RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, human

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN1-215	ENST00000485550	THNSL1	Q8IYQ7	743 aa		11.95	□□□□□ -0.5
HMGN1-215	ENST00000485550	BBX	Q8WY36	941 aa	Predicted RBP	11.95	□□□□□ -0.5
HMGN1-215	ENST00000485550	ZNF668	Q96K58	619 aa	Predicted RBP	11.95	□□□□□ -0.5
HMGN1-215	ENST00000485550	CDCA3	Q99618	268 aa	Predicted RBP	11.95	□□□□□ -0.5
HMGN1-215	ENST00000485550	OSMR	Q99650	979 aa		11.95	□□□□□ -0.5
HMGN1-215	ENST00000485550	ADAM2	Q99965	735 aa		11.95	□□□□□ -0.5
HMGN1-215	ENST00000485550	ERVK-5	Q9HDB9	667 aa		11.95	□□□□□ -0.5
HMGN1-215	ENST00000485550	SORCS3	Q9UPU3	1222 aa		11.95	□□□□□ -0.5
HMGN1-215	ENST00000485550	PCDHB7	Q9Y5E2	793 aa		11.95	□□□□□ -0.5
HMGN1-215	ENST00000485550	MAFB	Q9Y5Q3	323 aa	Predicted RBP	11.95	□□□□□ -0.5
HMGN1-215	ENST00000485550	CYP46A1	Q9Y6A2	500 aa		11.95	□□□□□ -0.5
HMGN1-215	ENST00000485550	ZNF292	O60281	2723 aa		11.95	□□□□□ -0.5
HMGN1-215	ENST00000485550	DENND4A	Q7Z401	1863 aa		11.95	□□□□□ -0.5
HMGN1-215	ENST00000485550	FANCM	Q8IYD8	2048 aa		11.94	□□□□□ -0.5
HMGN1-215	ENST00000485550	NID2	Q14112	1375 aa		11.94	□□□□□ -0.5
HMGN1-215	ENST00000485550	KDM3A	Q9Y4C1	1321 aa		11.94	□□□□□ -0.5
HMGN1-215	ENST00000485550	DMXL1	Q9Y485	3027 aa		11.94	□□□□□ -0.5
HMGN1-215	ENST00000485550	DENND3	A2RUS2	1198 aa		11.94	□□□□□ -0.5
HMGN1-215	ENST00000485550	C2CD4D	B7Z1M9	353 aa		11.94	□□□□□ -0.5
HMGN1-215	ENST00000485550	RIOK3	O14730	519 aa	Known RBP	11.94	□□□□□ -0.5
HMGN1-215	ENST00000485550	CPLX1	O14810	134 aa		11.94	□□□□□ -0.5
HMGN1-215	ENST00000485550	FSCN2	O14926	492 aa		11.94	□□□□□ -0.5
HMGN1-215	ENST00000485550	MSH4	O15457	936 aa		11.94	□□□□□ -0.5
HMGN1-215	ENST00000485550	SRGAP2B	P0DMP2	458 aa		11.94	□□□□□ -0.5
HMGN1-215	ENST00000485550	CLCN3	P51790	818 aa		11.94	□□□□□ -0.5
HMGN1-215	ENST00000485550	EVC	P57679	992 aa		11.94	□□□□□ -0.5
HMGN1-215	ENST00000485550	UBE3A	Q05086	875 aa		11.94	□□□□□ -0.5
HMGN1-215	ENST00000485550	KCNC3	Q14003	757 aa		11.94	□□□□□ -0.5
HMGN1-215	ENST00000485550	FAM102B	Q5T8I3	360 aa		11.94	□□□□□ -0.5
HMGN1-215	ENST00000485550	SMAP1	Q8IYB5	467 aa	Predicted RBP	11.94	□□□□□ -0.5
HMGN1-215	ENST00000485550	TRIM22	Q8IYM9	498 aa		11.94	□□□□□ -0.5
HMGN1-215	ENST00000485550	LRRC71	Q8N4P6	559 aa		11.94	□□□□□ -0.5
HMGN1-215	ENST00000485550	TBCK	Q8TEA7	893 aa		11.94	□□□□□ -0.5
HMGN1-215	ENST00000485550	MARVELD3	Q96A59	401 aa		11.94	□□□□□ -0.5
HMGN1-215	ENST00000485550	LENG9	Q96B70	501 aa		11.94	□□□□□ -0.5
HMGN1-215	ENST00000485550	AIFM3	Q96NN9	605 aa		11.94	□□□□□ -0.5
HMGN1-215	ENST00000485550	DISC1	Q9NRI5	854 aa		11.94	□□□□□ -0.5
HMGN1-215	ENST00000485550	NR2E1	Q9Y466	385 aa		11.94	□□□□□ -0.5
HMGN1-215	ENST00000485550	CEP250	Q9BV73	2442 aa		11.94	□□□□□ -0.5
HMGN1-215	ENST00000485550	COL1A2	P08123	1366 aa		11.93	□□□□□ -0.5
HMGN1-215	ENST00000485550	MED19	A0JLT2	244 aa	Predicted RBP	11.93	□□□□□ -0.5
HMGN1-215	ENST00000485550	WDR64	B1ANS9	1081 aa		11.93	□□□□□ -0.5
HMGN1-215	ENST00000485550	GPR182	O15218	404 aa		11.93	□□□□□ -0.5
HMGN1-215	ENST00000485550	ZNF862	O60290	1169 aa		11.93	□□□□□ -0.5
HMGN1-215	ENST00000485550	GAS7	O60861	476 aa		11.93	□□□□□ -0.5
HMGN1-215	ENST00000485550	GPR32	O75388	356 aa		11.93	□□□□□ -0.5
HMGN1-215	ENST00000485550	ASGR2	P07307	311 aa		11.93	□□□□□ -0.5
HMGN1-215	ENST00000485550	SARS	P49591	514 aa	Known RBP	11.93	□□□□□ -0.5
HMGN1-215	ENST00000485550	CRYBB1	P53674	252 aa	Predicted RBP	11.93	□□□□□ -0.5
HMGN1-215	ENST00000485550	UGCG	Q16739	394 aa		11.93	□□□□□ -0.5
HMGN1-215	ENST00000485550	EFCAB12	Q6NXP0	572 aa		11.93	□□□□□ -0.5
HMGN1-215	ENST00000485550	TMEM184A	Q6ZMB5	413 aa		11.93	□□□□□ -0.5
HMGN1-215	ENST00000485550	FAM228A	Q86W67	206 aa		11.93	□□□□□ -0.5
HMGN1-215	ENST00000485550	UBALD2	Q8IYN6	164 aa		11.93	□□□□□ -0.5
HMGN1-215	ENST00000485550	COLGALT1	Q8NBJ5	622 aa		11.93	□□□□□ -0.5
HMGN1-215	ENST00000485550	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	11.93	□□□□□ -0.5
HMGN1-215	ENST00000485550	UNC45A	Q9H3U1	944 aa		11.93	□□□□□ -0.5
HMGN1-215	ENST00000485550	MFSD1	Q9H3U5	465 aa		11.93	□□□□□ -0.5
HMGN1-215	ENST00000485550	POMK	Q9H5K3	350 aa		11.93	□□□□□ -0.5
HMGN1-215	ENST00000485550	AAAS	Q9NRG9	546 aa		11.93	□□□□□ -0.5
HMGN1-215	ENST00000485550	NRBP2	Q9NSY0	501 aa		11.93	□□□□□ -0.5
HMGN1-215	ENST00000485550	PDRG1	Q9NUG6	133 aa		11.93	□□□□□ -0.5
HMGN1-215	ENST00000485550	PCDHA4	Q9UN74	947 aa		11.93	□□□□□ -0.5
HMGN1-215	ENST00000485550	AKT3	Q9Y243	479 aa		11.93	□□□□□ -0.5
HMGN1-215	ENST00000485550	SPTBN2	O15020	2390 aa		11.93	□□□□□ -0.5
HMGN1-215	ENST00000485550	FSD2	A1L4K1	749 aa		11.92	□□□□□ -0.5
HMGN1-215	ENST00000485550	HIDE1	A8MVS5	230 aa		11.92	□□□□□ -0.5
HMGN1-215	ENST00000485550	TDP2	O95551	362 aa		11.92	□□□□□ -0.5
HMGN1-215	ENST00000485550	OAT	P04181	439 aa		11.92	□□□□□ -0.5
HMGN1-215	ENST00000485550	WEE2	P0C1S8	567 aa		11.92	□□□□□ -0.5
HMGN1-215	ENST00000485550	FGFR1	P11362	822 aa		11.92	□□□□□ -0.5
HMGN1-215	ENST00000485550	USP11	P51784	963 aa		11.92	□□□□□ -0.5
HMGN1-215	ENST00000485550	NLRP11	P59045	1033 aa	Known RBP	11.92	□□□□□ -0.5
HMGN1-215	ENST00000485550	LRCH2	Q5VUJ6	765 aa		11.92	□□□□□ -0.5
HMGN1-215	ENST00000485550	SLC24A5	Q71RS6	500 aa		11.92	□□□□□ -0.5
HMGN1-215	ENST00000485550	BLID	Q8IZY5	108 aa		11.92	□□□□□ -0.5
HMGN1-215	ENST00000485550	ZNF274	Q96GC6	653 aa	Predicted RBP	11.92	□□□□□ -0.5
HMGN1-215	ENST00000485550	TCF25	Q9BQ70	676 aa		11.92	□□□□□ -0.5
HMGN1-215	ENST00000485550	SH2D3A	Q9BRG2	576 aa		11.92	□□□□□ -0.5
HMGN1-215	ENST00000485550	TEKT3	Q9BXF9	490 aa		11.92	□□□□□ -0.5
HMGN1-215	ENST00000485550	ENTPD7	Q9NQZ7	604 aa		11.92	□□□□□ -0.5
HMGN1-215	ENST00000485550	SH3GLB2	Q9NR46	395 aa		11.92	□□□□□ -0.5
HMGN1-215	ENST00000485550	RGS18	Q9NS28	235 aa		11.92	□□□□□ -0.5
HMGN1-215	ENST00000485550	TYW1	Q9NV66	732 aa	Known RBP	11.92	□□□□□ -0.5
HMGN1-215	ENST00000485550	KCNJ14	Q9UNX9	436 aa		11.92	□□□□□ -0.5
HMGN1-215	ENST00000485550	CEP131	Q9UPN4	1083 aa		11.92	□□□□□ -0.5
HMGN1-215	ENST00000485550	CACNA1I	Q9P0X4	2223 aa		11.91	□□□□□ -0.5
HMGN1-215	ENST00000485550	NCOR2	Q9Y618	2525 aa		11.91	□□□□□ -0.5
HMGN1-215	ENST00000485550	TMEM150B	A6NC51	233 aa		11.91	□□□□□ -0.5
HMGN1-215	ENST00000485550		C9IYK1	514 aa		11.91	□□□□□ -0.5
HMGN1-215	ENST00000485550	MAGEB2	O15479	319 aa		11.91	□□□□□ -0.5
HMGN1-215	ENST00000485550	DEXI	O95424	95 aa		11.91	□□□□□ -0.5
HMGN1-215	ENST00000485550	FGFR4	P22455	802 aa		11.91	□□□□□ -0.5
HMGN1-215	ENST00000485550	PRKCE	Q02156	737 aa		11.91	□□□□□ -0.5
HMGN1-215	ENST00000485550	ODR4	Q5SWX8	454 aa		11.91	□□□□□ -0.5
HMGN1-215	ENST00000485550	PDE12	Q6L8Q7	609 aa	Known RBP	11.91	□□□□□ -0.5
HMGN1-215	ENST00000485550	CPLX2	Q6PUV4	134 aa	Known RBP	11.91	□□□□□ -0.5
HMGN1-215	ENST00000485550	MIER3	Q7Z3K6	550 aa		11.91	□□□□□ -0.5
HMGN1-215	ENST00000485550	FLCN	Q8NFG4	579 aa		11.91	□□□□□ -0.5
HMGN1-215	ENST00000485550	MRPS27	Q92552	414 aa	Known RBP	11.91	□□□□□ -0.5

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