RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 CCDC169A6NNP5 214 aa19.41■□□□□ 0.7
CHMP3-207ENST00000485465 DCDC2CA8MYV0 355 aa19.41■□□□□ 0.7
CHMP3-207ENST00000485465 SRGAP2CP0DJJ0 459 aa19.41■□□□□ 0.7
CHMP3-207ENST00000485465 NAMPTP43490 491 aa19.41■□□□□ 0.7
CHMP3-207ENST00000485465 CDC42EP1Q00587 391 aa19.41■□□□□ 0.7
CHMP3-207ENST00000485465 TLE2Q04725 743 aa19.41■□□□□ 0.7
CHMP3-207ENST00000485465 CAPSQ13938 189 aa19.41■□□□□ 0.7
CHMP3-207ENST00000485465 TFDP1Q14186 410 aa19.41■□□□□ 0.7
CHMP3-207ENST00000485465 TRIM71Q2Q1W2 868 aaKnown RBP19.41■□□□□ 0.7
CHMP3-207ENST00000485465 FAM26FQ5R3K3 315 aa19.41■□□□□ 0.7
CHMP3-207ENST00000485465 FAM178BQ8IXR5 827 aa19.41■□□□□ 0.7
CHMP3-207ENST00000485465 HPS3Q969F9 1004 aa19.41■□□□□ 0.7
CHMP3-207ENST00000485465 FIZ1Q96SL8 496 aa19.41■□□□□ 0.7
CHMP3-207ENST00000485465 NTPCRQ9BSD7 190 aaKnown RBP19.41■□□□□ 0.7
CHMP3-207ENST00000485465 OLFML3Q9NRN5 406 aa19.41■□□□□ 0.7
CHMP3-207ENST00000485465 TBC1D7Q9P0N9 293 aa19.41■□□□□ 0.7
CHMP3-207ENST00000485465 KIAA0100Q14667 2235 aaKnown RBP19.4■□□□□ 0.7
CHMP3-207ENST00000485465 BIN1O00499 593 aa19.4■□□□□ 0.7
CHMP3-207ENST00000485465 GPR32O75388 356 aa19.4■□□□□ 0.7
CHMP3-207ENST00000485465 MAPTP10636 758 aaKnown RBP19.4■□□□□ 0.7
CHMP3-207ENST00000485465 GPC3P51654 580 aa19.4■□□□□ 0.7
CHMP3-207ENST00000485465 SMTNP53814 917 aa19.4■□□□□ 0.7
CHMP3-207ENST00000485465 NLRP11P59045 1033 aaKnown RBP19.4■□□□□ 0.7
CHMP3-207ENST00000485465 POU5F1BQ06416 359 aa19.4■□□□□ 0.7
CHMP3-207ENST00000485465 TMEM62Q0P6H9 643 aa19.4■□□□□ 0.7
CHMP3-207ENST00000485465 MORC3Q14149 939 aa19.4■□□□□ 0.7
CHMP3-207ENST00000485465 ISM2Q6H9L7 571 aa19.4■□□□□ 0.7
CHMP3-207ENST00000485465 ZNF710Q8N1W2 664 aa19.4■□□□□ 0.7
CHMP3-207ENST00000485465 RNF149Q8NC42 400 aa19.4■□□□□ 0.7
CHMP3-207ENST00000485465 NLRP4Q96MN2 994 aa19.4■□□□□ 0.7
CHMP3-207ENST00000485465 PPP1R16BQ96T49 567 aa19.4■□□□□ 0.7
CHMP3-207ENST00000485465 ADAMTS10Q9H324 1103 aa19.4■□□□□ 0.7
CHMP3-207ENST00000485465 MRPL44Q9H9J2 332 aaKnown RBP19.4■□□□□ 0.7
CHMP3-207ENST00000485465 KMT5AQ9NQR1 393 aa19.4■□□□□ 0.7
CHMP3-207ENST00000485465 ATP11BQ9Y2G3 1177 aa19.4■□□□□ 0.7
CHMP3-207ENST00000485465 TRIP12Q14669 1992 aaPredicted RBP19.4■□□□□ 0.7
CHMP3-207ENST00000485465 LRRIQ4A6NIV6 560 aa19.39■□□□□ 0.69
CHMP3-207ENST00000485465 SLC16A4O15374 487 aa19.39■□□□□ 0.69
CHMP3-207ENST00000485465 CAND2O75155 1236 aa19.39■□□□□ 0.69
CHMP3-207ENST00000485465 NMT1P30419 496 aaKnown RBP19.39■□□□□ 0.69
CHMP3-207ENST00000485465 THPOP40225 353 aa19.39■□□□□ 0.69
CHMP3-207ENST00000485465 NCKAP1LP55160 1127 aa19.39■□□□□ 0.69
CHMP3-207ENST00000485465 MRPS6P82932 125 aaKnown RBP19.39■□□□□ 0.69
CHMP3-207ENST00000485465 FAAP100Q0VG06 881 aa19.39■□□□□ 0.69
CHMP3-207ENST00000485465 STK4Q13043 487 aa19.39■□□□□ 0.69
CHMP3-207ENST00000485465 KIZQ2M2Z5 673 aa19.39■□□□□ 0.69
CHMP3-207ENST00000485465 ZSCAN23Q3MJ62 389 aa19.39■□□□□ 0.69
CHMP3-207ENST00000485465 ZNF658Q5TYW1 1059 aaPredicted RBP19.39■□□□□ 0.69
CHMP3-207ENST00000485465 ZNF720Q7Z2F6 126 aa19.39■□□□□ 0.69
CHMP3-207ENST00000485465 ZNF410Q86VK4 478 aa19.39■□□□□ 0.69
CHMP3-207ENST00000485465 TRIML1Q8N9V2 468 aa19.39■□□□□ 0.69
CHMP3-207ENST00000485465 SLC17A8Q8NDX2 589 aa19.39■□□□□ 0.69
CHMP3-207ENST00000485465 DEPTORQ8TB45 409 aa19.39■□□□□ 0.69
CHMP3-207ENST00000485465 ZNF668Q96K58 619 aaPredicted RBP19.39■□□□□ 0.69
CHMP3-207ENST00000485465 KIFC3Q9BVG8 833 aa19.39■□□□□ 0.69
CHMP3-207ENST00000485465 FGFBP2Q9BYJ0 223 aa19.39■□□□□ 0.69
CHMP3-207ENST00000485465 GTPBP4Q9BZE4 634 aaKnown RBP19.39■□□□□ 0.69
CHMP3-207ENST00000485465 SLC39A2Q9NP94 309 aa19.39■□□□□ 0.69
CHMP3-207ENST00000485465 A0A087WZ62 844 aa19.38■□□□□ 0.69
CHMP3-207ENST00000485465 PTENP60484 403 aa19.38■□□□□ 0.69
CHMP3-207ENST00000485465 CDCA2Q69YH5 1023 aaPredicted RBP19.38■□□□□ 0.69
CHMP3-207ENST00000485465 SASS6Q6UVJ0 657 aa19.38■□□□□ 0.69
CHMP3-207ENST00000485465 ADGRA3Q8IWK6 1321 aa19.38■□□□□ 0.69
CHMP3-207ENST00000485465 CCDC155Q8N6L0 562 aa19.38■□□□□ 0.69
CHMP3-207ENST00000485465 KIAA0895Q8NCT3 520 aa19.38■□□□□ 0.69
CHMP3-207ENST00000485465 TMEM161BQ8NDZ6 487 aa19.38■□□□□ 0.69
CHMP3-207ENST00000485465 CAGE1Q8TC20 777 aa19.38■□□□□ 0.69
CHMP3-207ENST00000485465 NLRP7Q8WX94 980 aa19.38■□□□□ 0.69
CHMP3-207ENST00000485465 EVPLQ92817 2033 aa19.38■□□□□ 0.69
CHMP3-207ENST00000485465 FDXACB1Q9BRP7 624 aaPredicted RBP19.38■□□□□ 0.69
CHMP3-207ENST00000485465 NFKBIZQ9BYH8 718 aa19.38■□□□□ 0.69
CHMP3-207ENST00000485465 CELF4Q9BZC1 486 aaKnown RBP19.38■□□□□ 0.69
CHMP3-207ENST00000485465 ST6GALNAC4Q9H4F1 302 aa19.38■□□□□ 0.69
CHMP3-207ENST00000485465 CDHR5Q9HBB8 845 aa19.38■□□□□ 0.69
CHMP3-207ENST00000485465 ARHGAP28Q9P2N2 729 aa19.38■□□□□ 0.69
CHMP3-207ENST00000485465 TRPV2Q9Y5S1 764 aa19.38■□□□□ 0.69
CHMP3-207ENST00000485465 CDY2AQ9Y6F7 541 aa19.38■□□□□ 0.69
CHMP3-207ENST00000485465 SYCE3A1L190 88 aa19.37■□□□□ 0.69
CHMP3-207ENST00000485465 H0YCG3 227 aa19.37■□□□□ 0.69
CHMP3-207ENST00000485465 K7ENM7 598 aa19.37■□□□□ 0.69
CHMP3-207ENST00000485465 M0QZ92 97 aa19.37■□□□□ 0.69
CHMP3-207ENST00000485465 GCNT3O95395 438 aa19.37■□□□□ 0.69
CHMP3-207ENST00000485465 MYBP10242 640 aa19.37■□□□□ 0.69
CHMP3-207ENST00000485465 CKBP12277 381 aa19.37■□□□□ 0.69
CHMP3-207ENST00000485465 BMP6P22004 513 aa19.37■□□□□ 0.69
CHMP3-207ENST00000485465 PHKA2P46019 1235 aa19.37■□□□□ 0.69
CHMP3-207ENST00000485465 CASP5P51878 434 aa19.37■□□□□ 0.69
CHMP3-207ENST00000485465 CRYBB1P53674 252 aaPredicted RBP19.37■□□□□ 0.69
CHMP3-207ENST00000485465 RBL2Q08999 1139 aa19.37■□□□□ 0.69
CHMP3-207ENST00000485465 MGAT3Q09327 533 aa19.37■□□□□ 0.69
CHMP3-207ENST00000485465 BFSP2Q13515 415 aa19.37■□□□□ 0.69
CHMP3-207ENST00000485465 FAM26DQ5JW98 314 aa19.37■□□□□ 0.69
CHMP3-207ENST00000485465 HAUS6Q7Z4H7 955 aa19.37■□□□□ 0.69
CHMP3-207ENST00000485465 IFNLR1Q8IU57 520 aaPredicted RBP19.37■□□□□ 0.69
CHMP3-207ENST00000485465 ZBTB8OSQ8IWT0 167 aa19.37■□□□□ 0.69
CHMP3-207ENST00000485465 GLIS3Q8NEA6 775 aa19.37■□□□□ 0.69
CHMP3-207ENST00000485465 SCLT1Q96NL6 688 aa19.37■□□□□ 0.69
CHMP3-207ENST00000485465 STRA6Q9BX79 667 aa19.37■□□□□ 0.69
CHMP3-207ENST00000485465 GZF1Q9H116 711 aaPredicted RBP19.37■□□□□ 0.69
CHMP3-207ENST00000485465 C2orf40Q9H1Z8 148 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms