RNA–Protein interactions for RNA: ENST00000485441.5

SRRM1-213, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-213ENST00000485441 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.69□□□□□ -1.34
SRRM1-213ENST00000485441 USP18Q9UMW8 372 aa6.69□□□□□ -1.34
SRRM1-213ENST00000485441 IPPQ9Y573 584 aa6.69□□□□□ -1.34
SRRM1-213ENST00000485441 N4BP3O15049 544 aa6.68□□□□□ -1.34
SRRM1-213ENST00000485441 ERC2O15083 957 aa6.68□□□□□ -1.34
SRRM1-213ENST00000485441 AP1G1O43747 822 aa6.68□□□□□ -1.34
SRRM1-213ENST00000485441 KNG1P01042 644 aa6.68□□□□□ -1.34
SRRM1-213ENST00000485441 PDCP20941 246 aa6.68□□□□□ -1.34
SRRM1-213ENST00000485441 EPHB3P54753 998 aa6.68□□□□□ -1.34
SRRM1-213ENST00000485441 PPARAQ07869 468 aa6.68□□□□□ -1.34
SRRM1-213ENST00000485441 GRM3Q14832 879 aa6.68□□□□□ -1.34
SRRM1-213ENST00000485441 PRR31Q5SQ13 230 aa6.68□□□□□ -1.34
SRRM1-213ENST00000485441 TMEM200BQ69YZ2 307 aa6.68□□□□□ -1.34
SRRM1-213ENST00000485441 LILRA6Q6PI73 481 aa6.68□□□□□ -1.34
SRRM1-213ENST00000485441 MPZL3Q6UWV2 235 aa6.68□□□□□ -1.34
SRRM1-213ENST00000485441 DPP8Q6V1X1 898 aaPredicted RBP6.68□□□□□ -1.34
SRRM1-213ENST00000485441 PPM1NQ8N819 430 aa6.68□□□□□ -1.34
SRRM1-213ENST00000485441 KYQ8NBH2 561 aa6.68□□□□□ -1.34
SRRM1-213ENST00000485441 LRGUKQ96M69 825 aa6.68□□□□□ -1.34
SRRM1-213ENST00000485441 DIRC2Q96SL1 478 aa6.68□□□□□ -1.34
SRRM1-213ENST00000485441 NOL10Q9BSC4 688 aaKnown RBP6.68□□□□□ -1.34
SRRM1-213ENST00000485441 SGPP1Q9BX95 441 aa6.68□□□□□ -1.34
SRRM1-213ENST00000485441 PCGF6Q9BYE7 350 aa6.68□□□□□ -1.34
SRRM1-213ENST00000485441 EPB41L4BQ9H329 900 aa6.68□□□□□ -1.34
SRRM1-213ENST00000485441 NSUN3Q9H649 340 aaKnown RBP6.68□□□□□ -1.34
SRRM1-213ENST00000485441 FAM53CQ9NYF3 392 aa6.68□□□□□ -1.34
SRRM1-213ENST00000485441 DDX20Q9UHI6 824 aaKnown RBP6.68□□□□□ -1.34
SRRM1-213ENST00000485441 LIMCH1Q9UPQ0 1083 aa6.68□□□□□ -1.34
SRRM1-213ENST00000485441 CHGBP05060 677 aa6.67□□□□□ -1.34
SRRM1-213ENST00000485441 HSPA6P17066 643 aa6.67□□□□□ -1.34
SRRM1-213ENST00000485441 PFKLP17858 780 aa6.67□□□□□ -1.34
SRRM1-213ENST00000485441 KIF23Q02241 960 aaPredicted RBP6.67□□□□□ -1.34
SRRM1-213ENST00000485441 PPP3CAQ08209 521 aa6.67□□□□□ -1.34
SRRM1-213ENST00000485441 MALLQ13021 153 aa6.67□□□□□ -1.34
SRRM1-213ENST00000485441 ZNF267Q14586 743 aaPredicted RBP6.67□□□□□ -1.34
SRRM1-213ENST00000485441 IFIT1BQ5T764 474 aaKnown RBP6.67□□□□□ -1.34
SRRM1-213ENST00000485441 USP45Q70EL2 814 aa6.67□□□□□ -1.34
SRRM1-213ENST00000485441 TMEFF1Q8IYR6 380 aa6.67□□□□□ -1.34
SRRM1-213ENST00000485441 MIER2Q8N344 545 aa6.67□□□□□ -1.34
SRRM1-213ENST00000485441 OR5AN1Q8NGI8 311 aa6.67□□□□□ -1.34
SRRM1-213ENST00000485441 TIFAQ96CG3 184 aa6.67□□□□□ -1.34
SRRM1-213ENST00000485441 ACE2Q9BYF1 805 aaPredicted RBP6.67□□□□□ -1.34
SRRM1-213ENST00000485441 NMRK2Q9NPI5 230 aa6.67□□□□□ -1.34
SRRM1-213ENST00000485441 DCP1AQ9NPI6 582 aaPredicted RBP6.67□□□□□ -1.34
SRRM1-213ENST00000485441 PRDM11Q9NQV5 511 aa6.67□□□□□ -1.34
SRRM1-213ENST00000485441 CHST12Q9NRB3 414 aa6.67□□□□□ -1.34
SRRM1-213ENST00000485441 PTPN22Q9Y2R2 807 aa6.67□□□□□ -1.34
SRRM1-213ENST00000485441 MAFGO15525 162 aa6.66□□□□□ -1.34
SRRM1-213ENST00000485441 HTRA2O43464 458 aaPredicted RBP6.66□□□□□ -1.34
SRRM1-213ENST00000485441 SEMA7AO75326 666 aa6.66□□□□□ -1.34
SRRM1-213ENST00000485441 KRT18P05783 430 aaKnown RBP6.66□□□□□ -1.34
SRRM1-213ENST00000485441 MCAMP43121 646 aa6.66□□□□□ -1.34
SRRM1-213ENST00000485441 MLLT6P55198 1093 aaPredicted RBP6.66□□□□□ -1.34
SRRM1-213ENST00000485441 DGKDQ16760 1214 aa6.66□□□□□ -1.34
SRRM1-213ENST00000485441 GRAMD4Q6IC98 578 aa6.66□□□□□ -1.34
SRRM1-213ENST00000485441 BTNL9Q6UXG8 535 aa6.66□□□□□ -1.34
SRRM1-213ENST00000485441 CHST15Q7LFX5 561 aaPredicted RBP6.66□□□□□ -1.34
SRRM1-213ENST00000485441 CATIPQ7Z7H3 387 aa6.66□□□□□ -1.34
SRRM1-213ENST00000485441 CCAR1Q8IX12 1150 aaKnown RBP6.66□□□□□ -1.34
SRRM1-213ENST00000485441 TTLL6Q8N841 843 aa6.66□□□□□ -1.34
SRRM1-213ENST00000485441 NKD2Q969F2 451 aaPredicted RBP6.66□□□□□ -1.34
SRRM1-213ENST00000485441 OSBPL6Q9BZF3 934 aa6.66□□□□□ -1.34
SRRM1-213ENST00000485441 GREM2Q9H772 168 aa6.66□□□□□ -1.34
SRRM1-213ENST00000485441 SPATA6Q9NWH7 488 aaPredicted RBP6.66□□□□□ -1.34
SRRM1-213ENST00000485441 RCAN3Q9UKA8 241 aa6.66□□□□□ -1.34
SRRM1-213ENST00000485441 DNM3Q9UQ16 869 aa6.66□□□□□ -1.34
SRRM1-213ENST00000485441 A0A1W2PR48 441 aa6.65□□□□□ -1.34
SRRM1-213ENST00000485441 OFD1O75665 1012 aa6.65□□□□□ -1.34
SRRM1-213ENST00000485441 PLA2G1BP04054 148 aaKnown RBP6.65□□□□□ -1.34
SRRM1-213ENST00000485441 TRIM27P14373 513 aa6.65□□□□□ -1.34
SRRM1-213ENST00000485441 CCT2P78371 535 aaKnown RBP6.65□□□□□ -1.34
SRRM1-213ENST00000485441 UBE4AQ14139 1066 aa6.65□□□□□ -1.34
SRRM1-213ENST00000485441 ARHGAP29Q52LW3 1261 aa6.65□□□□□ -1.34
SRRM1-213ENST00000485441 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.65□□□□□ -1.34
SRRM1-213ENST00000485441 DIS3LQ8TF46 1054 aaKnown RBP6.65□□□□□ -1.34
SRRM1-213ENST00000485441 NRG4Q8WWG1 115 aa6.65□□□□□ -1.34
SRRM1-213ENST00000485441 HIST1H2AHQ96KK5 128 aa6.65□□□□□ -1.34
SRRM1-213ENST00000485441 ZSWIM3Q96MP5 696 aa6.65□□□□□ -1.34
SRRM1-213ENST00000485441 CLIC6Q96NY7 704 aa6.65□□□□□ -1.34
SRRM1-213ENST00000485441 HIST1H2AJQ99878 128 aa6.65□□□□□ -1.34
SRRM1-213ENST00000485441 SARGQ9BW04 601 aa6.65□□□□□ -1.34
SRRM1-213ENST00000485441 EPB41L4AQ9HCS5 686 aaPredicted RBP6.65□□□□□ -1.34
SRRM1-213ENST00000485441 DDX21Q9NR30 783 aaKnown RBP eCLIP6.65□□□□□ -1.34
SRRM1-213ENST00000485441 MAGEL2Q9UJ55 1249 aa6.65□□□□□ -1.34
SRRM1-213ENST00000485441 A6NNZ2 444 aa6.64□□□□□ -1.35
SRRM1-213ENST00000485441 CTNND1O60716 968 aaKnown RBP6.64□□□□□ -1.35
SRRM1-213ENST00000485441 MYL1P05976 194 aa6.64□□□□□ -1.35
SRRM1-213ENST00000485441 USP14P54578 494 aa6.64□□□□□ -1.35
SRRM1-213ENST00000485441 PURAQ00577 322 aaKnown RBP6.64□□□□□ -1.35
SRRM1-213ENST00000485441 CD69Q07108 199 aa6.64□□□□□ -1.35
SRRM1-213ENST00000485441 DLX2Q07687 328 aaPredicted RBP6.64□□□□□ -1.35
SRRM1-213ENST00000485441 EIF4HQ15056 248 aaKnown RBP6.64□□□□□ -1.35
SRRM1-213ENST00000485441 TRIM68Q6AZZ1 485 aa6.64□□□□□ -1.35
SRRM1-213ENST00000485441 FAM43AQ8N2R8 423 aa6.64□□□□□ -1.35
SRRM1-213ENST00000485441 OR2I1PQ8NGU4 316 aa6.64□□□□□ -1.35
SRRM1-213ENST00000485441 ZCCHC14Q8WYQ9 949 aaKnown RBP6.64□□□□□ -1.35
SRRM1-213ENST00000485441 MVB12AQ96EY5 273 aa6.64□□□□□ -1.35
SRRM1-213ENST00000485441 WRNIP1Q96S55 665 aa6.64□□□□□ -1.35
SRRM1-213ENST00000485441 ACO2Q99798 780 aaKnown RBP6.64□□□□□ -1.35
SRRM1-213ENST00000485441 ZNF700Q9H0M5 742 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms