RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 JRKLQ9Y4A0 524 aa22.22■■□□□ 1.15
HPS3-206ENST00000486530 POTEJP0CG39 1038 aa22.22■■□□□ 1.15
HPS3-206ENST00000486530 KRT13P13646 458 aa22.22■■□□□ 1.15
HPS3-206ENST00000486530 ANXA13P27216 316 aa22.22■■□□□ 1.15
HPS3-206ENST00000486530 PRKCIP41743 596 aa22.22■■□□□ 1.15
HPS3-206ENST00000486530 PPIL2Q13356 520 aa22.22■■□□□ 1.15
HPS3-206ENST00000486530 STXBP2Q15833 593 aa22.22■■□□□ 1.15
HPS3-206ENST00000486530 INTS8Q75QN2 995 aaKnown RBP22.22■■□□□ 1.15
HPS3-206ENST00000486530 IRF2BP2Q7Z5L9 587 aa22.22■■□□□ 1.15
HPS3-206ENST00000486530 RNF10Q8N5U6 811 aaKnown RBP22.22■■□□□ 1.15
HPS3-206ENST00000486530 KIFAP3Q92845 792 aa22.22■■□□□ 1.15
HPS3-206ENST00000486530 ARID3AQ99856 593 aa22.22■■□□□ 1.15
HPS3-206ENST00000486530 GPRC5CQ9NQ84 441 aa22.22■■□□□ 1.15
HPS3-206ENST00000486530 HDAC6Q9UBN7 1215 aa22.22■■□□□ 1.15
HPS3-206ENST00000486530 CAPN6Q9Y6Q1 641 aa22.22■■□□□ 1.15
HPS3-206ENST00000486530 POTEB2H3BUK9 544 aa22.21■■□□□ 1.15
HPS3-206ENST00000486530 ZNF862O60290 1169 aa22.21■■□□□ 1.15
HPS3-206ENST00000486530 EIF3JO75822 258 aaKnown RBP22.21■■□□□ 1.15
HPS3-206ENST00000486530 ICAM3P32942 547 aa22.21■■□□□ 1.15
HPS3-206ENST00000486530 SMTNP53814 917 aa22.21■■□□□ 1.15
HPS3-206ENST00000486530 ACTR2P61160 394 aa22.21■■□□□ 1.15
HPS3-206ENST00000486530 DMP1Q13316 513 aaPredicted RBP22.21■■□□□ 1.15
HPS3-206ENST00000486530 CEP170P1Q96L14 293 aa22.21■■□□□ 1.15
HPS3-206ENST00000486530 MLXIPQ9HAP2 919 aa22.21■■□□□ 1.15
HPS3-206ENST00000486530 C17orf75Q9HAS0 396 aa22.21■■□□□ 1.15
HPS3-206ENST00000486530 EXOC7Q9UPT5 735 aa22.21■■□□□ 1.15
HPS3-206ENST00000486530 MAPK13O15264 365 aa22.2■■□□□ 1.14
HPS3-206ENST00000486530 SLC16A4O15374 487 aa22.2■■□□□ 1.14
HPS3-206ENST00000486530 MYL7Q01449 175 aa22.2■■□□□ 1.14
HPS3-206ENST00000486530 CKAP4Q07065 602 aaKnown RBP22.2■■□□□ 1.14
HPS3-206ENST00000486530 MOGSQ13724 837 aa22.2■■□□□ 1.14
HPS3-206ENST00000486530 C10orf76Q5T2E6 689 aa22.2■■□□□ 1.14
HPS3-206ENST00000486530 MIS18BP1Q6P0N0 1132 aa22.2■■□□□ 1.14
HPS3-206ENST00000486530 TRMT1LQ7Z2T5 733 aaKnown RBP22.2■■□□□ 1.14
HPS3-206ENST00000486530 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.2■■□□□ 1.14
HPS3-206ENST00000486530 DDX41Q9UJV9 622 aaKnown RBP22.2■■□□□ 1.14
HPS3-206ENST00000486530 A0A087X0T9 212 aa22.2■■□□□ 1.14
HPS3-206ENST00000486530 STBD1O95210 358 aa22.2■■□□□ 1.14
HPS3-206ENST00000486530 MOCS3O95396 460 aa22.2■■□□□ 1.14
HPS3-206ENST00000486530 FAM228BP0C875 321 aa22.2■■□□□ 1.14
HPS3-206ENST00000486530 ZSCAN20P17040 1043 aaPredicted RBP22.2■■□□□ 1.14
HPS3-206ENST00000486530 IQCEQ6IPM2 695 aa22.2■■□□□ 1.14
HPS3-206ENST00000486530 SWSAP1Q6NVH7 229 aa22.2■■□□□ 1.14
HPS3-206ENST00000486530 ABHD15Q6UXT9 468 aa22.2■■□□□ 1.14
HPS3-206ENST00000486530 XXYLT1Q8NBI6 393 aa22.2■■□□□ 1.14
HPS3-206ENST00000486530 OPTNQ96CV9 577 aa22.2■■□□□ 1.14
HPS3-206ENST00000486530 BTBD7Q9P203 1132 aa22.2■■□□□ 1.14
HPS3-206ENST00000486530 CLEC11AQ9Y240 323 aa22.2■■□□□ 1.14
HPS3-206ENST00000486530 LRRC37A2A6NM11 1700 aa22.19■■□□□ 1.14
HPS3-206ENST00000486530 IGSF9BQ9UPX0 1349 aa22.19■■□□□ 1.14
HPS3-206ENST00000486530 N4BP1O75113 896 aaKnown RBP22.19■■□□□ 1.14
HPS3-206ENST00000486530 TFRCP02786 760 aaKnown RBP22.19■■□□□ 1.14
HPS3-206ENST00000486530 TRIM49P0CI25 452 aa22.19■■□□□ 1.14
HPS3-206ENST00000486530 TRIM49CP0CI26 452 aa22.19■■□□□ 1.14
HPS3-206ENST00000486530 ALDH5A1P51649 535 aaPredicted RBP22.19■■□□□ 1.14
HPS3-206ENST00000486530 PTK2Q05397 1052 aa22.19■■□□□ 1.14
HPS3-206ENST00000486530 CBWD6Q4V339 395 aa22.19■■□□□ 1.14
HPS3-206ENST00000486530 CBWD3Q5JTY5 395 aa22.19■■□□□ 1.14
HPS3-206ENST00000486530 CBWD5Q5RIA9 395 aa22.19■■□□□ 1.14
HPS3-206ENST00000486530 FMNL3Q8IVF7 1028 aa22.19■■□□□ 1.14
HPS3-206ENST00000486530 CCDC60Q8IWA6 550 aaPredicted RBP22.19■■□□□ 1.14
HPS3-206ENST00000486530 MCPH1Q8NEM0 835 aa22.19■■□□□ 1.14
HPS3-206ENST00000486530 SPIRE2Q8WWL2 714 aa22.19■■□□□ 1.14
HPS3-206ENST00000486530 NOX5Q96PH1 765 aa22.19■■□□□ 1.14
HPS3-206ENST00000486530 HSPBP1Q9NZL4 362 aa22.19■■□□□ 1.14
HPS3-206ENST00000486530 ATP8B3O60423 1300 aa22.18■■□□□ 1.14
HPS3-206ENST00000486530 PEX10O60683 326 aa22.18■■□□□ 1.14
HPS3-206ENST00000486530 DGAT1O75907 488 aa22.18■■□□□ 1.14
HPS3-206ENST00000486530 SUPT20HL2P0C7V6 817 aa22.18■■□□□ 1.14
HPS3-206ENST00000486530 FERP16591 822 aa22.18■■□□□ 1.14
HPS3-206ENST00000486530 NPTX2P47972 431 aa22.18■■□□□ 1.14
HPS3-206ENST00000486530 IRX3P78415 501 aaPredicted RBP22.18■■□□□ 1.14
HPS3-206ENST00000486530 PRKCEQ02156 737 aa22.18■■□□□ 1.14
HPS3-206ENST00000486530 TMCO3Q6UWJ1 677 aa22.18■■□□□ 1.14
HPS3-206ENST00000486530 TMEM161BQ8NDZ6 487 aa22.18■■□□□ 1.14
HPS3-206ENST00000486530 RPGRIP1Q96KN7 1286 aa22.18■■□□□ 1.14
HPS3-206ENST00000486530 CBWD1Q9BRT8 395 aa22.18■■□□□ 1.14
HPS3-206ENST00000486530 PARD6BQ9BYG5 372 aa22.18■■□□□ 1.14
HPS3-206ENST00000486530 SPATC1LQ9H0A9 340 aa22.18■■□□□ 1.14
HPS3-206ENST00000486530 PCIF1Q9H4Z3 704 aa22.18■■□□□ 1.14
HPS3-206ENST00000486530 ADAMTS1Q9UHI8 967 aa22.18■■□□□ 1.14
HPS3-206ENST00000486530 AJAP1Q9UKB5 411 aaPredicted RBP22.18■■□□□ 1.14
HPS3-206ENST00000486530 CCDC169A6NNP5 214 aa22.17■■□□□ 1.14
HPS3-206ENST00000486530 RFX1P22670 979 aa22.17■■□□□ 1.14
HPS3-206ENST00000486530 STAT1P42224 750 aa22.17■■□□□ 1.14
HPS3-206ENST00000486530 RTP1P59025 263 aa22.17■■□□□ 1.14
HPS3-206ENST00000486530 CNTN2Q02246 1040 aa22.17■■□□□ 1.14
HPS3-206ENST00000486530 ENOX2Q16206 610 aaKnown RBP22.17■■□□□ 1.14
HPS3-206ENST00000486530 MAP1SQ66K74 1059 aaPredicted RBP22.17■■□□□ 1.14
HPS3-206ENST00000486530 ZNF571Q7Z3V5 609 aaPredicted RBP22.17■■□□□ 1.14
HPS3-206ENST00000486530 VPS36Q86VN1 386 aa22.17■■□□□ 1.14
HPS3-206ENST00000486530 MAP4K3Q8IVH8 894 aa22.17■■□□□ 1.14
HPS3-206ENST00000486530 RDH13Q8NBN7 331 aa22.17■■□□□ 1.14
HPS3-206ENST00000486530 NTPCRQ9BSD7 190 aaKnown RBP22.17■■□□□ 1.14
HPS3-206ENST00000486530 INTS2Q9H0H0 1204 aaKnown RBP22.17■■□□□ 1.14
HPS3-206ENST00000486530 ASCC2Q9H1I8 757 aaPredicted RBP22.17■■□□□ 1.14
HPS3-206ENST00000486530 EPC1Q9H2F5 836 aa22.17■■□□□ 1.14
HPS3-206ENST00000486530 ZNF446Q9NWS9 450 aa22.17■■□□□ 1.14
HPS3-206ENST00000486530 SEPT9Q9UHD8 586 aaPredicted RBP22.17■■□□□ 1.14
HPS3-206ENST00000486530 TBX20Q9UMR3 447 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms