RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 NOL10Q9BSC4 688 aaKnown RBP6.03□□□□□ -1.44
SMC4-215ENST00000484799 POLR3BQ9NW08 1133 aaPredicted RBP6.03□□□□□ -1.44
SMC4-215ENST00000484799 OXSMQ9NWU1 459 aa6.03□□□□□ -1.44
SMC4-215ENST00000484799 DNAI1Q9UI46 699 aa6.03□□□□□ -1.44
SMC4-215ENST00000484799 SPO11Q9Y5K1 396 aa6.03□□□□□ -1.44
SMC4-215ENST00000484799 SUV39H1O43463 412 aa6.02□□□□□ -1.45
SMC4-215ENST00000484799 KPNA6O60684 536 aa6.02□□□□□ -1.45
SMC4-215ENST00000484799 RAB11FIP3O75154 756 aa6.02□□□□□ -1.45
SMC4-215ENST00000484799 PRPF6O94906 941 aaKnown RBP6.02□□□□□ -1.45
SMC4-215ENST00000484799 FSBPO95073 299 aa6.02□□□□□ -1.45
SMC4-215ENST00000484799 JUNP05412 331 aaKnown RBP6.02□□□□□ -1.45
SMC4-215ENST00000484799 XPAP23025 273 aaPredicted RBP6.02□□□□□ -1.45
SMC4-215ENST00000484799 KPNA1P52294 538 aaPredicted RBP6.02□□□□□ -1.45
SMC4-215ENST00000484799 NPEPPSP55786 919 aa6.02□□□□□ -1.45
SMC4-215ENST00000484799 ANTXR2P58335 489 aa6.02□□□□□ -1.45
SMC4-215ENST00000484799 OCRLQ01968 901 aa6.02□□□□□ -1.45
SMC4-215ENST00000484799 TUBA3CQ13748 450 aa6.02□□□□□ -1.45
SMC4-215ENST00000484799 GAGE13Q4V321 117 aa6.02□□□□□ -1.45
SMC4-215ENST00000484799 TUBA3EQ6PEY2 450 aa6.02□□□□□ -1.45
SMC4-215ENST00000484799 KIF18BQ86Y91 864 aa6.02□□□□□ -1.45
SMC4-215ENST00000484799 Q8N1X5 172 aa6.02□□□□□ -1.45
SMC4-215ENST00000484799 MIEF2Q96C03 454 aa6.02□□□□□ -1.45
SMC4-215ENST00000484799 HIST1H2AHQ96KK5 128 aa6.02□□□□□ -1.45
SMC4-215ENST00000484799 C16orf92Q96LL3 132 aa6.02□□□□□ -1.45
SMC4-215ENST00000484799 HIST1H2AJQ99878 128 aa6.02□□□□□ -1.45
SMC4-215ENST00000484799 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.02□□□□□ -1.45
SMC4-215ENST00000484799 C2orf78A6NCI8 922 aa6.01□□□□□ -1.45
SMC4-215ENST00000484799 DUSP8Q13202 625 aa6.01□□□□□ -1.45
SMC4-215ENST00000484799 ELAVL1Q15717 326 aaKnown RBP6.01□□□□□ -1.45
SMC4-215ENST00000484799 TAF7LQ5H9L4 462 aa6.01□□□□□ -1.45
SMC4-215ENST00000484799 MFSD5Q6N075 450 aa6.01□□□□□ -1.45
SMC4-215ENST00000484799 C16orf86Q6ZW13 317 aa6.01□□□□□ -1.45
SMC4-215ENST00000484799 C11orf74Q86VG3 221 aa6.01□□□□□ -1.45
SMC4-215ENST00000484799 RTF1Q92541 710 aaKnown RBP6.01□□□□□ -1.45
SMC4-215ENST00000484799 FERMT2Q96AC1 680 aa6.01□□□□□ -1.45
SMC4-215ENST00000484799 MYL10Q9BUA6 226 aa6.01□□□□□ -1.45
SMC4-215ENST00000484799 C14orf93Q9H972 538 aaKnown RBP6.01□□□□□ -1.45
SMC4-215ENST00000484799 AGO3Q9H9G7 860 aaKnown RBP6.01□□□□□ -1.45
SMC4-215ENST00000484799 THG1LQ9NWX6 298 aaKnown RBP6.01□□□□□ -1.45
SMC4-215ENST00000484799 CD2APQ9Y5K6 639 aa6.01□□□□□ -1.45
SMC4-215ENST00000484799 TOX4O94842 621 aa6□□□□□ -1.45
SMC4-215ENST00000484799 ADH4P08319 380 aa6□□□□□ -1.45
SMC4-215ENST00000484799 C1SP09871 688 aa6□□□□□ -1.45
SMC4-215ENST00000484799 VSIG10L2P0DP72 767 aa6□□□□□ -1.45
SMC4-215ENST00000484799 MAKP20794 623 aa6□□□□□ -1.45
SMC4-215ENST00000484799 SMAD3P84022 425 aaKnown RBP6□□□□□ -1.45
SMC4-215ENST00000484799 DGCR2P98153 550 aa6□□□□□ -1.45
SMC4-215ENST00000484799 FKBP15Q5T1M5 1219 aa6□□□□□ -1.45
SMC4-215ENST00000484799 KIAA1841Q6NSI8 718 aa6□□□□□ -1.45
SMC4-215ENST00000484799 ESPNLQ6ZVH7 1005 aa6□□□□□ -1.45
SMC4-215ENST00000484799 NXPE1Q8N323 547 aa6□□□□□ -1.45
SMC4-215ENST00000484799 IL17DQ8TAD2 202 aa6□□□□□ -1.45
SMC4-215ENST00000484799 NEU4Q8WWR8 484 aaPredicted RBP6□□□□□ -1.45
SMC4-215ENST00000484799 FAM193BQ96PV7 902 aaPredicted RBP6□□□□□ -1.45
SMC4-215ENST00000484799 MTG2Q9H4K7 406 aa6□□□□□ -1.45
SMC4-215ENST00000484799 KANSL2Q9H9L4 492 aa6□□□□□ -1.45
SMC4-215ENST00000484799 IL23AQ9NPF7 189 aa6□□□□□ -1.45
SMC4-215ENST00000484799 FANCLQ9NW38 375 aa6□□□□□ -1.45
SMC4-215ENST00000484799 SH3BP1Q9Y3L3 701 aa6□□□□□ -1.45
SMC4-215ENST00000484799 PLSCR1O15162 318 aa5.99□□□□□ -1.45
SMC4-215ENST00000484799 IPO13O94829 963 aaKnown RBP5.99□□□□□ -1.45
SMC4-215ENST00000484799 SLPIP03973 132 aa5.99□□□□□ -1.45
SMC4-215ENST00000484799 GNAT2P19087 354 aa5.99□□□□□ -1.45
SMC4-215ENST00000484799 KIR2DL3P43628 341 aa5.99□□□□□ -1.45
SMC4-215ENST00000484799 MAN2A2P49641 1150 aa5.99□□□□□ -1.45
SMC4-215ENST00000484799 RRP1BQ14684 758 aaKnown RBP5.99□□□□□ -1.45
SMC4-215ENST00000484799 LRRTM3Q86VH5 581 aa5.99□□□□□ -1.45
SMC4-215ENST00000484799 BCL6BQ8N143 479 aaPredicted RBP5.99□□□□□ -1.45
SMC4-215ENST00000484799 GPR87Q9BY21 358 aa5.99□□□□□ -1.45
SMC4-215ENST00000484799 PCED1AQ9H1Q7 454 aa5.99□□□□□ -1.45
SMC4-215ENST00000484799 POFUT1Q9H488 388 aa5.99□□□□□ -1.45
SMC4-215ENST00000484799 HDAC5Q9UQL6 1122 aa5.99□□□□□ -1.45
SMC4-215ENST00000484799 GOLGA6L6A8MZA4 724 aa5.98□□□□□ -1.45
SMC4-215ENST00000484799 CDC45O75419 566 aa5.98□□□□□ -1.45
SMC4-215ENST00000484799 PCDH8O95206 1070 aa5.98□□□□□ -1.45
SMC4-215ENST00000484799 F2P00734 622 aa5.98□□□□□ -1.45
SMC4-215ENST00000484799 HNRNPLP14866 589 aaKnown RBP eCLIP5.98□□□□□ -1.45
SMC4-215ENST00000484799 ATP2A2P16615 1042 aaKnown RBP5.98□□□□□ -1.45
SMC4-215ENST00000484799 IL2P60568 153 aa5.98□□□□□ -1.45
SMC4-215ENST00000484799 KLF10Q13118 480 aa5.98□□□□□ -1.45
SMC4-215ENST00000484799 MYBPC3Q14896 1274 aa5.98□□□□□ -1.45
SMC4-215ENST00000484799 CLEC14AQ86T13 490 aa5.98□□□□□ -1.45
SMC4-215ENST00000484799 TMPRSS6Q8IU80 811 aa5.98□□□□□ -1.45
SMC4-215ENST00000484799 DHX37Q8IY37 1157 aaKnown RBP5.98□□□□□ -1.45
SMC4-215ENST00000484799 NIM1KQ8IY84 436 aa5.98□□□□□ -1.45
SMC4-215ENST00000484799 CMTM4Q8IZR5 234 aa5.98□□□□□ -1.45
SMC4-215ENST00000484799 PPM1KQ8N3J5 372 aa5.98□□□□□ -1.45
SMC4-215ENST00000484799 EFHBQ8N7U6 833 aa5.98□□□□□ -1.45
SMC4-215ENST00000484799 OR2W6PQ8NHA6 318 aa5.98□□□□□ -1.45
SMC4-215ENST00000484799 ZNF483Q8TF39 744 aaPredicted RBP5.98□□□□□ -1.45
SMC4-215ENST00000484799 CHTF18Q8WVB6 975 aa5.98□□□□□ -1.45
SMC4-215ENST00000484799 NINJ1Q92982 152 aa5.98□□□□□ -1.45
SMC4-215ENST00000484799 GPR101Q96P66 508 aaPredicted RBP5.98□□□□□ -1.45
SMC4-215ENST00000484799 GPHA2Q96T91 129 aa5.98□□□□□ -1.45
SMC4-215ENST00000484799 SLITRK6Q9H5Y7 841 aa5.98□□□□□ -1.45
SMC4-215ENST00000484799 USP18Q9UMW8 372 aa5.98□□□□□ -1.45
SMC4-215ENST00000484799 WDR33Q9C0J8 1336 aaKnown RBP5.98□□□□□ -1.45
SMC4-215ENST00000484799 LSP1P33241 339 aa5.97□□□□□ -1.45
SMC4-215ENST00000484799 OR5M3Q8NGP4 307 aa5.97□□□□□ -1.45
SMC4-215ENST00000484799 ATXN2LQ8WWM7 1075 aaKnown RBP5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms