RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 GJB2P29033 226 aa14.37□□□□□ -0.11
CHMP3-208ENST00000486404 BMPR1AP36894 532 aa14.37□□□□□ -0.11
CHMP3-208ENST00000486404 DSC3Q14574 896 aa14.37□□□□□ -0.11
CHMP3-208ENST00000486404 HAUS3Q68CZ6 603 aa14.37□□□□□ -0.11
CHMP3-208ENST00000486404 TWF2Q6IBS0 349 aaKnown RBP14.37□□□□□ -0.11
CHMP3-208ENST00000486404 HLA-CQ95604 372 aa14.37□□□□□ -0.11
CHMP3-208ENST00000486404 PLVAPQ9BX97 442 aa14.37□□□□□ -0.11
CHMP3-208ENST00000486404 COL25A1Q9BXS0 654 aaPredicted RBP14.37□□□□□ -0.11
CHMP3-208ENST00000486404 LMAN2LQ9H0V9 348 aa14.37□□□□□ -0.11
CHMP3-208ENST00000486404 DHX33Q9H6R0 707 aaKnown RBP14.37□□□□□ -0.11
CHMP3-208ENST00000486404 ELAC1Q9H777 363 aaKnown RBP14.37□□□□□ -0.11
CHMP3-208ENST00000486404 AAASQ9NRG9 546 aa14.37□□□□□ -0.11
CHMP3-208ENST00000486404 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.37□□□□□ -0.11
CHMP3-208ENST00000486404 BRWD1Q9NSI6 2320 aa14.36□□□□□ -0.11
CHMP3-208ENST00000486404 C5orf67F2Z3F1 127 aa14.36□□□□□ -0.11
CHMP3-208ENST00000486404 DGAT1O75907 488 aa14.36□□□□□ -0.11
CHMP3-208ENST00000486404 SLITRK3O94933 977 aa14.36□□□□□ -0.11
CHMP3-208ENST00000486404 LYPLA2O95372 231 aa14.36□□□□□ -0.11
CHMP3-208ENST00000486404 SRGAP2CP0DJJ0 459 aa14.36□□□□□ -0.11
CHMP3-208ENST00000486404 FGFR1P11362 822 aa14.36□□□□□ -0.11
CHMP3-208ENST00000486404 TECP42680 631 aa14.36□□□□□ -0.11
CHMP3-208ENST00000486404 PHKA2P46019 1235 aa14.36□□□□□ -0.11
CHMP3-208ENST00000486404 TFDP1Q14186 410 aa14.36□□□□□ -0.11
CHMP3-208ENST00000486404 NBR1Q14596 966 aa14.36□□□□□ -0.11
CHMP3-208ENST00000486404 KSR1Q8IVT5 923 aa14.36□□□□□ -0.11
CHMP3-208ENST00000486404 CRIPAKQ8N1N5 446 aa14.36□□□□□ -0.11
CHMP3-208ENST00000486404 LRRC43Q8N309 656 aa14.36□□□□□ -0.11
CHMP3-208ENST00000486404 ZNF579Q8NAF0 562 aaKnown RBP14.36□□□□□ -0.11
CHMP3-208ENST00000486404 ASB2Q96Q27 587 aa14.36□□□□□ -0.11
CHMP3-208ENST00000486404 HSD17B14Q9BPX1 270 aa14.36□□□□□ -0.11
CHMP3-208ENST00000486404 RAB34Q9BZG1 259 aa14.36□□□□□ -0.11
CHMP3-208ENST00000486404 TUFT1Q9NNX1 390 aa14.36□□□□□ -0.11
CHMP3-208ENST00000486404 ANKEF1Q9NU02 776 aa14.36□□□□□ -0.11
CHMP3-208ENST00000486404 ZBTB39O15060 712 aa14.35□□□□□ -0.11
CHMP3-208ENST00000486404 USO1O60763 962 aaKnown RBP14.35□□□□□ -0.11
CHMP3-208ENST00000486404 ERLIN2O94905 339 aa14.35□□□□□ -0.11
CHMP3-208ENST00000486404 U2AF2P26368 475 aaKnown RBP eCLIP14.35□□□□□ -0.11
CHMP3-208ENST00000486404 RAB27AP51159 221 aa14.35□□□□□ -0.11
CHMP3-208ENST00000486404 TFF2Q03403 129 aa14.35□□□□□ -0.11
CHMP3-208ENST00000486404 LAMTOR4Q0VGL1 99 aa14.35□□□□□ -0.11
CHMP3-208ENST00000486404 FAM102BQ5T8I3 360 aa14.35□□□□□ -0.11
CHMP3-208ENST00000486404 ECHDC2Q86YB7 292 aa14.35□□□□□ -0.11
CHMP3-208ENST00000486404 RNF149Q8NC42 400 aa14.35□□□□□ -0.11
CHMP3-208ENST00000486404 PIGOQ8TEQ8 1089 aa14.35□□□□□ -0.11
CHMP3-208ENST00000486404 PRPF31Q8WWY3 499 aaKnown RBP14.35□□□□□ -0.11
CHMP3-208ENST00000486404 TMEM117Q9H0C3 514 aa14.35□□□□□ -0.11
CHMP3-208ENST00000486404 NSUN3Q9H649 340 aaKnown RBP14.35□□□□□ -0.11
CHMP3-208ENST00000486404 CHST12Q9NRB3 414 aa14.35□□□□□ -0.11
CHMP3-208ENST00000486404 PCDHB12Q9Y5F1 795 aa14.35□□□□□ -0.11
CHMP3-208ENST00000486404 ASAP2O43150 1006 aa14.34□□□□□ -0.11
CHMP3-208ENST00000486404 LINC00271P0C7V0 271 aa14.34□□□□□ -0.11
CHMP3-208ENST00000486404 SKIP12755 728 aa14.34□□□□□ -0.11
CHMP3-208ENST00000486404 LAG3P18627 525 aa14.34□□□□□ -0.11
CHMP3-208ENST00000486404 RARRES1P49788 294 aa14.34□□□□□ -0.11
CHMP3-208ENST00000486404 MXD4Q14582 209 aaPredicted RBP14.34□□□□□ -0.11
CHMP3-208ENST00000486404 CSPP1Q1MSJ5 1256 aa14.34□□□□□ -0.11
CHMP3-208ENST00000486404 NAALADL2Q58DX5 795 aa14.34□□□□□ -0.11
CHMP3-208ENST00000486404 POTEGQ6S5H5 508 aa14.34□□□□□ -0.11
CHMP3-208ENST00000486404 EP400NLQ6ZTU2 488 aa14.34□□□□□ -0.11
CHMP3-208ENST00000486404 SRGAP1Q7Z6B7 1085 aa14.34□□□□□ -0.11
CHMP3-208ENST00000486404 FERMT3Q86UX7 667 aa14.34□□□□□ -0.11
CHMP3-208ENST00000486404 THNSL1Q8IYQ7 743 aa14.34□□□□□ -0.11
CHMP3-208ENST00000486404 P2RX5Q93086 422 aa14.34□□□□□ -0.11
CHMP3-208ENST00000486404 PPP2R3CQ969Q6 453 aa14.34□□□□□ -0.11
CHMP3-208ENST00000486404 MRPL9Q9BYD2 267 aaKnown RBP14.34□□□□□ -0.11
CHMP3-208ENST00000486404 ALG13Q9NP73 1137 aaKnown RBP14.34□□□□□ -0.11
CHMP3-208ENST00000486404 AGPAT5Q9NUQ2 364 aa14.34□□□□□ -0.11
CHMP3-208ENST00000486404 TDRD15B5MCY1 1934 aaKnown RBP14.33□□□□□ -0.11
CHMP3-208ENST00000486404 ARHGEF35A5YM69 484 aa14.33□□□□□ -0.12
CHMP3-208ENST00000486404 LAD1O00515 517 aa14.33□□□□□ -0.12
CHMP3-208ENST00000486404 GRM6O15303 877 aa14.33□□□□□ -0.12
CHMP3-208ENST00000486404 MED24O75448 989 aa14.33□□□□□ -0.12
CHMP3-208ENST00000486404 CCT6AP40227 531 aaKnown RBP14.33□□□□□ -0.12
CHMP3-208ENST00000486404 FXR2P51116 673 aaKnown RBP eCLIP14.33□□□□□ -0.12
CHMP3-208ENST00000486404 FAM189BP81408 668 aa14.33□□□□□ -0.12
CHMP3-208ENST00000486404 RILPL1Q5EBL4 403 aa14.33□□□□□ -0.12
CHMP3-208ENST00000486404 TCEAL5Q5H9L2 206 aa14.33□□□□□ -0.12
CHMP3-208ENST00000486404 KLHL23Q8NBE8 558 aa14.33□□□□□ -0.12
CHMP3-208ENST00000486404 MCPH1Q8NEM0 835 aa14.33□□□□□ -0.12
CHMP3-208ENST00000486404 ADAMTS19Q8TE59 1207 aa14.33□□□□□ -0.12
CHMP3-208ENST00000486404 NACC1Q96RE7 527 aa14.33□□□□□ -0.12
CHMP3-208ENST00000486404 POLR3CQ9BUI4 534 aaPredicted RBP14.33□□□□□ -0.12
CHMP3-208ENST00000486404 POLR3FQ9H1D9 316 aaPredicted RBP14.33□□□□□ -0.12
CHMP3-208ENST00000486404 UBE2ZQ9H832 354 aaPredicted RBP14.33□□□□□ -0.12
CHMP3-208ENST00000486404 IFT122Q9HBG6 1241 aa14.33□□□□□ -0.12
CHMP3-208ENST00000486404 XPNPEP1Q9NQW7 623 aa14.33□□□□□ -0.12
CHMP3-208ENST00000486404 LRWD1Q9UFC0 647 aa14.33□□□□□ -0.12
CHMP3-208ENST00000486404 A0A0C4DFX4 3053 aa14.33□□□□□ -0.12
CHMP3-208ENST00000486404 MYO7AQ13402 2215 aa14.33□□□□□ -0.12
CHMP3-208ENST00000486404 MYH11P35749 1972 aa14.33□□□□□ -0.12
CHMP3-208ENST00000486404 A0A0U1RQF3 1178 aa14.32□□□□□ -0.12
CHMP3-208ENST00000486404 INO80B-WBP1J3KQ70 363 aa14.32□□□□□ -0.12
CHMP3-208ENST00000486404 EOMESO95936 686 aa14.32□□□□□ -0.12
CHMP3-208ENST00000486404 ITGB1P05556 798 aa14.32□□□□□ -0.12
CHMP3-208ENST00000486404 RPA1P27694 616 aa14.32□□□□□ -0.12
CHMP3-208ENST00000486404 KCNQ1P51787 676 aa14.32□□□□□ -0.12
CHMP3-208ENST00000486404 NCBP1Q09161 790 aaKnown RBP14.32□□□□□ -0.12
CHMP3-208ENST00000486404 PTGDRQ13258 359 aa14.32□□□□□ -0.12
CHMP3-208ENST00000486404 CATSPER3Q86XQ3 398 aa14.32□□□□□ -0.12
CHMP3-208ENST00000486404 COLGALT1Q8NBJ5 622 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms