RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 GIT2Q14161 759 aa13.71□□□□□ -0.21
VPS52-218ENST00000482399 TMEM119Q4V9L6 283 aa13.71□□□□□ -0.21
VPS52-218ENST00000482399 EPC2Q52LR7 807 aa13.71□□□□□ -0.21
VPS52-218ENST00000482399 TRPM8Q7Z2W7 1104 aa13.71□□□□□ -0.21
VPS52-218ENST00000482399 TATDN2Q93075 761 aa13.71□□□□□ -0.21
VPS52-218ENST00000482399 C8orf37Q96NL8 207 aa13.71□□□□□ -0.21
VPS52-218ENST00000482399 SLC12A6Q9UHW9 1150 aa13.71□□□□□ -0.21
VPS52-218ENST00000482399 KCNG1Q9UIX4 513 aa13.71□□□□□ -0.21
VPS52-218ENST00000482399 IGSF9BQ9UPX0 1349 aa13.71□□□□□ -0.22
VPS52-218ENST00000482399 ARHGEF35A5YM69 484 aa13.7□□□□□ -0.22
VPS52-218ENST00000482399 K7ENM7 598 aa13.7□□□□□ -0.22
VPS52-218ENST00000482399 FOXN3O00409 490 aaPredicted RBP13.7□□□□□ -0.22
VPS52-218ENST00000482399 GCFC2P16383 781 aaKnown RBP13.7□□□□□ -0.22
VPS52-218ENST00000482399 SEPT2Q15019 361 aa13.7□□□□□ -0.22
VPS52-218ENST00000482399 TRAPPC3LQ5T215 181 aa13.7□□□□□ -0.22
VPS52-218ENST00000482399 FRMD5Q7Z6J6 570 aa13.7□□□□□ -0.22
VPS52-218ENST00000482399 CD302Q8IX05 232 aa13.7□□□□□ -0.22
VPS52-218ENST00000482399 SLFN12Q8IYM2 578 aa13.7□□□□□ -0.22
VPS52-218ENST00000482399 ARHGEF1Q92888 912 aaKnown RBP13.7□□□□□ -0.22
VPS52-218ENST00000482399 ZNF653Q96CK0 615 aa13.7□□□□□ -0.22
VPS52-218ENST00000482399 STMN4Q9H169 189 aaPredicted RBP13.7□□□□□ -0.22
VPS52-218ENST00000482399 TYW1Q9NV66 732 aaKnown RBP13.7□□□□□ -0.22
VPS52-218ENST00000482399 CTNNAL1Q9UBT7 734 aa13.7□□□□□ -0.22
VPS52-218ENST00000482399 ANKRD62A6NC57 917 aa13.7□□□□□ -0.22
VPS52-218ENST00000482399 TOM1O60784 492 aa13.7□□□□□ -0.22
VPS52-218ENST00000482399 GAS7O60861 476 aa13.7□□□□□ -0.22
VPS52-218ENST00000482399 SUN1O94901 812 aa13.7□□□□□ -0.22
VPS52-218ENST00000482399 BCRP11274 1271 aa13.7□□□□□ -0.22
VPS52-218ENST00000482399 PCK1P35558 622 aa13.7□□□□□ -0.22
VPS52-218ENST00000482399 KCNJ2P63252 427 aa13.7□□□□□ -0.22
VPS52-218ENST00000482399 SGO2Q562F6 1265 aa13.7□□□□□ -0.22
VPS52-218ENST00000482399 ARSHQ5FYA8 562 aa13.7□□□□□ -0.22
VPS52-218ENST00000482399 UBAP2Q5T6F2 1119 aaKnown RBP13.7□□□□□ -0.22
VPS52-218ENST00000482399 AGBL2Q5U5Z8 902 aa13.7□□□□□ -0.22
VPS52-218ENST00000482399 RPUSD2Q8IZ73 545 aaKnown RBP13.7□□□□□ -0.22
VPS52-218ENST00000482399 ATG4AQ8WYN0 398 aa13.7□□□□□ -0.22
VPS52-218ENST00000482399 ALG3Q92685 438 aa13.7□□□□□ -0.22
VPS52-218ENST00000482399 SLC35C1Q96A29 364 aa13.7□□□□□ -0.22
VPS52-218ENST00000482399 SPDL1Q96EA4 605 aa13.7□□□□□ -0.22
VPS52-218ENST00000482399 CALR3Q96L12 384 aaKnown RBP13.7□□□□□ -0.22
VPS52-218ENST00000482399 DDX23Q9BUQ8 820 aaKnown RBP13.7□□□□□ -0.22
VPS52-218ENST00000482399 RIOX1Q9H6W3 641 aa13.7□□□□□ -0.22
VPS52-218ENST00000482399 TRIM33Q9UPN9 1127 aa13.7□□□□□ -0.22
VPS52-218ENST00000482399 TJP1Q07157 1748 aa13.7□□□□□ -0.22
VPS52-218ENST00000482399 WDR91A4D1P6 747 aa13.7□□□□□ -0.22
VPS52-218ENST00000482399 IGF2BP3O00425 579 aaKnown RBP eCLIP13.7□□□□□ -0.22
VPS52-218ENST00000482399 ATP11AP98196 1134 aa13.7□□□□□ -0.22
VPS52-218ENST00000482399 KYNUQ16719 465 aa13.7□□□□□ -0.22
VPS52-218ENST00000482399 ZCWPW2Q504Y3 356 aa13.7□□□□□ -0.22
VPS52-218ENST00000482399 LRCH2Q5VUJ6 765 aa13.7□□□□□ -0.22
VPS52-218ENST00000482399 KAZNQ674X7 775 aa13.7□□□□□ -0.22
VPS52-218ENST00000482399 ZNF572Q7Z3I7 529 aaPredicted RBP13.7□□□□□ -0.22
VPS52-218ENST00000482399 FBXO11Q86XK2 927 aa13.7□□□□□ -0.22
VPS52-218ENST00000482399 SLC17A8Q8NDX2 589 aa13.7□□□□□ -0.22
VPS52-218ENST00000482399 DYDC2Q96IM9 177 aa13.7□□□□□ -0.22
VPS52-218ENST00000482399 PWWP2AQ96N64 755 aa13.7□□□□□ -0.22
VPS52-218ENST00000482399 MTFR1LQ9H019 292 aa13.7□□□□□ -0.22
VPS52-218ENST00000482399 PABPC3Q9H361 631 aaKnown RBP13.7□□□□□ -0.22
VPS52-218ENST00000482399 SUCLA2Q9P2R7 463 aaPredicted RBP13.7□□□□□ -0.22
VPS52-218ENST00000482399 DISP2A7MBM2 1401 aa13.7□□□□□ -0.22
VPS52-218ENST00000482399 TISP43B9A030 160 aa13.69□□□□□ -0.22
VPS52-218ENST00000482399 CLDN3O15551 220 aa13.69□□□□□ -0.22
VPS52-218ENST00000482399 CALCAP01258 141 aa13.69□□□□□ -0.22
VPS52-218ENST00000482399 CREB1P16220 341 aa13.69□□□□□ -0.22
VPS52-218ENST00000482399 KRT15P19012 456 aa13.69□□□□□ -0.22
VPS52-218ENST00000482399 DRD4P21917 467 aa13.69□□□□□ -0.22
VPS52-218ENST00000482399 COMTP21964 271 aa13.69□□□□□ -0.22
VPS52-218ENST00000482399 GRAPQ13588 217 aa13.69□□□□□ -0.22
VPS52-218ENST00000482399 GPATCH4Q5T3I0 446 aaKnown RBP13.69□□□□□ -0.22
VPS52-218ENST00000482399 C6orf118Q5T5N4 469 aa13.69□□□□□ -0.22
VPS52-218ENST00000482399 CPNE8Q86YQ8 564 aa13.69□□□□□ -0.22
VPS52-218ENST00000482399 LNX1Q8TBB1 728 aaPredicted RBP13.69□□□□□ -0.22
VPS52-218ENST00000482399 GRAPLQ8TC17 118 aaPredicted RBP13.69□□□□□ -0.22
VPS52-218ENST00000482399 C9orf72Q96LT7 481 aa13.69□□□□□ -0.22
VPS52-218ENST00000482399 FAM129AQ9BZQ8 928 aa13.69□□□□□ -0.22
VPS52-218ENST00000482399 INTS2Q9H0H0 1204 aaKnown RBP13.69□□□□□ -0.22
VPS52-218ENST00000482399 KCTD10Q9H3F6 313 aa13.69□□□□□ -0.22
VPS52-218ENST00000482399 DAGLAQ9Y4D2 1042 aa13.69□□□□□ -0.22
VPS52-218ENST00000482399 ABCB11O95342 1321 aa13.69□□□□□ -0.22
VPS52-218ENST00000482399 TMEM120BA0PK00 339 aa13.69□□□□□ -0.22
VPS52-218ENST00000482399 UBAP1LF5GYI3 381 aa13.69□□□□□ -0.22
VPS52-218ENST00000482399 RBAK-RBAKDNI3L0D1 243 aa13.69□□□□□ -0.22
VPS52-218ENST00000482399 SORBS3O60504 671 aa13.69□□□□□ -0.22
VPS52-218ENST00000482399 SPAG7O75391 227 aa13.69□□□□□ -0.22
VPS52-218ENST00000482399 BRAFP15056 766 aa13.69□□□□□ -0.22
VPS52-218ENST00000482399 EDRF1Q3B7T1 1238 aa13.69□□□□□ -0.22
VPS52-218ENST00000482399 PPP4R3CPQ6ZMV5 832 aa13.69□□□□□ -0.22
VPS52-218ENST00000482399 STXBP4Q6ZWJ1 553 aa13.69□□□□□ -0.22
VPS52-218ENST00000482399 ARMC9Q7Z3E5 817 aa13.69□□□□□ -0.22
VPS52-218ENST00000482399 PPP1R12CQ9BZL4 782 aa13.69□□□□□ -0.22
VPS52-218ENST00000482399 TRIM6Q9C030 488 aaPredicted RBP13.69□□□□□ -0.22
VPS52-218ENST00000482399 PARVGQ9HBI0 331 aa13.69□□□□□ -0.22
VPS52-218ENST00000482399 DUOX1Q9NRD9 1551 aa13.69□□□□□ -0.22
VPS52-218ENST00000482399 KLHL14Q9P2G3 628 aa13.69□□□□□ -0.22
VPS52-218ENST00000482399 ENO4A6NNW6 628 aa13.69□□□□□ -0.22
VPS52-218ENST00000482399 ANP32DO95626 131 aa13.69□□□□□ -0.22
VPS52-218ENST00000482399 ATP6V1G2O95670 118 aa13.69□□□□□ -0.22
VPS52-218ENST00000482399 IFNB1P01574 187 aa13.69□□□□□ -0.22
VPS52-218ENST00000482399 RPL21P46778 160 aaKnown RBP13.69□□□□□ -0.22
VPS52-218ENST00000482399 FMO5P49326 533 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms