RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 POLR3BQ9NW08 1133 aaPredicted RBP4.69□□□□□ -1.66
LAPTM4A-202ENST00000483117 PARPBPQ9NWS1 579 aa4.69□□□□□ -1.66
LAPTM4A-202ENST00000483117 WDR33Q9C0J8 1336 aaKnown RBP4.69□□□□□ -1.66
LAPTM4A-202ENST00000483117 CBX4O00257 560 aa4.68□□□□□ -1.66
LAPTM4A-202ENST00000483117 TOX4O94842 621 aa4.68□□□□□ -1.66
LAPTM4A-202ENST00000483117 JMJD7P0C870 316 aa4.68□□□□□ -1.66
LAPTM4A-202ENST00000483117 HNRNPLP14866 589 aaKnown RBP eCLIP4.68□□□□□ -1.66
LAPTM4A-202ENST00000483117 MAKP20794 623 aa4.68□□□□□ -1.66
LAPTM4A-202ENST00000483117 CDCA2Q69YH5 1023 aaPredicted RBP4.68□□□□□ -1.66
LAPTM4A-202ENST00000483117 ESRP1Q6NXG1 681 aaKnown RBP4.68□□□□□ -1.66
LAPTM4A-202ENST00000483117 LDLRAD3Q86YD5 345 aa4.68□□□□□ -1.66
LAPTM4A-202ENST00000483117 ELF4Q99607 663 aaPredicted RBP4.68□□□□□ -1.66
LAPTM4A-202ENST00000483117 TCF25Q9BQ70 676 aa4.68□□□□□ -1.66
LAPTM4A-202ENST00000483117 IL23AQ9NPF7 189 aa4.68□□□□□ -1.66
LAPTM4A-202ENST00000483117 B4GALT6Q9UBX8 382 aa4.68□□□□□ -1.66
LAPTM4A-202ENST00000483117 A0A087X1B8 175 aa4.67□□□□□ -1.66
LAPTM4A-202ENST00000483117 RPS6KA4O75676 772 aa4.67□□□□□ -1.66
LAPTM4A-202ENST00000483117 APOL3O95236 402 aa4.67□□□□□ -1.66
LAPTM4A-202ENST00000483117 VSIG10L2P0DP72 767 aa4.67□□□□□ -1.66
LAPTM4A-202ENST00000483117 MAN2A2P49641 1150 aa4.67□□□□□ -1.66
LAPTM4A-202ENST00000483117 CNGB1Q14028 1251 aaPredicted RBP4.67□□□□□ -1.66
LAPTM4A-202ENST00000483117 EPHA7Q15375 998 aa4.67□□□□□ -1.66
LAPTM4A-202ENST00000483117 CREB3L3Q68CJ9 461 aa4.67□□□□□ -1.66
LAPTM4A-202ENST00000483117 KRT40Q6A162 431 aa4.67□□□□□ -1.66
LAPTM4A-202ENST00000483117 BMP8AQ7Z5Y6 402 aa4.67□□□□□ -1.66
LAPTM4A-202ENST00000483117 GSPT2Q8IYD1 628 aaKnown RBP4.67□□□□□ -1.66
LAPTM4A-202ENST00000483117 SH3TC2Q8TF17 1288 aa4.67□□□□□ -1.66
LAPTM4A-202ENST00000483117 RPGRQ92834 1020 aaKnown RBP4.67□□□□□ -1.66
LAPTM4A-202ENST00000483117 HAPLN2Q9GZV7 340 aa4.67□□□□□ -1.66
LAPTM4A-202ENST00000483117 H2AFY2Q9P0M6 372 aaPredicted RBP4.67□□□□□ -1.66
LAPTM4A-202ENST00000483117 NCDNQ9UBB6 729 aa4.67□□□□□ -1.66
LAPTM4A-202ENST00000483117 RCAN3Q9UKA8 241 aa4.67□□□□□ -1.66
LAPTM4A-202ENST00000483117 PRPF6O94906 941 aaKnown RBP4.66□□□□□ -1.66
LAPTM4A-202ENST00000483117 ASMTLO95671 621 aa4.66□□□□□ -1.66
LAPTM4A-202ENST00000483117 INHBCP55103 352 aa4.66□□□□□ -1.66
LAPTM4A-202ENST00000483117 BCAR1P56945 870 aa4.66□□□□□ -1.66
LAPTM4A-202ENST00000483117 ADCY2Q08462 1091 aa4.66□□□□□ -1.66
LAPTM4A-202ENST00000483117 NFE2L2Q16236 605 aa4.66□□□□□ -1.66
LAPTM4A-202ENST00000483117 SMN1Q16637 294 aaKnown RBP4.66□□□□□ -1.66
LAPTM4A-202ENST00000483117 CFAP100Q494V2 611 aa4.66□□□□□ -1.66
LAPTM4A-202ENST00000483117 GAGE13Q4V321 117 aa4.66□□□□□ -1.66
LAPTM4A-202ENST00000483117 FKBP15Q5T1M5 1219 aa4.66□□□□□ -1.66
LAPTM4A-202ENST00000483117 UNQ6494/PRO21346Q6UXR6 183 aa4.66□□□□□ -1.66
LAPTM4A-202ENST00000483117 UBE2R2Q712K3 238 aaPredicted RBP4.66□□□□□ -1.66
LAPTM4A-202ENST00000483117 NME9Q86XW9 330 aa4.66□□□□□ -1.66
LAPTM4A-202ENST00000483117 ELOA2Q8IYF1 753 aaPredicted RBP4.66□□□□□ -1.66
LAPTM4A-202ENST00000483117 RTF1Q92541 710 aaKnown RBP4.66□□□□□ -1.66
LAPTM4A-202ENST00000483117 PGBD4Q96DM1 585 aa4.66□□□□□ -1.66
LAPTM4A-202ENST00000483117 MYL10Q9BUA6 226 aa4.66□□□□□ -1.66
LAPTM4A-202ENST00000483117 GPR87Q9BY21 358 aa4.66□□□□□ -1.66
LAPTM4A-202ENST00000483117 TOMM22Q9NS69 142 aa4.66□□□□□ -1.66
LAPTM4A-202ENST00000483117 GPRC5BQ9NZH0 403 aa4.66□□□□□ -1.66
LAPTM4A-202ENST00000483117 XDHP47989 1333 aa4.66□□□□□ -1.66
LAPTM4A-202ENST00000483117 DAPK3O43293 454 aa4.65□□□□□ -1.67
LAPTM4A-202ENST00000483117 FAM20BO75063 409 aa4.65□□□□□ -1.67
LAPTM4A-202ENST00000483117 KRT4P19013 534 aa4.65□□□□□ -1.67
LAPTM4A-202ENST00000483117 FLT3P36888 993 aa4.65□□□□□ -1.67
LAPTM4A-202ENST00000483117 RABGGTBP53611 331 aa4.65□□□□□ -1.67
LAPTM4A-202ENST00000483117 INHBEP58166 350 aa4.65□□□□□ -1.67
LAPTM4A-202ENST00000483117 PABPC4Q13310 644 aaKnown RBP eCLIP4.65□□□□□ -1.67
LAPTM4A-202ENST00000483117 TOB2Q14106 344 aaPredicted RBP4.65□□□□□ -1.67
LAPTM4A-202ENST00000483117 KANSL1Q7Z3B3 1105 aa4.65□□□□□ -1.67
LAPTM4A-202ENST00000483117 C7orf31Q8N865 590 aa4.65□□□□□ -1.67
LAPTM4A-202ENST00000483117 MB21D1Q8N884 522 aa4.65□□□□□ -1.67
LAPTM4A-202ENST00000483117 ATXN2LQ8WWM7 1075 aaKnown RBP4.65□□□□□ -1.67
LAPTM4A-202ENST00000483117 MRFAP1L1Q96HT8 127 aa4.65□□□□□ -1.67
LAPTM4A-202ENST00000483117 PITHD1Q9GZP4 211 aaPredicted RBP4.65□□□□□ -1.67
LAPTM4A-202ENST00000483117 POFUT1Q9H488 388 aa4.65□□□□□ -1.67
LAPTM4A-202ENST00000483117 MTG2Q9H4K7 406 aa4.65□□□□□ -1.67
LAPTM4A-202ENST00000483117 OXSMQ9NWU1 459 aa4.65□□□□□ -1.67
LAPTM4A-202ENST00000483117 SPO11Q9Y5K1 396 aa4.65□□□□□ -1.67
LAPTM4A-202ENST00000483117 A0A0A6YYJ9 748 aa4.64□□□□□ -1.67
LAPTM4A-202ENST00000483117 A0A0A6YYK5 440 aaPredicted RBP4.64□□□□□ -1.67
LAPTM4A-202ENST00000483117 KLRG2A4D1S0 409 aaPredicted RBP4.64□□□□□ -1.67
LAPTM4A-202ENST00000483117 STC2O76061 302 aa4.64□□□□□ -1.67
LAPTM4A-202ENST00000483117 PEX11BO96011 259 aa4.64□□□□□ -1.67
LAPTM4A-202ENST00000483117 JUNP05412 331 aaKnown RBP4.64□□□□□ -1.67
LAPTM4A-202ENST00000483117 ATP2A2P16615 1042 aaKnown RBP4.64□□□□□ -1.67
LAPTM4A-202ENST00000483117 KIR2DL3P43628 341 aa4.64□□□□□ -1.67
LAPTM4A-202ENST00000483117 ADCY1Q08828 1119 aa4.64□□□□□ -1.67
LAPTM4A-202ENST00000483117 C21orf62-AS1Q17RA5 79 aa4.64□□□□□ -1.67
LAPTM4A-202ENST00000483117 C1QL3Q5VWW1 255 aa4.64□□□□□ -1.67
LAPTM4A-202ENST00000483117 Q6ZPA2 131 aa4.64□□□□□ -1.67
LAPTM4A-202ENST00000483117 ZNF662Q6ZS27 426 aa4.64□□□□□ -1.67
LAPTM4A-202ENST00000483117 PHYKPLQ8IUZ5 450 aa4.64□□□□□ -1.67
LAPTM4A-202ENST00000483117 NXPE1Q8N323 547 aa4.64□□□□□ -1.67
LAPTM4A-202ENST00000483117 SREK1Q8WXA9 508 aaKnown RBP4.64□□□□□ -1.67
LAPTM4A-202ENST00000483117 ARL8AQ96BM9 186 aa4.64□□□□□ -1.67
LAPTM4A-202ENST00000483117 ZNF512Q96ME7 567 aaPredicted RBP4.64□□□□□ -1.67
LAPTM4A-202ENST00000483117 MNTQ99583 582 aa4.64□□□□□ -1.67
LAPTM4A-202ENST00000483117 NOL10Q9BSC4 688 aaKnown RBP4.64□□□□□ -1.67
LAPTM4A-202ENST00000483117 SOX7Q9BT81 388 aa4.64□□□□□ -1.67
LAPTM4A-202ENST00000483117 ZSWIM4Q9H7M6 989 aa4.64□□□□□ -1.67
LAPTM4A-202ENST00000483117 NRDE2Q9H7Z3 1164 aa4.64□□□□□ -1.67
LAPTM4A-202ENST00000483117 ZMAT4Q9H898 229 aa4.64□□□□□ -1.67
LAPTM4A-202ENST00000483117 TMEM260Q9NX78 707 aa4.64□□□□□ -1.67
LAPTM4A-202ENST00000483117 OPHN1O60890 802 aa4.63□□□□□ -1.67
LAPTM4A-202ENST00000483117 SMAD3P84022 425 aaKnown RBP4.63□□□□□ -1.67
LAPTM4A-202ENST00000483117 PURAQ00577 322 aaKnown RBP4.63□□□□□ -1.67
LAPTM4A-202ENST00000483117 SPIDRQ14159 915 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms