RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 CXCL17Q6UXB2 119 aa16.06■□□□□ 0.16
POLR2J3-204ENST00000486319 LRRC55Q6ZSA7 311 aa16.06■□□□□ 0.16
POLR2J3-204ENST00000486319 OTUD6AQ7L8S5 288 aa16.06■□□□□ 0.16
POLR2J3-204ENST00000486319 NELFCDQ8IXH7 590 aa16.06■□□□□ 0.16
POLR2J3-204ENST00000486319 PRKAG2Q9UGJ0 569 aa16.06■□□□□ 0.16
POLR2J3-204ENST00000486319 TRAF3IP3Q9Y228 551 aa16.06■□□□□ 0.16
POLR2J3-204ENST00000486319 CEP290O15078 2479 aa16.06■□□□□ 0.16
POLR2J3-204ENST00000486319 AKR1B15C9JRZ8 316 aaPredicted RBP16.05■□□□□ 0.16
POLR2J3-204ENST00000486319 PDXKO00764 312 aa16.05■□□□□ 0.16
POLR2J3-204ENST00000486319 CABYRO75952 493 aa16.05■□□□□ 0.16
POLR2J3-204ENST00000486319 GCNT3O95395 438 aa16.05■□□□□ 0.16
POLR2J3-204ENST00000486319 TGFB3P10600 412 aa16.05■□□□□ 0.16
POLR2J3-204ENST00000486319 CASP5P51878 434 aa16.05■□□□□ 0.16
POLR2J3-204ENST00000486319 ACTR2P61160 394 aa16.05■□□□□ 0.16
POLR2J3-204ENST00000486319 UGCGQ16739 394 aa16.05■□□□□ 0.16
POLR2J3-204ENST00000486319 BRDTQ58F21 947 aaPredicted RBP16.05■□□□□ 0.16
POLR2J3-204ENST00000486319 MIS18BP1Q6P0N0 1132 aa16.05■□□□□ 0.16
POLR2J3-204ENST00000486319 CHRDL2Q6WN34 429 aa16.05■□□□□ 0.16
POLR2J3-204ENST00000486319 FAM178BQ8IXR5 827 aa16.05■□□□□ 0.16
POLR2J3-204ENST00000486319 COPS5Q92905 334 aa16.05■□□□□ 0.16
POLR2J3-204ENST00000486319 NOC4LQ9BVI4 516 aaKnown RBP16.05■□□□□ 0.16
POLR2J3-204ENST00000486319 TMX1Q9H3N1 280 aa16.05■□□□□ 0.16
POLR2J3-204ENST00000486319 LARSQ9P2J5 1176 aaKnown RBP16.05■□□□□ 0.16
POLR2J3-204ENST00000486319 COLQQ9Y215 455 aaPredicted RBP16.05■□□□□ 0.16
POLR2J3-204ENST00000486319 PES1O00541 588 aaKnown RBP16.04■□□□□ 0.16
POLR2J3-204ENST00000486319 PQBP1O60828 265 aaKnown RBP16.04■□□□□ 0.16
POLR2J3-204ENST00000486319 HIP1RO75146 1068 aa16.04■□□□□ 0.16
POLR2J3-204ENST00000486319 MYBP10242 640 aa16.04■□□□□ 0.16
POLR2J3-204ENST00000486319 MAPTP10636 758 aaKnown RBP16.04■□□□□ 0.16
POLR2J3-204ENST00000486319 TLE2Q04725 743 aa16.04■□□□□ 0.16
POLR2J3-204ENST00000486319 NEDD9Q14511 834 aa16.04■□□□□ 0.16
POLR2J3-204ENST00000486319 MAN2A1Q16706 1144 aa16.04■□□□□ 0.16
POLR2J3-204ENST00000486319 ODR4Q5SWX8 454 aa16.04■□□□□ 0.16
POLR2J3-204ENST00000486319 FKBP15Q5T1M5 1219 aa16.04■□□□□ 0.16
POLR2J3-204ENST00000486319 KCNV1Q6PIU1 500 aa16.04■□□□□ 0.16
POLR2J3-204ENST00000486319 ABHD15Q6UXT9 468 aa16.04■□□□□ 0.16
POLR2J3-204ENST00000486319 CNGA4Q8IV77 575 aa16.04■□□□□ 0.16
POLR2J3-204ENST00000486319 ZC3H3Q8IXZ2 948 aaKnown RBP16.04■□□□□ 0.16
POLR2J3-204ENST00000486319 TC2NQ8N9U0 490 aa16.04■□□□□ 0.16
POLR2J3-204ENST00000486319 CCDC51Q96ER9 411 aa16.04■□□□□ 0.16
POLR2J3-204ENST00000486319 TYW1Q9NV66 732 aaKnown RBP16.04■□□□□ 0.16
POLR2J3-204ENST00000486319 GABBR1Q9UBS5 961 aa16.04■□□□□ 0.16
POLR2J3-204ENST00000486319 DDX41Q9UJV9 622 aaKnown RBP16.04■□□□□ 0.16
POLR2J3-204ENST00000486319 A0A0U1RQG5 324 aaPredicted RBP16.04■□□□□ 0.16
POLR2J3-204ENST00000486319 SFI1A8K8P3 1242 aa16.04■□□□□ 0.16
POLR2J3-204ENST00000486319 CETN3O15182 167 aa16.04■□□□□ 0.16
POLR2J3-204ENST00000486319 PRPF6O94906 941 aaKnown RBP16.04■□□□□ 0.16
POLR2J3-204ENST00000486319 GH1P01241 217 aa16.04■□□□□ 0.16
POLR2J3-204ENST00000486319 SUPT20HL2P0C7V6 817 aa16.04■□□□□ 0.16
POLR2J3-204ENST00000486319 RPL13P26373 211 aaKnown RBP16.04■□□□□ 0.16
POLR2J3-204ENST00000486319 MARSP56192 900 aaKnown RBP16.04■□□□□ 0.16
POLR2J3-204ENST00000486319 TBC1D8BQ0IIM8 1120 aa16.04■□□□□ 0.16
POLR2J3-204ENST00000486319 VWA3BQ502W6 1294 aa16.04■□□□□ 0.16
POLR2J3-204ENST00000486319 XKR9Q5GH70 373 aa16.04■□□□□ 0.16
POLR2J3-204ENST00000486319 SWSAP1Q6NVH7 229 aa16.04■□□□□ 0.16
POLR2J3-204ENST00000486319 ZNF720Q7Z2F6 126 aa16.04■□□□□ 0.16
POLR2J3-204ENST00000486319 EEF2KMTQ96G04 330 aa16.04■□□□□ 0.16
POLR2J3-204ENST00000486319 DRC1Q96MC2 740 aa16.04■□□□□ 0.16
POLR2J3-204ENST00000486319 PANX2Q96RD6 677 aa16.04■□□□□ 0.16
POLR2J3-204ENST00000486319 PRDM5Q9NQX1 630 aaPredicted RBP16.04■□□□□ 0.16
POLR2J3-204ENST00000486319 KCND1Q9NSA2 647 aa16.04■□□□□ 0.16
POLR2J3-204ENST00000486319 PCDHB13Q9Y5F0 798 aa16.04■□□□□ 0.16
POLR2J3-204ENST00000486319 A6NJR5 290 aa16.03■□□□□ 0.16
POLR2J3-204ENST00000486319 DCDC2CA8MYV0 355 aa16.03■□□□□ 0.16
POLR2J3-204ENST00000486319 ARVCFO00192 962 aa16.03■□□□□ 0.16
POLR2J3-204ENST00000486319 STX10O60499 249 aa16.03■□□□□ 0.16
POLR2J3-204ENST00000486319 ATG7O95352 703 aa16.03■□□□□ 0.16
POLR2J3-204ENST00000486319 SP2Q02086 613 aa16.03■□□□□ 0.16
POLR2J3-204ENST00000486319 RBL2Q08999 1139 aa16.03■□□□□ 0.16
POLR2J3-204ENST00000486319 MAPK7Q13164 816 aa16.03■□□□□ 0.16
POLR2J3-204ENST00000486319 ADAM9Q13443 819 aa16.03■□□□□ 0.16
POLR2J3-204ENST00000486319 ALCAMQ13740 583 aa16.03■□□□□ 0.16
POLR2J3-204ENST00000486319 CCDC40Q4G0X9 1142 aa16.03■□□□□ 0.16
POLR2J3-204ENST00000486319 MIIPQ5JXC2 388 aa16.03■□□□□ 0.16
POLR2J3-204ENST00000486319 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.03■□□□□ 0.16
POLR2J3-204ENST00000486319 CYFIP1Q7L576 1253 aa16.03■□□□□ 0.16
POLR2J3-204ENST00000486319 ANKRD33Q7Z3H0 272 aa16.03■□□□□ 0.16
POLR2J3-204ENST00000486319 SLC17A8Q8NDX2 589 aa16.03■□□□□ 0.16
POLR2J3-204ENST00000486319 IQCDQ96DY2 449 aa16.03■□□□□ 0.16
POLR2J3-204ENST00000486319 TOX2Q96NM4 488 aa16.03■□□□□ 0.16
POLR2J3-204ENST00000486319 BAG1Q99933 345 aaPredicted RBP16.03■□□□□ 0.16
POLR2J3-204ENST00000486319 NUP58Q9BVL2 599 aa16.03■□□□□ 0.16
POLR2J3-204ENST00000486319 NAA15Q9BXJ9 866 aaKnown RBP16.03■□□□□ 0.16
POLR2J3-204ENST00000486319 MROH7Q68CQ1 1323 aa16.03■□□□□ 0.16
POLR2J3-204ENST00000486319 BACH1O14867 736 aa16.02■□□□□ 0.15
POLR2J3-204ENST00000486319 KPNA6O60684 536 aa16.02■□□□□ 0.15
POLR2J3-204ENST00000486319 USO1O60763 962 aaKnown RBP16.02■□□□□ 0.15
POLR2J3-204ENST00000486319 MFAP3LO75121 409 aa16.02■□□□□ 0.15
POLR2J3-204ENST00000486319 GYPCP04921 128 aa16.02■□□□□ 0.15
POLR2J3-204ENST00000486319 MYL3P08590 195 aa16.02■□□□□ 0.15
POLR2J3-204ENST00000486319 UBA1P22314 1058 aaKnown RBP16.02■□□□□ 0.15
POLR2J3-204ENST00000486319 NR2F2P24468 414 aa16.02■□□□□ 0.15
POLR2J3-204ENST00000486319 NMT1P30419 496 aaKnown RBP16.02■□□□□ 0.15
POLR2J3-204ENST00000486319 CDK7P50613 346 aa16.02■□□□□ 0.15
POLR2J3-204ENST00000486319 ADKP55263 362 aaKnown RBP16.02■□□□□ 0.15
POLR2J3-204ENST00000486319 ITGA7Q13683 1181 aa16.02■□□□□ 0.15
POLR2J3-204ENST00000486319 NFIL3Q16649 462 aa16.02■□□□□ 0.15
POLR2J3-204ENST00000486319 ANO5Q75V66 913 aa16.02■□□□□ 0.15
POLR2J3-204ENST00000486319 CCDC60Q8IWA6 550 aaPredicted RBP16.02■□□□□ 0.15
POLR2J3-204ENST00000486319 DAW1Q8N136 415 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms