RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 KCNC3Q14003 757 aa10.89□□□□□ -0.67
TMEM39A-207ENST00000482162 CLLU1OSQ5K130 101 aa10.89□□□□□ -0.67
TMEM39A-207ENST00000482162 PLA2G4FQ68DD2 849 aa10.89□□□□□ -0.67
TMEM39A-207ENST00000482162 PDE12Q6L8Q7 609 aaKnown RBP10.89□□□□□ -0.67
TMEM39A-207ENST00000482162 DIS3L2Q8IYB7 885 aaKnown RBP10.89□□□□□ -0.67
TMEM39A-207ENST00000482162 EFHBQ8N7U6 833 aa10.89□□□□□ -0.67
TMEM39A-207ENST00000482162 COLGALT1Q8NBJ5 622 aa10.89□□□□□ -0.67
TMEM39A-207ENST00000482162 POF1BQ8WVV4 589 aa10.89□□□□□ -0.67
TMEM39A-207ENST00000482162 KHSRPQ92945 711 aaKnown RBP eCLIP10.89□□□□□ -0.672e-7■■□□□ 13.8
TMEM39A-207ENST00000482162 ZNF668Q96K58 619 aaPredicted RBP10.89□□□□□ -0.67
TMEM39A-207ENST00000482162 MSLNLQ96KJ4 702 aa10.89□□□□□ -0.67
TMEM39A-207ENST00000482162 FDXACB1Q9BRP7 624 aaPredicted RBP10.89□□□□□ -0.67
TMEM39A-207ENST00000482162 INO80BQ9C086 356 aaPredicted RBP10.89□□□□□ -0.67
TMEM39A-207ENST00000482162 AAASQ9NRG9 546 aa10.89□□□□□ -0.67
TMEM39A-207ENST00000482162 DACT1Q9NYF0 836 aa10.89□□□□□ -0.67
TMEM39A-207ENST00000482162 HCSTQ9UBK5 93 aa10.89□□□□□ -0.67
TMEM39A-207ENST00000482162 PCDHA12Q9UN75 941 aa10.89□□□□□ -0.67
TMEM39A-207ENST00000482162 PCDHB12Q9Y5F1 795 aa10.89□□□□□ -0.67
TMEM39A-207ENST00000482162 PI4K2BG5E9Z4 385 aa10.88□□□□□ -0.67
TMEM39A-207ENST00000482162 H3BQ06 376 aaPredicted RBP10.88□□□□□ -0.67
TMEM39A-207ENST00000482162 ZBTB39O15060 712 aa10.88□□□□□ -0.67
TMEM39A-207ENST00000482162 ASAP2O43150 1006 aa10.88□□□□□ -0.67
TMEM39A-207ENST00000482162 GAS2O43903 313 aaKnown RBP10.88□□□□□ -0.67
TMEM39A-207ENST00000482162 TBX10O75333 385 aa10.88□□□□□ -0.67
TMEM39A-207ENST00000482162 FGF18O76093 207 aa10.88□□□□□ -0.67
TMEM39A-207ENST00000482162 BAG4O95429 457 aaKnown RBP10.88□□□□□ -0.67
TMEM39A-207ENST00000482162 IL9P15248 144 aa10.88□□□□□ -0.67
TMEM39A-207ENST00000482162 LAG3P18627 525 aa10.88□□□□□ -0.67
TMEM39A-207ENST00000482162 FGFR4P22455 802 aa10.88□□□□□ -0.67
TMEM39A-207ENST00000482162 HOXA11P31270 313 aaPredicted RBP10.88□□□□□ -0.67
TMEM39A-207ENST00000482162 YWHABP31946 246 aaKnown RBP10.88□□□□□ -0.67
TMEM39A-207ENST00000482162 GTF2F1P35269 517 aaKnown RBP eCLIP10.88□□□□□ -0.67
TMEM39A-207ENST00000482162 PHKA2P46019 1235 aa10.88□□□□□ -0.67
TMEM39A-207ENST00000482162 RBM25P49756 843 aaKnown RBP10.88□□□□□ -0.67
TMEM39A-207ENST00000482162 POU5F1BQ06416 359 aa10.88□□□□□ -0.67
TMEM39A-207ENST00000482162 SMAD2Q15796 467 aaKnown RBP10.88□□□□□ -0.67
TMEM39A-207ENST00000482162 C8orf34Q49A92 452 aa10.88□□□□□ -0.67
TMEM39A-207ENST00000482162 TMEM184AQ6ZMB5 413 aa10.88□□□□□ -0.67
TMEM39A-207ENST00000482162 OTUD6AQ7L8S5 288 aa10.88□□□□□ -0.67
TMEM39A-207ENST00000482162 MRPL10Q7Z7H8 261 aaKnown RBP10.88□□□□□ -0.67
TMEM39A-207ENST00000482162 ADGRD2Q7Z7M1 963 aa10.88□□□□□ -0.67
TMEM39A-207ENST00000482162 IFNLR1Q8IU57 520 aaPredicted RBP10.88□□□□□ -0.67
TMEM39A-207ENST00000482162 KSR1Q8IVT5 923 aa10.88□□□□□ -0.67
TMEM39A-207ENST00000482162 PRPF31Q8WWY3 499 aaKnown RBP10.88□□□□□ -0.67
TMEM39A-207ENST00000482162 NLRP7Q8WX94 980 aa10.88□□□□□ -0.67
TMEM39A-207ENST00000482162 SLC7A3Q8WY07 619 aa10.88□□□□□ -0.67
TMEM39A-207ENST00000482162 CEP170P1Q96L14 293 aa10.88□□□□□ -0.67
TMEM39A-207ENST00000482162 LXNQ9BS40 222 aa10.88□□□□□ -0.67
TMEM39A-207ENST00000482162 EPHX3Q9H6B9 360 aa10.88□□□□□ -0.67
TMEM39A-207ENST00000482162 BRMS1Q9HCU9 246 aa10.88□□□□□ -0.67
TMEM39A-207ENST00000482162 ANKEF1Q9NU02 776 aa10.88□□□□□ -0.67
TMEM39A-207ENST00000482162 CLEC1BQ9P126 229 aa10.88□□□□□ -0.67
TMEM39A-207ENST00000482162 PRKAG3Q9UGI9 489 aa10.88□□□□□ -0.67
TMEM39A-207ENST00000482162 KIAA1671Q9BY89 1806 aa10.87□□□□□ -0.67
TMEM39A-207ENST00000482162 LINC01565O15544 149 aa10.87□□□□□ -0.67
TMEM39A-207ENST00000482162 GLP2RO95838 553 aa10.87□□□□□ -0.67
TMEM39A-207ENST00000482162 ERVFC1P60507 584 aa10.87□□□□□ -0.67
TMEM39A-207ENST00000482162 ZP2Q05996 745 aa10.87□□□□□ -0.67
TMEM39A-207ENST00000482162 LAMTOR4Q0VGL1 99 aa10.87□□□□□ -0.67
TMEM39A-207ENST00000482162 COASYQ13057 564 aa10.87□□□□□ -0.67
TMEM39A-207ENST00000482162 KCNT2Q6UVM3 1135 aa10.87□□□□□ -0.67
TMEM39A-207ENST00000482162 SRGAP1Q7Z6B7 1085 aa10.87□□□□□ -0.67
TMEM39A-207ENST00000482162 FERMT3Q86UX7 667 aa10.87□□□□□ -0.67
TMEM39A-207ENST00000482162 RHPN2Q8IUC4 686 aa10.87□□□□□ -0.67
TMEM39A-207ENST00000482162 GJD3Q8N144 294 aa10.87□□□□□ -0.67
TMEM39A-207ENST00000482162 FBXO18Q8NFZ0 1043 aa10.87□□□□□ -0.67
TMEM39A-207ENST00000482162 PSPC1Q8WXF1 523 aaKnown RBP10.87□□□□□ -0.67
TMEM39A-207ENST00000482162 DYDC2Q96IM9 177 aa10.87□□□□□ -0.67
TMEM39A-207ENST00000482162 ZSCAN31Q96LW9 406 aaPredicted RBP10.87□□□□□ -0.67
TMEM39A-207ENST00000482162 EIF2AK1Q9BQI3 630 aaKnown RBP10.87□□□□□ -0.67
TMEM39A-207ENST00000482162 C1QTNF1Q9BXJ1 281 aa10.87□□□□□ -0.67
TMEM39A-207ENST00000482162 TMEM60Q9H2L4 133 aa10.87□□□□□ -0.67
TMEM39A-207ENST00000482162 TTC12Q9H892 705 aaPredicted RBP10.87□□□□□ -0.67
TMEM39A-207ENST00000482162 MINDY3Q9H8M7 445 aa10.87□□□□□ -0.67
TMEM39A-207ENST00000482162 XPNPEP1Q9NQW7 623 aa10.87□□□□□ -0.67
TMEM39A-207ENST00000482162 AGPAT5Q9NUQ2 364 aa10.87□□□□□ -0.67
TMEM39A-207ENST00000482162 CLDND1Q9NY35 253 aa10.87□□□□□ -0.67
TMEM39A-207ENST00000482162 COL4A3BPQ9Y5P4 624 aa10.87□□□□□ -0.67
TMEM39A-207ENST00000482162 MBTPS2O43462 519 aa10.86□□□□□ -0.67
TMEM39A-207ENST00000482162 NEMFO60524 1076 aa10.86□□□□□ -0.67
TMEM39A-207ENST00000482162 SPATA31C1P0DKV0 1188 aa10.86□□□□□ -0.67
TMEM39A-207ENST00000482162 SKIP12755 728 aa10.86□□□□□ -0.67
TMEM39A-207ENST00000482162 SFPQP23246 707 aaKnown RBP eCLIP10.86□□□□□ -0.67
TMEM39A-207ENST00000482162 ARL2P36404 184 aa10.86□□□□□ -0.67
TMEM39A-207ENST00000482162 ORC2Q13416 577 aaPredicted RBP10.86□□□□□ -0.67
TMEM39A-207ENST00000482162 SMAD4Q13485 552 aaKnown RBP10.86□□□□□ -0.67
TMEM39A-207ENST00000482162 CTTNQ14247 550 aaKnown RBP10.86□□□□□ -0.67
TMEM39A-207ENST00000482162 PCBP1Q15365 356 aaKnown RBP eCLIP10.86□□□□□ -0.67
TMEM39A-207ENST00000482162 CALCRLQ16602 461 aa10.86□□□□□ -0.67
TMEM39A-207ENST00000482162 DUSP6Q16828 381 aa10.86□□□□□ -0.67
TMEM39A-207ENST00000482162 UBXN11Q5T124 520 aa10.86□□□□□ -0.67
TMEM39A-207ENST00000482162 NCAPH2Q6IBW4 605 aa10.86□□□□□ -0.67
TMEM39A-207ENST00000482162 TPH2Q8IWU9 490 aa10.86□□□□□ -0.67
TMEM39A-207ENST00000482162 ADHFE1Q8IWW8 467 aa10.86□□□□□ -0.67
TMEM39A-207ENST00000482162 SLC39A11Q8N1S5 342 aa10.86□□□□□ -0.67
TMEM39A-207ENST00000482162 LRRC43Q8N309 656 aa10.86□□□□□ -0.67
TMEM39A-207ENST00000482162 TCP11Q8WWU5 503 aa10.86□□□□□ -0.67
TMEM39A-207ENST00000482162 MRPS27Q92552 414 aaKnown RBP10.86□□□□□ -0.67
TMEM39A-207ENST00000482162 PPP2R3CQ969Q6 453 aa10.86□□□□□ -0.67
TMEM39A-207ENST00000482162 TMEM143Q96AN5 459 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms