RNA–Protein interactions for RNA: ENST00000486060.1

CCHCR1-214, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-214ENST00000486060 MCTP1Q6DN14 999 aa18.56■□□□□ 0.56
CCHCR1-214ENST00000486060 POTEGQ6S5H5 508 aa18.56■□□□□ 0.56
CCHCR1-214ENST00000486060 FAM43BQ6ZT52 329 aaPredicted RBP18.56■□□□□ 0.56
CCHCR1-214ENST00000486060 ZNF598Q86UK7 904 aaKnown RBP18.56■□□□□ 0.56
CCHCR1-214ENST00000486060 FERMT3Q86UX7 667 aa18.56■□□□□ 0.56
CCHCR1-214ENST00000486060 ECHDC2Q86YB7 292 aa18.56■□□□□ 0.56
CCHCR1-214ENST00000486060 PSPC1Q8WXF1 523 aaKnown RBP18.56■□□□□ 0.56
CCHCR1-214ENST00000486060 MTRQ99707 1265 aa18.56■□□□□ 0.56
CCHCR1-214ENST00000486060 POLR3CQ9BUI4 534 aaPredicted RBP18.56■□□□□ 0.56
CCHCR1-214ENST00000486060 TMEM161AQ9NX61 479 aa18.56■□□□□ 0.56
CCHCR1-214ENST00000486060 LRFN2Q9ULH4 789 aa18.56■□□□□ 0.56
CCHCR1-214ENST00000486060 KIF3AQ9Y496 699 aa18.56■□□□□ 0.56
CCHCR1-214ENST00000486060 TDRD15B5MCY1 1934 aaKnown RBP18.56■□□□□ 0.56
CCHCR1-214ENST00000486060 CUL9Q8IWT3 2517 aa18.56■□□□□ 0.56
CCHCR1-214ENST00000486060 MUC3AQ02505 3323 aa18.55■□□□□ 0.56
CCHCR1-214ENST00000486060 GRM6O15303 877 aa18.55■□□□□ 0.56
CCHCR1-214ENST00000486060 SRGAP2CP0DJJ0 459 aa18.55■□□□□ 0.56
CCHCR1-214ENST00000486060 RPA1P27694 616 aa18.55■□□□□ 0.56
CCHCR1-214ENST00000486060 CDC42EP1Q00587 391 aa18.55■□□□□ 0.56
CCHCR1-214ENST00000486060 ASAP3Q8TDY4 903 aa18.55■□□□□ 0.56
CCHCR1-214ENST00000486060 ELAC1Q9H777 363 aaKnown RBP18.55■□□□□ 0.56
CCHCR1-214ENST00000486060 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.55■□□□□ 0.56
CCHCR1-214ENST00000486060 TRIP11Q15643 1979 aa18.55■□□□□ 0.56
CCHCR1-214ENST00000486060 PP2D1A8MPX8 630 aa18.54■□□□□ 0.56
CCHCR1-214ENST00000486060 GAS2O43903 313 aaKnown RBP18.54■□□□□ 0.56
CCHCR1-214ENST00000486060 XRCC6P12956 609 aaKnown RBP eCLIP18.54■□□□□ 0.56
CCHCR1-214ENST00000486060 ARL2P36404 184 aa18.54■□□□□ 0.56
CCHCR1-214ENST00000486060 CAMK1Q14012 370 aa18.54■□□□□ 0.56
CCHCR1-214ENST00000486060 CLLU1OSQ5K130 101 aa18.54■□□□□ 0.56
CCHCR1-214ENST00000486060 LARP1BQ659C4 914 aaKnown RBP18.54■□□□□ 0.56
CCHCR1-214ENST00000486060 IGSF22Q8N9C0 903 aa18.54■□□□□ 0.56
CCHCR1-214ENST00000486060 MRPL38Q96DV4 380 aaKnown RBP18.54■□□□□ 0.56
CCHCR1-214ENST00000486060 A0A0U1RQF3 1178 aa18.53■□□□□ 0.56
CCHCR1-214ENST00000486060 TBKBP1A7MCY6 615 aa18.53■□□□□ 0.56
CCHCR1-214ENST00000486060 H3BQV1 296 aa18.53■□□□□ 0.56
CCHCR1-214ENST00000486060 USO1O60763 962 aaKnown RBP18.53■□□□□ 0.56
CCHCR1-214ENST00000486060 DGAT1O75907 488 aa18.53■□□□□ 0.56
CCHCR1-214ENST00000486060 RB1P06400 928 aa18.53■□□□□ 0.56
CCHCR1-214ENST00000486060 ZSCAN20P17040 1043 aaPredicted RBP18.53■□□□□ 0.56
CCHCR1-214ENST00000486060 GLRA2P23416 452 aa18.53■□□□□ 0.56
CCHCR1-214ENST00000486060 DNAJB1P25685 340 aa18.53■□□□□ 0.56
CCHCR1-214ENST00000486060 TFF2Q03403 129 aa18.53■□□□□ 0.56
CCHCR1-214ENST00000486060 CAPSQ13938 189 aa18.53■□□□□ 0.56
CCHCR1-214ENST00000486060 LRRC55Q6ZSA7 311 aa18.53■□□□□ 0.56
CCHCR1-214ENST00000486060 EXOC8Q8IYI6 725 aa18.53■□□□□ 0.56
CCHCR1-214ENST00000486060 RNF149Q8NC42 400 aa18.53■□□□□ 0.56
CCHCR1-214ENST00000486060 TCP11Q8WWU5 503 aa18.53■□□□□ 0.56
CCHCR1-214ENST00000486060 CASD1Q96PB1 797 aa18.53■□□□□ 0.56
CCHCR1-214ENST00000486060 MMTAG2Q9BU76 263 aaKnown RBP18.53■□□□□ 0.56
CCHCR1-214ENST00000486060 COL25A1Q9BXS0 654 aaPredicted RBP18.53■□□□□ 0.56
CCHCR1-214ENST00000486060 CWH43Q9H720 699 aa18.53■□□□□ 0.56
CCHCR1-214ENST00000486060 ATP6V0A4Q9HBG4 840 aa18.53■□□□□ 0.56
CCHCR1-214ENST00000486060 GPRC5CQ9NQ84 441 aa18.53■□□□□ 0.56
CCHCR1-214ENST00000486060 THEGQ9P2T0 379 aa18.53■□□□□ 0.56
CCHCR1-214ENST00000486060 DBR1Q9UK59 544 aaKnown RBP18.53■□□□□ 0.56
CCHCR1-214ENST00000486060 MEIS3P2A8K0S8 358 aa18.52■□□□□ 0.56
CCHCR1-214ENST00000486060 ITGB1P05556 798 aa18.52■□□□□ 0.56
CCHCR1-214ENST00000486060 SFPQP23246 707 aaKnown RBP eCLIP18.52■□□□□ 0.56
CCHCR1-214ENST00000486060 CDC25AP30304 524 aa18.52■□□□□ 0.56
CCHCR1-214ENST00000486060 HOXA11P31270 313 aaPredicted RBP18.52■□□□□ 0.56
CCHCR1-214ENST00000486060 ATP2C1P98194 919 aaPredicted RBP18.52■□□□□ 0.56
CCHCR1-214ENST00000486060 RILPL1Q5EBL4 403 aa18.52■□□□□ 0.56
CCHCR1-214ENST00000486060 CATSPER4Q7RTX7 472 aa18.52■□□□□ 0.56
CCHCR1-214ENST00000486060 SRGAP1Q7Z6B7 1085 aa18.52■□□□□ 0.56
CCHCR1-214ENST00000486060 NACC1Q96RE7 527 aa18.52■□□□□ 0.56
CCHCR1-214ENST00000486060 TRAIPQ9BWF2 469 aa18.52■□□□□ 0.56
CCHCR1-214ENST00000486060 INO80BQ9C086 356 aaPredicted RBP18.52■□□□□ 0.56
CCHCR1-214ENST00000486060 ALG13Q9NP73 1137 aaKnown RBP18.52■□□□□ 0.56
CCHCR1-214ENST00000486060 CHST12Q9NRB3 414 aa18.52■□□□□ 0.56
CCHCR1-214ENST00000486060 AGPAT5Q9NUQ2 364 aa18.52■□□□□ 0.56
CCHCR1-214ENST00000486060 TYW1Q9NV66 732 aaKnown RBP18.52■□□□□ 0.56
CCHCR1-214ENST00000486060 LRWD1Q9UFC0 647 aa18.52■□□□□ 0.56
CCHCR1-214ENST00000486060 PIN4Q9Y237 131 aaKnown RBP18.52■□□□□ 0.56
CCHCR1-214ENST00000486060 NCOR1O75376 2440 aa18.52■□□□□ 0.55
CCHCR1-214ENST00000486060 TTC28Q96AY4 2481 aa18.51■□□□□ 0.55
CCHCR1-214ENST00000486060 ASAP2O43150 1006 aa18.51■□□□□ 0.55
CCHCR1-214ENST00000486060 CCT6AP40227 531 aaKnown RBP18.51■□□□□ 0.55
CCHCR1-214ENST00000486060 PRPHP41219 470 aa18.51■□□□□ 0.55
CCHCR1-214ENST00000486060 PHKA2P46019 1235 aa18.51■□□□□ 0.55
CCHCR1-214ENST00000486060 PTENP60484 403 aa18.51■□□□□ 0.55
CCHCR1-214ENST00000486060 PDIA5Q14554 519 aa18.51■□□□□ 0.55
CCHCR1-214ENST00000486060 UBXN11Q5T124 520 aa18.51■□□□□ 0.55
CCHCR1-214ENST00000486060 MAEAQ7L5Y9 396 aa18.51■□□□□ 0.55
CCHCR1-214ENST00000486060 IFNLR1Q8IU57 520 aaPredicted RBP18.51■□□□□ 0.55
CCHCR1-214ENST00000486060 KLHL23Q8NBE8 558 aa18.51■□□□□ 0.55
CCHCR1-214ENST00000486060 C11orf84Q9BUA3 381 aaPredicted RBP18.51■□□□□ 0.55
CCHCR1-214ENST00000486060 POLR3FQ9H1D9 316 aaPredicted RBP18.51■□□□□ 0.55
CCHCR1-214ENST00000486060 PLAGL2Q9UPG8 496 aa18.51■□□□□ 0.55
CCHCR1-214ENST00000486060 RWDD3Q9Y3V2 267 aa18.51■□□□□ 0.55
CCHCR1-214ENST00000486060 C5orf42Q9H799 3197 aa18.5■□□□□ 0.55
CCHCR1-214ENST00000486060 MXD4Q14582 209 aaPredicted RBP18.5■□□□□ 0.55
CCHCR1-214ENST00000486060 SKIV2LQ15477 1246 aaKnown RBP18.5■□□□□ 0.55
CCHCR1-214ENST00000486060 AMHR2Q16671 573 aa18.5■□□□□ 0.55
CCHCR1-214ENST00000486060 LONRF3Q496Y0 759 aa18.5■□□□□ 0.55
CCHCR1-214ENST00000486060 KCNK18Q7Z418 384 aa18.5■□□□□ 0.55
CCHCR1-214ENST00000486060 RNF169Q8NCN4 708 aa18.5■□□□□ 0.55
CCHCR1-214ENST00000486060 ERMNQ8TAM6 284 aa18.5■□□□□ 0.55
CCHCR1-214ENST00000486060 SPPL3Q8TCT6 385 aa18.5■□□□□ 0.55
CCHCR1-214ENST00000486060 BSNDQ8WZ55 320 aa18.5■□□□□ 0.55
CCHCR1-214ENST00000486060 LPPQ93052 612 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms