RNA–Protein interactions for RNA: ENST00000485901.1

HLA-DOA-204, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-204ENST00000485901 TARBP2Q15633 366 aaKnown RBP13.4□□□□□ -0.26
HLA-DOA-204ENST00000485901 TMEM266Q2M3C6 531 aa13.4□□□□□ -0.26
HLA-DOA-204ENST00000485901 EFCAB12Q6NXP0 572 aa13.4□□□□□ -0.26
HLA-DOA-204ENST00000485901 EP400NLQ6ZTU2 488 aa13.4□□□□□ -0.26
HLA-DOA-204ENST00000485901 BRAPQ7Z569 592 aa13.4□□□□□ -0.26
HLA-DOA-204ENST00000485901 EXOC8Q8IYI6 725 aa13.4□□□□□ -0.26
HLA-DOA-204ENST00000485901 ZNF710Q8N1W2 664 aa13.4□□□□□ -0.26
HLA-DOA-204ENST00000485901 C4orf32Q8N8J7 132 aa13.4□□□□□ -0.26
HLA-DOA-204ENST00000485901 DYDC2Q96IM9 177 aa13.4□□□□□ -0.26
HLA-DOA-204ENST00000485901 MSLNLQ96KJ4 702 aa13.4□□□□□ -0.26
HLA-DOA-204ENST00000485901 CDCA3Q99618 268 aaPredicted RBP13.4□□□□□ -0.26
HLA-DOA-204ENST00000485901 LXNQ9BS40 222 aa13.4□□□□□ -0.26
HLA-DOA-204ENST00000485901 IRF2BPLQ9H1B7 796 aa13.4□□□□□ -0.26
HLA-DOA-204ENST00000485901 PPME1Q9Y570 386 aa13.4□□□□□ -0.26
HLA-DOA-204ENST00000485901 CDY2AQ9Y6F7 541 aa13.4□□□□□ -0.26
HLA-DOA-204ENST00000485901 MYH9P35579 1960 aaKnown RBP13.4□□□□□ -0.27
HLA-DOA-204ENST00000485901 PDIA4P13667 645 aaKnown RBP13.39□□□□□ -0.27
HLA-DOA-204ENST00000485901 ATF7P17544 494 aaPredicted RBP13.39□□□□□ -0.27
HLA-DOA-204ENST00000485901 DNM2P50570 870 aa13.39□□□□□ -0.27
HLA-DOA-204ENST00000485901 NUBP1P53384 320 aa13.39□□□□□ -0.27
HLA-DOA-204ENST00000485901 CAMK1Q14012 370 aa13.39□□□□□ -0.27
HLA-DOA-204ENST00000485901 CTTNQ14247 550 aaKnown RBP13.39□□□□□ -0.27
HLA-DOA-204ENST00000485901 PDIA5Q14554 519 aa13.39□□□□□ -0.27
HLA-DOA-204ENST00000485901 MTERF2Q49AM1 385 aa13.39□□□□□ -0.27
HLA-DOA-204ENST00000485901 HFE2Q6ZVN8 426 aa13.39□□□□□ -0.27
HLA-DOA-204ENST00000485901 ANO5Q75V66 913 aa13.39□□□□□ -0.27
HLA-DOA-204ENST00000485901 RNF135Q8IUD6 432 aa13.39□□□□□ -0.27
HLA-DOA-204ENST00000485901 SMRP1Q8NCR6 262 aa13.39□□□□□ -0.27
HLA-DOA-204ENST00000485901 ERMNQ8TAM6 284 aa13.39□□□□□ -0.27
HLA-DOA-204ENST00000485901 SPPL3Q8TCT6 385 aa13.39□□□□□ -0.27
HLA-DOA-204ENST00000485901 JPH2Q9BR39 696 aaPredicted RBP13.39□□□□□ -0.27
HLA-DOA-204ENST00000485901 CELF4Q9BZC1 486 aaKnown RBP13.39□□□□□ -0.27
HLA-DOA-204ENST00000485901 RAB34Q9BZG1 259 aa13.39□□□□□ -0.27
HLA-DOA-204ENST00000485901 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.39□□□□□ -0.27
HLA-DOA-204ENST00000485901 AAASQ9NRG9 546 aa13.39□□□□□ -0.27
HLA-DOA-204ENST00000485901 TRPV2Q9Y5S1 764 aa13.39□□□□□ -0.27
HLA-DOA-204ENST00000485901 STK24Q9Y6E0 443 aa13.39□□□□□ -0.27
HLA-DOA-204ENST00000485901 POTEMA6NI47 508 aa13.38□□□□□ -0.27
HLA-DOA-204ENST00000485901 LOC730098B7Z3J9 87 aa13.38□□□□□ -0.27
HLA-DOA-204ENST00000485901 TBX10O75333 385 aa13.38□□□□□ -0.27
HLA-DOA-204ENST00000485901 LYPLA2O95372 231 aa13.38□□□□□ -0.27
HLA-DOA-204ENST00000485901 XRCC6P12956 609 aaKnown RBP eCLIP13.38□□□□□ -0.27
HLA-DOA-204ENST00000485901 YWHABP31946 246 aaKnown RBP13.38□□□□□ -0.27
HLA-DOA-204ENST00000485901 PRPHP41219 470 aa13.38□□□□□ -0.27
HLA-DOA-204ENST00000485901 FXR2P51116 673 aaKnown RBP eCLIP13.38□□□□□ -0.27
HLA-DOA-204ENST00000485901 CDC42EP1Q00587 391 aa13.38□□□□□ -0.27
HLA-DOA-204ENST00000485901 CYP4A11Q02928 519 aa13.38□□□□□ -0.27
HLA-DOA-204ENST00000485901 TMEM62Q0P6H9 643 aa13.38□□□□□ -0.27
HLA-DOA-204ENST00000485901 DTHD1Q6ZMT9 781 aa13.38□□□□□ -0.27
HLA-DOA-204ENST00000485901 CEP170P1Q96L14 293 aa13.38□□□□□ -0.27
HLA-DOA-204ENST00000485901 MAP7D2Q96T17 732 aa13.38□□□□□ -0.27
HLA-DOA-204ENST00000485901 TUFT1Q9NNX1 390 aa13.38□□□□□ -0.27
HLA-DOA-204ENST00000485901 CYP26B1Q9NR63 512 aa13.38□□□□□ -0.27
HLA-DOA-204ENST00000485901 WRAP73Q9P2S5 460 aaPredicted RBP13.38□□□□□ -0.27
HLA-DOA-204ENST00000485901 TMEM150BA6NC51 233 aa13.37□□□□□ -0.27
HLA-DOA-204ENST00000485901 STX6O43752 255 aa13.37□□□□□ -0.27
HLA-DOA-204ENST00000485901 ITGB1P05556 798 aa13.37□□□□□ -0.27
HLA-DOA-204ENST00000485901 NDUFV1P49821 464 aa13.37□□□□□ -0.27
HLA-DOA-204ENST00000485901 CRYBB1P53674 252 aaPredicted RBP13.37□□□□□ -0.27
HLA-DOA-204ENST00000485901 PTPN5P54829 565 aa13.37□□□□□ -0.27
HLA-DOA-204ENST00000485901 DLX2Q07687 328 aaPredicted RBP13.37□□□□□ -0.27
HLA-DOA-204ENST00000485901 RTN4RL1Q86UN2 441 aaPredicted RBP13.37□□□□□ -0.27
HLA-DOA-204ENST00000485901 CATSPER3Q86XQ3 398 aa13.37□□□□□ -0.27
HLA-DOA-204ENST00000485901 SLC7A3Q8WY07 619 aa13.37□□□□□ -0.27
HLA-DOA-204ENST00000485901 CEP89Q96ST8 783 aa13.37□□□□□ -0.27
HLA-DOA-204ENST00000485901 SH2D3AQ9BRG2 576 aa13.37□□□□□ -0.27
HLA-DOA-204ENST00000485901 POLR3CQ9BUI4 534 aaPredicted RBP13.37□□□□□ -0.27
HLA-DOA-204ENST00000485901 AGO3Q9H9G7 860 aaKnown RBP13.37□□□□□ -0.27
HLA-DOA-204ENST00000485901 C1orf112Q9NSG2 853 aa13.37□□□□□ -0.27
HLA-DOA-204ENST00000485901 ANKEF1Q9NU02 776 aa13.37□□□□□ -0.27
HLA-DOA-204ENST00000485901 AKT3Q9Y243 479 aa13.37□□□□□ -0.27
HLA-DOA-204ENST00000485901 GINS2Q9Y248 185 aa13.37□□□□□ -0.27
HLA-DOA-204ENST00000485901 PCDHB12Q9Y5F1 795 aa13.37□□□□□ -0.27
HLA-DOA-204ENST00000485901 FNDC1Q4ZHG4 1894 aaPredicted RBP13.37□□□□□ -0.27
HLA-DOA-204ENST00000485901 EVPLQ92817 2033 aa13.37□□□□□ -0.27
HLA-DOA-204ENST00000485901 KIAA1671Q9BY89 1806 aa13.36□□□□□ -0.27
HLA-DOA-204ENST00000485901 IGKV6-21A0A0C4DH24 114 aa13.36□□□□□ -0.27
HLA-DOA-204ENST00000485901 MAFO75444 373 aaPredicted RBP13.36□□□□□ -0.27
HLA-DOA-204ENST00000485901 BMP15O95972 392 aa13.36□□□□□ -0.27
HLA-DOA-204ENST00000485901 MUTP22033 750 aa13.36□□□□□ -0.27
HLA-DOA-204ENST00000485901 RPA1P27694 616 aa13.36□□□□□ -0.27
HLA-DOA-204ENST00000485901 CD52P31358 61 aa13.36□□□□□ -0.27
HLA-DOA-204ENST00000485901 RFC5P40937 340 aa13.36□□□□□ -0.27
HLA-DOA-204ENST00000485901 SARSP49591 514 aaKnown RBP13.36□□□□□ -0.27
HLA-DOA-204ENST00000485901 CLCN3P51790 818 aa13.36□□□□□ -0.27
HLA-DOA-204ENST00000485901 NPEPPSP55786 919 aa13.36□□□□□ -0.27
HLA-DOA-204ENST00000485901 ATP2C1P98194 919 aaPredicted RBP13.36□□□□□ -0.27
HLA-DOA-204ENST00000485901 PAK2Q13177 524 aa13.36□□□□□ -0.27
HLA-DOA-204ENST00000485901 XKR9Q5GH70 373 aa13.36□□□□□ -0.27
HLA-DOA-204ENST00000485901 ARL6IP4Q66PJ3 421 aaKnown RBP13.36□□□□□ -0.27
HLA-DOA-204ENST00000485901 HAUS3Q68CZ6 603 aa13.36□□□□□ -0.27
HLA-DOA-204ENST00000485901 PLA2G4FQ68DD2 849 aa13.36□□□□□ -0.27
HLA-DOA-204ENST00000485901 TMEM184AQ6ZMB5 413 aa13.36□□□□□ -0.27
HLA-DOA-204ENST00000485901 TRIM67Q6ZTA4 783 aa13.36□□□□□ -0.27
HLA-DOA-204ENST00000485901 FERMT3Q86UX7 667 aa13.36□□□□□ -0.27
HLA-DOA-204ENST00000485901 LRRC71Q8N4P6 559 aa13.36□□□□□ -0.27
HLA-DOA-204ENST00000485901 LINC01465Q8N7H1 131 aa13.36□□□□□ -0.27
HLA-DOA-204ENST00000485901 KLHL23Q8NBE8 558 aa13.36□□□□□ -0.27
HLA-DOA-204ENST00000485901 POF1BQ8WVV4 589 aa13.36□□□□□ -0.27
HLA-DOA-204ENST00000485901 NACC1Q96RE7 527 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms