RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 KMT5AQ9NQR1 393 aa28.76■■■□□ 2.2
SHOX2-204ENST00000483851 TLL2Q9Y6L7 1015 aa28.76■■■□□ 2.2
SHOX2-204ENST00000483851 CLIC2O15247 247 aa28.76■■■□□ 2.19
SHOX2-204ENST00000483851 LAMC2Q13753 1193 aa28.76■■■□□ 2.19
SHOX2-204ENST00000483851 EMC2Q15006 297 aa28.76■■■□□ 2.19
SHOX2-204ENST00000483851 TAPT1Q6NXT6 567 aa28.76■■■□□ 2.19
SHOX2-204ENST00000483851 SLC7A3Q8WY07 619 aa28.76■■■□□ 2.19
SHOX2-204ENST00000483851 BORCS6Q96GS4 357 aa28.76■■■□□ 2.19
SHOX2-204ENST00000483851 SPATA33Q96N06 139 aa28.76■■■□□ 2.19
SHOX2-204ENST00000483851 CDKN2AIPQ9NXV6 580 aaPredicted RBP28.76■■■□□ 2.19
SHOX2-204ENST00000483851 FRMD4BQ9Y2L6 1034 aa28.76■■■□□ 2.19
SHOX2-204ENST00000483851 RASSF10A6NK89 507 aa28.75■■■□□ 2.19
SHOX2-204ENST00000483851 ZSCAN12O43309 604 aa28.75■■■□□ 2.19
SHOX2-204ENST00000483851 TAF1CQ15572 869 aaPredicted RBP28.75■■■□□ 2.19
SHOX2-204ENST00000483851 HSDL1Q3SXM5 330 aa28.75■■■□□ 2.19
SHOX2-204ENST00000483851 EMID1Q96A84 441 aaPredicted RBP28.75■■■□□ 2.19
SHOX2-204ENST00000483851 SLC16A4O15374 487 aa28.74■■■□□ 2.19
SHOX2-204ENST00000483851 TUBB4AP04350 444 aa28.74■■■□□ 2.19
SHOX2-204ENST00000483851 KCNH2Q12809 1159 aa28.74■■■□□ 2.19
SHOX2-204ENST00000483851 CYP26C1Q6V0L0 522 aa28.74■■■□□ 2.19
SHOX2-204ENST00000483851 MTERF4Q7Z6M4 381 aaKnown RBP28.74■■■□□ 2.19
SHOX2-204ENST00000483851 MAP4K3Q8IVH8 894 aa28.74■■■□□ 2.19
SHOX2-204ENST00000483851 KSR1Q8IVT5 923 aa28.74■■■□□ 2.19
SHOX2-204ENST00000483851 FAM186BQ8IYM0 893 aa28.74■■■□□ 2.19
SHOX2-204ENST00000483851 MAML3Q96JK9 1138 aa28.74■■■□□ 2.19
SHOX2-204ENST00000483851 TBX20Q9UMR3 447 aa28.74■■■□□ 2.19
SHOX2-204ENST00000483851 CCDC169A6NNP5 214 aa28.74■■■□□ 2.19
SHOX2-204ENST00000483851 RNF225M0QZC1 329 aaPredicted RBP28.74■■■□□ 2.19
SHOX2-204ENST00000483851 MAPK13O15264 365 aa28.74■■■□□ 2.19
SHOX2-204ENST00000483851 PPP2R5AQ15172 486 aa28.74■■■□□ 2.19
SHOX2-204ENST00000483851 HHIPL1Q96JK4 782 aa28.74■■■□□ 2.19
SHOX2-204ENST00000483851 KATNBL1Q9H079 304 aa28.74■■■□□ 2.19
SHOX2-204ENST00000483851 SMARCAD1Q9H4L7 1026 aa28.74■■■□□ 2.19
SHOX2-204ENST00000483851 GAS2O43903 313 aaKnown RBP28.73■■■□□ 2.19
SHOX2-204ENST00000483851 AFPP02771 609 aaKnown RBP28.73■■■□□ 2.19
SHOX2-204ENST00000483851 SREBF2Q12772 1141 aa28.73■■■□□ 2.19
SHOX2-204ENST00000483851 IFNL1Q8IU54 200 aa28.73■■■□□ 2.19
SHOX2-204ENST00000483851 POLR3FQ9H1D9 316 aaPredicted RBP28.73■■■□□ 2.19
SHOX2-204ENST00000483851 PDGFCQ9NRA1 345 aa28.73■■■□□ 2.19
SHOX2-204ENST00000483851 GOLGA6L9A6NEM1 432 aa28.72■■■□□ 2.19
SHOX2-204ENST00000483851 GH1P01241 217 aa28.72■■■□□ 2.19
SHOX2-204ENST00000483851 CASP4P49662 377 aa28.72■■■□□ 2.19
SHOX2-204ENST00000483851 NEK11Q8NG66 645 aa28.72■■■□□ 2.19
SHOX2-204ENST00000483851 ATP8B4Q8TF62 1192 aa28.72■■■□□ 2.19
SHOX2-204ENST00000483851 GLG1Q92896 1179 aa28.72■■■□□ 2.19
SHOX2-204ENST00000483851 ABHD16BQ9H3Z7 469 aa28.72■■■□□ 2.19
SHOX2-204ENST00000483851 GTPBP10A4D1E9 387 aaKnown RBP28.72■■■□□ 2.19
SHOX2-204ENST00000483851 KIF18AQ8NI77 898 aa28.72■■■□□ 2.19
SHOX2-204ENST00000483851 BSNDQ8WZ55 320 aa28.72■■■□□ 2.19
SHOX2-204ENST00000483851 ANKRD7Q92527 254 aa28.72■■■□□ 2.19
SHOX2-204ENST00000483851 TINF2Q9BSI4 451 aa28.72■■■□□ 2.19
SHOX2-204ENST00000483851 MMRN2Q9H8L6 949 aa28.72■■■□□ 2.19
SHOX2-204ENST00000483851 CPA4Q9UI42 421 aa28.72■■■□□ 2.19
SHOX2-204ENST00000483851 TLR2O60603 784 aa28.71■■■□□ 2.19
SHOX2-204ENST00000483851 MAFO75444 373 aaPredicted RBP28.71■■■□□ 2.19
SHOX2-204ENST00000483851 SNAI1O95863 264 aaPredicted RBP28.71■■■□□ 2.19
SHOX2-204ENST00000483851 ARL2P36404 184 aa28.71■■■□□ 2.19
SHOX2-204ENST00000483851 CDK17Q00537 523 aa28.71■■■□□ 2.19
SHOX2-204ENST00000483851 ARHGAP1Q07960 439 aa28.71■■■□□ 2.19
SHOX2-204ENST00000483851 KCNMA1Q12791 1236 aa28.71■■■□□ 2.19
SHOX2-204ENST00000483851 MEA1Q16626 185 aa28.71■■■□□ 2.19
SHOX2-204ENST00000483851 REXO1L1PQ8IX06 675 aa28.71■■■□□ 2.19
SHOX2-204ENST00000483851 SLC35C1Q96A29 364 aa28.71■■■□□ 2.19
SHOX2-204ENST00000483851 ZNHIT6Q9NWK9 470 aaKnown RBP28.71■■■□□ 2.19
SHOX2-204ENST00000483851 ARHGAP28Q9P2N2 729 aa28.71■■■□□ 2.19
SHOX2-204ENST00000483851 DENND3A2RUS2 1198 aa28.7■■■□□ 2.19
SHOX2-204ENST00000483851 HNRNPH3P31942 346 aaKnown RBP28.7■■■□□ 2.19
SHOX2-204ENST00000483851 NAMPTP43490 491 aa28.7■■■□□ 2.19
SHOX2-204ENST00000483851 KLK7P49862 253 aa28.7■■■□□ 2.19
SHOX2-204ENST00000483851 MORN1Q5T089 497 aa28.7■■■□□ 2.19
SHOX2-204ENST00000483851 C17orf99Q6UX52 265 aa28.7■■■□□ 2.19
SHOX2-204ENST00000483851 ZNF592Q92610 1267 aa28.7■■■□□ 2.19
SHOX2-204ENST00000483851 JPH2Q9BR39 696 aaPredicted RBP28.7■■■□□ 2.19
SHOX2-204ENST00000483851 NUCKS1Q9H1E3 243 aaKnown RBP28.7■■■□□ 2.19
SHOX2-204ENST00000483851 EXOC3O60645 756 aa28.7■■■□□ 2.18
SHOX2-204ENST00000483851 MCCD1P59942 119 aaPredicted RBP28.7■■■□□ 2.18
SHOX2-204ENST00000483851 SMC1BQ8NDV3 1235 aa28.7■■■□□ 2.18
SHOX2-204ENST00000483851 ZFYVE28Q9HCC9 887 aa28.7■■■□□ 2.18
SHOX2-204ENST00000483851 AGPAT5Q9NUQ2 364 aa28.7■■■□□ 2.18
SHOX2-204ENST00000483851 FAM155AB1AL88 458 aaPredicted RBP28.69■■■□□ 2.18
SHOX2-204ENST00000483851 HOXC6P09630 235 aa28.69■■■□□ 2.18
SHOX2-204ENST00000483851 BRDTQ58F21 947 aaPredicted RBP28.69■■■□□ 2.18
SHOX2-204ENST00000483851 PPTC7Q8NI37 304 aa28.69■■■□□ 2.18
SHOX2-204ENST00000483851 IKZF4Q9H2S9 585 aa28.69■■■□□ 2.18
SHOX2-204ENST00000483851 GPBP1L1Q9HC44 474 aaPredicted RBP28.69■■■□□ 2.18
SHOX2-204ENST00000483851 CYP2J2P51589 502 aa28.68■■■□□ 2.18
SHOX2-204ENST00000483851 MAP2K5Q13163 448 aa28.68■■■□□ 2.18
SHOX2-204ENST00000483851 IQSEC1Q6DN90 963 aa28.68■■■□□ 2.18
SHOX2-204ENST00000483851 XXYLT1Q8NBI6 393 aa28.68■■■□□ 2.18
SHOX2-204ENST00000483851 COPS5Q92905 334 aa28.68■■■□□ 2.18
SHOX2-204ENST00000483851 PLCB1Q9NQ66 1216 aa28.68■■■□□ 2.18
SHOX2-204ENST00000483851 FAM207AQ9NSI2 230 aaPredicted RBP28.68■■■□□ 2.18
SHOX2-204ENST00000483851 CEP72Q9P209 647 aa28.68■■■□□ 2.18
SHOX2-204ENST00000483851 PPP2R2CQ9Y2T4 447 aa28.68■■■□□ 2.18
SHOX2-204ENST00000483851 HBP1O60381 514 aa28.68■■■□□ 2.18
SHOX2-204ENST00000483851 INTS8Q75QN2 995 aaKnown RBP28.68■■■□□ 2.18
SHOX2-204ENST00000483851 TCP11Q8WWU5 503 aa28.68■■■□□ 2.18
SHOX2-204ENST00000483851 ERAP1Q9NZ08 941 aa28.68■■■□□ 2.18
SHOX2-204ENST00000483851 PLAGL2Q9UPG8 496 aa28.68■■■□□ 2.18
SHOX2-204ENST00000483851 SOWAHDA6NJG2 315 aa28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms