□ -0.15
HDAC6-229ENST00000486665 PARVGQ9HBI0 331 aa14.12□□□□□ -0.15
HDAC6-229ENST00000486665 AKT3Q9Y243 479 aa14.12□□□□□ -0.15
HDAC6-229ENST00000486665 BIN1O00499 593 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms