RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 ANP32AP39687 249 aaKnown RBP17.31■□□□□ 0.36
RPP40-206ENST00000483546 PTENP60484 403 aa17.31■□□□□ 0.36
RPP40-206ENST00000483546 GRIN1Q05586 938 aa17.31■□□□□ 0.36
RPP40-206ENST00000483546 ZRSR1Q15695 479 aaKnown RBP17.31■□□□□ 0.36
RPP40-206ENST00000483546 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.31■□□□□ 0.36
RPP40-206ENST00000483546 KSR1Q8IVT5 923 aa17.31■□□□□ 0.36
RPP40-206ENST00000483546 MYOCDQ8IZQ8 938 aa17.31■□□□□ 0.36
RPP40-206ENST00000483546 RNF149Q8NC42 400 aa17.31■□□□□ 0.36
RPP40-206ENST00000483546 LRCH3Q96II8 777 aa17.31■□□□□ 0.36
RPP40-206ENST00000483546 ZBED2Q9BTP6 218 aa17.31■□□□□ 0.36
RPP40-206ENST00000483546 TMX1Q9H3N1 280 aa17.31■□□□□ 0.36
RPP40-206ENST00000483546 RGS18Q9NS28 235 aa17.31■□□□□ 0.36
RPP40-206ENST00000483546 DACT1Q9NYF0 836 aa17.31■□□□□ 0.36
RPP40-206ENST00000483546 TFIP11Q9UBB9 837 aaKnown RBP17.31■□□□□ 0.36
RPP40-206ENST00000483546 STK17AQ9UEE5 414 aa17.31■□□□□ 0.36
RPP40-206ENST00000483546 KCNG1Q9UIX4 513 aa17.31■□□□□ 0.36
RPP40-206ENST00000483546 ZDHHC9Q9Y397 364 aa17.31■□□□□ 0.36
RPP40-206ENST00000483546 TCHHQ07283 1943 aa17.3■□□□□ 0.36
RPP40-206ENST00000483546 DENND3A2RUS2 1198 aa17.3■□□□□ 0.36
RPP40-206ENST00000483546 GRXCR1A8MXD5 290 aa17.3■□□□□ 0.36
RPP40-206ENST00000483546 CUTAO60888 179 aa17.3■□□□□ 0.36
RPP40-206ENST00000483546 STAG3L1P0CL83 205 aa17.3■□□□□ 0.36
RPP40-206ENST00000483546 SRGAP2CP0DJJ0 459 aa17.3■□□□□ 0.36
RPP40-206ENST00000483546 GLRA2P23416 452 aa17.3■□□□□ 0.36
RPP40-206ENST00000483546 GUCY2CP25092 1073 aa17.3■□□□□ 0.36
RPP40-206ENST00000483546 KRT85P78386 507 aa17.3■□□□□ 0.36
RPP40-206ENST00000483546 FAM102BQ5T8I3 360 aa17.3■□□□□ 0.36
RPP40-206ENST00000483546 ZNF697Q5TEC3 545 aa17.3■□□□□ 0.36
RPP40-206ENST00000483546 SLC24A5Q71RS6 500 aa17.3■□□□□ 0.36
RPP40-206ENST00000483546 KCNK18Q7Z418 384 aa17.3■□□□□ 0.36
RPP40-206ENST00000483546 SYMPKQ92797 1274 aaKnown RBP17.3■□□□□ 0.36
RPP40-206ENST00000483546 TIFAQ96CG3 184 aa17.3■□□□□ 0.36
RPP40-206ENST00000483546 DRC1Q96MC2 740 aa17.3■□□□□ 0.36
RPP40-206ENST00000483546 RAD9AQ99638 391 aa17.3■□□□□ 0.36
RPP40-206ENST00000483546 C2orf40Q9H1Z8 148 aa17.3■□□□□ 0.36
RPP40-206ENST00000483546 C17orf75Q9HAS0 396 aa17.3■□□□□ 0.36
RPP40-206ENST00000483546 INSL6Q9Y581 213 aa17.3■□□□□ 0.36
RPP40-206ENST00000483546 TLL1O43897 1013 aa17.29■□□□□ 0.36
RPP40-206ENST00000483546 PLA2G4BP0C869 781 aa17.29■□□□□ 0.36
RPP40-206ENST00000483546 PLCG1P19174 1290 aa17.29■□□□□ 0.36
RPP40-206ENST00000483546 NAMPTP43490 491 aa17.29■□□□□ 0.36
RPP40-206ENST00000483546 SARSP49591 514 aaKnown RBP17.29■□□□□ 0.36
RPP40-206ENST00000483546 SLC12A3P55017 1021 aa17.29■□□□□ 0.36
RPP40-206ENST00000483546 HTRA4P83105 476 aaPredicted RBP17.29■□□□□ 0.36
RPP40-206ENST00000483546 DNM1Q05193 864 aaKnown RBP17.29■□□□□ 0.36
RPP40-206ENST00000483546 CAPSQ13938 189 aa17.29■□□□□ 0.36
RPP40-206ENST00000483546 DSC3Q14574 896 aa17.29■□□□□ 0.36
RPP40-206ENST00000483546 KARSQ15046 597 aaKnown RBP17.29■□□□□ 0.36
RPP40-206ENST00000483546 RINT1Q6NUQ1 792 aa17.29■□□□□ 0.36
RPP40-206ENST00000483546 CCDC73Q6ZRK6 1079 aa17.29■□□□□ 0.36
RPP40-206ENST00000483546 C1orf186Q6ZWK4 172 aa17.29■□□□□ 0.36
RPP40-206ENST00000483546 CATSPER4Q7RTX7 472 aa17.29■□□□□ 0.36
RPP40-206ENST00000483546 NPAS4Q8IUM7 802 aa17.29■□□□□ 0.36
RPP40-206ENST00000483546 ASAP3Q8TDY4 903 aa17.29■□□□□ 0.36
RPP40-206ENST00000483546 LINC01599Q8WXQ3 324 aa17.29■□□□□ 0.36
RPP40-206ENST00000483546 EPSTI1Q96J88 318 aa17.29■□□□□ 0.36
RPP40-206ENST00000483546 ZNF668Q96K58 619 aaPredicted RBP17.29■□□□□ 0.36
RPP40-206ENST00000483546 IFT74Q96LB3 600 aa17.29■□□□□ 0.36
RPP40-206ENST00000483546 CLIC6Q96NY7 704 aa17.29■□□□□ 0.36
RPP40-206ENST00000483546 ADAM2Q99965 735 aa17.29■□□□□ 0.36
RPP40-206ENST00000483546 TRAIPQ9BWF2 469 aa17.29■□□□□ 0.36
RPP40-206ENST00000483546 ELAC1Q9H777 363 aaKnown RBP17.29■□□□□ 0.36
RPP40-206ENST00000483546 RCOR1Q9UKL0 485 aa17.29■□□□□ 0.36
RPP40-206ENST00000483546 PHLPP2Q6ZVD8 1323 aa17.28■□□□□ 0.36
RPP40-206ENST00000483546 SKIP12755 728 aa17.28■□□□□ 0.36
RPP40-206ENST00000483546 AXLP30530 894 aa17.28■□□□□ 0.36
RPP40-206ENST00000483546 DDIT3P35638 169 aa17.28■□□□□ 0.36
RPP40-206ENST00000483546 NCBP1Q09161 790 aaKnown RBP17.28■□□□□ 0.36
RPP40-206ENST00000483546 CDCA2Q69YH5 1023 aaPredicted RBP17.28■□□□□ 0.36
RPP40-206ENST00000483546 RTN4RL1Q86UN2 441 aaPredicted RBP17.28■□□□□ 0.36
RPP40-206ENST00000483546 ZBTB8OSQ8IWT0 167 aa17.28■□□□□ 0.36
RPP40-206ENST00000483546 LARP4BQ92615 738 aaKnown RBP17.28■□□□□ 0.36
RPP40-206ENST00000483546 RAD54LQ92698 747 aa17.28■□□□□ 0.36
RPP40-206ENST00000483546 SLC28A3Q9HAS3 691 aa17.28■□□□□ 0.36
RPP40-206ENST00000483546 GPRC5CQ9NQ84 441 aa17.28■□□□□ 0.36
RPP40-206ENST00000483546 AGPAT5Q9NUQ2 364 aa17.28■□□□□ 0.36
RPP40-206ENST00000483546 LRRIQ4A6NIV6 560 aa17.27■□□□□ 0.36
RPP40-206ENST00000483546 C9IYK1 514 aa17.27■□□□□ 0.36
RPP40-206ENST00000483546 ERLIN2O94905 339 aa17.27■□□□□ 0.36
RPP40-206ENST00000483546 SSBP05455 408 aaKnown RBP eCLIP17.27■□□□□ 0.36
RPP40-206ENST00000483546 PBX2P40425 430 aa17.27■□□□□ 0.36
RPP40-206ENST00000483546 RABGGTBP53611 331 aa17.27■□□□□ 0.36
RPP40-206ENST00000483546 FAM189BP81408 668 aa17.27■□□□□ 0.36
RPP40-206ENST00000483546 FOXD4L6Q3SYB3 417 aaPredicted RBP17.27■□□□□ 0.36
RPP40-206ENST00000483546 FOXD4L3Q6VB84 417 aaPredicted RBP17.27■□□□□ 0.36
RPP40-206ENST00000483546 MAEAQ7L5Y9 396 aa17.27■□□□□ 0.36
RPP40-206ENST00000483546 CRIPAKQ8N1N5 446 aa17.27■□□□□ 0.36
RPP40-206ENST00000483546 RSPH1Q8WYR4 309 aa17.27■□□□□ 0.36
RPP40-206ENST00000483546 CCDC51Q96ER9 411 aa17.27■□□□□ 0.36
RPP40-206ENST00000483546 PRIMPOLQ96LW4 560 aa17.27■□□□□ 0.36
RPP40-206ENST00000483546 PLIN2Q99541 437 aa17.27■□□□□ 0.36
RPP40-206ENST00000483546 RUSC1Q9BVN2 902 aa17.27■□□□□ 0.36
RPP40-206ENST00000483546 SCAND2PQ9GZW5 306 aaPredicted RBP17.27■□□□□ 0.36
RPP40-206ENST00000483546 BLOC1S4Q9NUP1 217 aa17.27■□□□□ 0.36
RPP40-206ENST00000483546 LRFN2Q9ULH4 789 aa17.27■□□□□ 0.36
RPP40-206ENST00000483546 ODF2LQ9ULJ1 636 aa17.27■□□□□ 0.36
RPP40-206ENST00000483546 CIZ1Q9ULV3 898 aaPredicted RBP17.27■□□□□ 0.36
RPP40-206ENST00000483546 YBX2Q9Y2T7 364 aaKnown RBP17.27■□□□□ 0.36
RPP40-206ENST00000483546 LAMA2P24043 3122 aaKnown RBP17.27■□□□□ 0.35
RPP40-206ENST00000483546 INO80B-WBP1J3KQ70 363 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms