RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 EML1O00423 815 aa21.62■■□□□ 1.05
COL27A1-205ENST00000485397 SLC37A4O43826 429 aa21.62■■□□□ 1.05
COL27A1-205ENST00000485397 DTNBO60941 627 aa21.62■■□□□ 1.05
COL27A1-205ENST00000485397 EOMESO95936 686 aa21.62■■□□□ 1.05
COL27A1-205ENST00000485397 TECP42680 631 aa21.62■■□□□ 1.05
COL27A1-205ENST00000485397 KRT17Q04695 432 aa21.62■■□□□ 1.05
COL27A1-205ENST00000485397 CBX2Q14781 532 aaPredicted RBP21.62■■□□□ 1.05
COL27A1-205ENST00000485397 GALNT17Q6IS24 598 aa21.62■■□□□ 1.05
COL27A1-205ENST00000485397 LLGL2Q6P1M3 1020 aa21.62■■□□□ 1.05
COL27A1-205ENST00000485397 TMEM184AQ6ZMB5 413 aa21.62■■□□□ 1.05
COL27A1-205ENST00000485397 TMC7Q7Z402 723 aa21.62■■□□□ 1.05
COL27A1-205ENST00000485397 SLC39A11Q8N1S5 342 aa21.62■■□□□ 1.05
COL27A1-205ENST00000485397 APOL5Q9BWW9 433 aa21.62■■□□□ 1.05
COL27A1-205ENST00000485397 NGRNQ9NPE2 291 aaKnown RBP21.62■■□□□ 1.05
COL27A1-205ENST00000485397 DACT1Q9NYF0 836 aa21.62■■□□□ 1.05
COL27A1-205ENST00000485397 SUCLA2Q9P2R7 463 aaPredicted RBP21.62■■□□□ 1.05
COL27A1-205ENST00000485397 FSD2A1L4K1 749 aa21.61■■□□□ 1.05
COL27A1-205ENST00000485397 PPM1AP35813 382 aa21.61■■□□□ 1.05
COL27A1-205ENST00000485397 LETM2Q2VYF4 491 aa21.61■■□□□ 1.05
COL27A1-205ENST00000485397 PLA2G4FQ68DD2 849 aa21.61■■□□□ 1.05
COL27A1-205ENST00000485397 ANKRD54Q6NXT1 300 aa21.61■■□□□ 1.05
COL27A1-205ENST00000485397 ANO5Q75V66 913 aa21.61■■□□□ 1.05
COL27A1-205ENST00000485397 KRT25Q7Z3Z0 450 aa21.61■■□□□ 1.05
COL27A1-205ENST00000485397 RHPN2Q8IUC4 686 aa21.61■■□□□ 1.05
COL27A1-205ENST00000485397 KSR1Q8IVT5 923 aa21.61■■□□□ 1.05
COL27A1-205ENST00000485397 S1PR5Q9H228 398 aa21.61■■□□□ 1.05
COL27A1-205ENST00000485397 TECTAO75443 2155 aa21.61■■□□□ 1.05
COL27A1-205ENST00000485397 C5orf42Q9H799 3197 aa21.6■■□□□ 1.05
COL27A1-205ENST00000485397 NT5C1B-RDH14C9J2C7 533 aa21.6■■□□□ 1.05
COL27A1-205ENST00000485397 MAFO75444 373 aaPredicted RBP21.6■■□□□ 1.05
COL27A1-205ENST00000485397 DNM2P50570 870 aa21.6■■□□□ 1.05
COL27A1-205ENST00000485397 PSMC5P62195 406 aa21.6■■□□□ 1.05
COL27A1-205ENST00000485397 CDC42EP1Q00587 391 aa21.6■■□□□ 1.05
COL27A1-205ENST00000485397 SCRN1Q12765 414 aa21.6■■□□□ 1.05
COL27A1-205ENST00000485397 LONRF3Q496Y0 759 aa21.6■■□□□ 1.05
COL27A1-205ENST00000485397 SYCE2Q6PIF2 218 aa21.6■■□□□ 1.05
COL27A1-205ENST00000485397 LPPQ93052 612 aa21.6■■□□□ 1.05
COL27A1-205ENST00000485397 FBXL18Q96ME1 805 aa21.6■■□□□ 1.05
COL27A1-205ENST00000485397 CHST12Q9NRB3 414 aa21.6■■□□□ 1.05
COL27A1-205ENST00000485397 SRGAP2BP0DMP2 458 aa21.59■■□□□ 1.05
COL27A1-205ENST00000485397 PHKA2P46019 1235 aa21.59■■□□□ 1.05
COL27A1-205ENST00000485397 BCAR1P56945 870 aa21.59■■□□□ 1.05
COL27A1-205ENST00000485397 TWF2Q6IBS0 349 aaKnown RBP21.59■■□□□ 1.05
COL27A1-205ENST00000485397 FAM177A1Q8N128 213 aaPredicted RBP21.59■■□□□ 1.05
COL27A1-205ENST00000485397 MFSD14AQ96MC6 490 aa21.59■■□□□ 1.05
COL27A1-205ENST00000485397 PHF20Q9BVI0 1012 aa21.59■■□□□ 1.05
COL27A1-205ENST00000485397 GJB4Q9NTQ9 266 aa21.59■■□□□ 1.05
COL27A1-205ENST00000485397 VAV3Q9UKW4 847 aa21.59■■□□□ 1.05
COL27A1-205ENST00000485397 SFPQP23246 707 aaKnown RBP eCLIP21.58■■□□□ 1.05
COL27A1-205ENST00000485397 NPEPPSP55786 919 aa21.58■■□□□ 1.05
COL27A1-205ENST00000485397 ZXDAP98168 799 aa21.58■■□□□ 1.05
COL27A1-205ENST00000485397 TRIM67Q6ZTA4 783 aa21.58■■□□□ 1.05
COL27A1-205ENST00000485397 ALYREFQ86V81 257 aaKnown RBP21.58■■□□□ 1.05
COL27A1-205ENST00000485397 ZNF410Q86VK4 478 aa21.58■■□□□ 1.05
COL27A1-205ENST00000485397 ZNF579Q8NAF0 562 aaKnown RBP21.58■■□□□ 1.05
COL27A1-205ENST00000485397 NLRP4Q96MN2 994 aa21.58■■□□□ 1.05
COL27A1-205ENST00000485397 MRPL9Q9BYD2 267 aaKnown RBP21.58■■□□□ 1.05
COL27A1-205ENST00000485397 KCNMB3Q9NPA1 279 aa21.58■■□□□ 1.05
COL27A1-205ENST00000485397 PIN4Q9Y237 131 aaKnown RBP21.58■■□□□ 1.05
COL27A1-205ENST00000485397 CCDC194A0A1B0GVG4 234 aa21.57■■□□□ 1.04
COL27A1-205ENST00000485397 TMEM221A6NGB7 291 aa21.57■■□□□ 1.04
COL27A1-205ENST00000485397 C2orf71A6NGG8 1288 aa21.57■■□□□ 1.04
COL27A1-205ENST00000485397 MEIS3P2A8K0S8 358 aa21.57■■□□□ 1.04
COL27A1-205ENST00000485397 M0R296 226 aa21.57■■□□□ 1.04
COL27A1-205ENST00000485397 PPP2R5CQ13362 524 aa21.57■■□□□ 1.04
COL27A1-205ENST00000485397 SMC1AQ14683 1233 aaKnown RBP21.57■■□□□ 1.04
COL27A1-205ENST00000485397 CATSPER4Q7RTX7 472 aa21.57■■□□□ 1.04
COL27A1-205ENST00000485397 NEK8Q86SG6 692 aa21.57■■□□□ 1.04
COL27A1-205ENST00000485397 TMEM173Q86WV6 379 aaPredicted RBP21.57■■□□□ 1.04
COL27A1-205ENST00000485397 MRPL43Q8N983 215 aaKnown RBP21.57■■□□□ 1.04
COL27A1-205ENST00000485397 OXER1Q8TDS5 423 aa21.57■■□□□ 1.04
COL27A1-205ENST00000485397 TRAIPQ9BWF2 469 aa21.57■■□□□ 1.04
COL27A1-205ENST00000485397 INO80BQ9C086 356 aaPredicted RBP21.57■■□□□ 1.04
COL27A1-205ENST00000485397 SLKQ9H2G2 1235 aaPredicted RBP21.57■■□□□ 1.04
COL27A1-205ENST00000485397 CYP26B1Q9NR63 512 aa21.57■■□□□ 1.04
COL27A1-205ENST00000485397 WRAP73Q9P2S5 460 aaPredicted RBP21.57■■□□□ 1.04
COL27A1-205ENST00000485397 CDH22Q9UJ99 828 aa21.57■■□□□ 1.04
COL27A1-205ENST00000485397 CLASP2O75122 1294 aaKnown RBP21.56■■□□□ 1.04
COL27A1-205ENST00000485397 CA8P35219 290 aa21.56■■□□□ 1.04
COL27A1-205ENST00000485397 QARSP47897 775 aaKnown RBP21.56■■□□□ 1.04
COL27A1-205ENST00000485397 ALDH7A1P49419 539 aaKnown RBP21.56■■□□□ 1.04
COL27A1-205ENST00000485397 PPP4R3AQ6IN85 833 aa21.56■■□□□ 1.04
COL27A1-205ENST00000485397 FAM20AQ96MK3 541 aa21.56■■□□□ 1.04
COL27A1-205ENST00000485397 JPH2Q9BR39 696 aaPredicted RBP21.56■■□□□ 1.04
COL27A1-205ENST00000485397 KCNH6Q9H252 994 aa21.56■■□□□ 1.04
COL27A1-205ENST00000485397 FAM105AQ9NUU6 356 aa21.56■■□□□ 1.04
COL27A1-205ENST00000485397 TPCN1Q9ULQ1 816 aa21.56■■□□□ 1.04
COL27A1-205ENST00000485397 INPP5FQ9Y2H2 1132 aa21.56■■□□□ 1.04
COL27A1-205ENST00000485397 HCFC2Q9Y5Z7 792 aa21.56■■□□□ 1.04
COL27A1-205ENST00000485397 CCNT1O60563 726 aaKnown RBP21.55■■□□□ 1.04
COL27A1-205ENST00000485397 ZC3H11AO75152 810 aaKnown RBP eCLIP21.55■■□□□ 1.04
COL27A1-205ENST00000485397 CDKL5O76039 1030 aa21.55■■□□□ 1.04
COL27A1-205ENST00000485397 CXCL14O95715 111 aa21.55■■□□□ 1.04
COL27A1-205ENST00000485397 HOXB8P17481 243 aaPredicted RBP21.55■■□□□ 1.04
COL27A1-205ENST00000485397 SP100P23497 879 aaPredicted RBP21.55■■□□□ 1.04
COL27A1-205ENST00000485397 NHLH1Q02575 133 aa21.55■■□□□ 1.04
COL27A1-205ENST00000485397 EARS2Q5JPH6 523 aaKnown RBP21.55■■□□□ 1.04
COL27A1-205ENST00000485397 PIK3AP1Q6ZUJ8 805 aa21.55■■□□□ 1.04
COL27A1-205ENST00000485397 BMP8AQ7Z5Y6 402 aa21.55■■□□□ 1.04
COL27A1-205ENST00000485397 HAS1Q92839 578 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms