RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 SNUPNO95149 360 aaKnown RBP7.62□□□□□ -1.19
SF3B1-210ENST00000482158 SCGB1D2O95969 90 aa7.62□□□□□ -1.19
SF3B1-210ENST00000482158 C5AR1P21730 350 aa7.62□□□□□ -1.19
SF3B1-210ENST00000482158 CCND1P24385 295 aa7.62□□□□□ -1.19
SF3B1-210ENST00000482158 POLD1P28340 1107 aa7.62□□□□□ -1.19
SF3B1-210ENST00000482158 PPARAQ07869 468 aa7.62□□□□□ -1.19
SF3B1-210ENST00000482158 PPP2R5AQ15172 486 aa7.62□□□□□ -1.19
SF3B1-210ENST00000482158 KCNA10Q16322 511 aa7.62□□□□□ -1.19
SF3B1-210ENST00000482158 DGKDQ16760 1214 aa7.62□□□□□ -1.19
SF3B1-210ENST00000482158 ZNF385BQ569K4 471 aa7.62□□□□□ -1.19
SF3B1-210ENST00000482158 CDYL2Q8N8U2 506 aa7.62□□□□□ -1.19
SF3B1-210ENST00000482158 OR14C36Q8NHC7 312 aa7.62□□□□□ -1.19
SF3B1-210ENST00000482158 AUTS2Q8WXX7 1259 aa7.62□□□□□ -1.19
SF3B1-210ENST00000482158 NKD2Q969F2 451 aaPredicted RBP7.62□□□□□ -1.19
SF3B1-210ENST00000482158 CAMKK2Q96RR4 588 aa7.62□□□□□ -1.19
SF3B1-210ENST00000482158 SLC38A3Q99624 504 aa7.62□□□□□ -1.19
SF3B1-210ENST00000482158 TUBD1Q9UJT1 453 aa7.62□□□□□ -1.19
SF3B1-210ENST00000482158 FBXO10Q9UK96 956 aa7.62□□□□□ -1.19
SF3B1-210ENST00000482158 NPIPB6E9PJ23 425 aa7.61□□□□□ -1.19
SF3B1-210ENST00000482158 PAX4O43316 350 aa7.61□□□□□ -1.19
SF3B1-210ENST00000482158 SEC24DO94855 1032 aaPredicted RBP7.61□□□□□ -1.19
SF3B1-210ENST00000482158 ZSCAN20P17040 1043 aaPredicted RBP7.61□□□□□ -1.19
SF3B1-210ENST00000482158 GPR15P49685 360 aa7.61□□□□□ -1.19
SF3B1-210ENST00000482158 CDK17Q00537 523 aa7.61□□□□□ -1.19
SF3B1-210ENST00000482158 ACAP2Q15057 778 aa7.61□□□□□ -1.19
SF3B1-210ENST00000482158 TRIM68Q6AZZ1 485 aa7.61□□□□□ -1.19
SF3B1-210ENST00000482158 LARP4Q71RC2 724 aaKnown RBP eCLIP7.61□□□□□ -1.19
SF3B1-210ENST00000482158 OTOP2Q7RTS6 562 aa7.61□□□□□ -1.19
SF3B1-210ENST00000482158 SSH1Q8WYL5 1049 aa7.61□□□□□ -1.19
SF3B1-210ENST00000482158 DYDC2Q96IM9 177 aa7.61□□□□□ -1.19
SF3B1-210ENST00000482158 IFT122Q9HBG6 1241 aa7.61□□□□□ -1.19
SF3B1-210ENST00000482158 NTMQ9P121 344 aa7.61□□□□□ -1.19
SF3B1-210ENST00000482158 TCEAL9Q9UHQ7 104 aa7.61□□□□□ -1.19
SF3B1-210ENST00000482158 ZNF180Q9UJW8 692 aa7.61□□□□□ -1.19
SF3B1-210ENST00000482158 MRFAP1Q9Y605 127 aa7.61□□□□□ -1.19
SF3B1-210ENST00000482158 RFPL1O75677 317 aa7.6□□□□□ -1.19
SF3B1-210ENST00000482158 MTHFD2P13995 350 aa7.6□□□□□ -1.19
SF3B1-210ENST00000482158 STAT5BP51692 787 aa7.6□□□□□ -1.19
SF3B1-210ENST00000482158 KCNQ1P51787 676 aa7.6□□□□□ -1.19
SF3B1-210ENST00000482158 AFF3P51826 1226 aaKnown RBP7.6□□□□□ -1.19
SF3B1-210ENST00000482158 MAP3K12Q12852 859 aa7.6□□□□□ -1.19
SF3B1-210ENST00000482158 SPIDRQ14159 915 aa7.6□□□□□ -1.19
SF3B1-210ENST00000482158 VMACQ2NL98 169 aa7.6□□□□□ -1.19
SF3B1-210ENST00000482158 Q6ZUG5 572 aa7.6□□□□□ -1.19
SF3B1-210ENST00000482158 CARFQ8N187 725 aa7.6□□□□□ -1.19
SF3B1-210ENST00000482158 JPH3Q8WXH2 748 aaPredicted RBP7.6□□□□□ -1.19
SF3B1-210ENST00000482158 HIST1H2AHQ96KK5 128 aa7.6□□□□□ -1.19
SF3B1-210ENST00000482158 HIST1H2AJQ99878 128 aa7.6□□□□□ -1.19
SF3B1-210ENST00000482158 KATNBL1Q9H079 304 aa7.6□□□□□ -1.19
SF3B1-210ENST00000482158 L2HGDHQ9H9P8 463 aa7.6□□□□□ -1.19
SF3B1-210ENST00000482158 LUC7LQ9NQ29 371 aaKnown RBP7.6□□□□□ -1.19
SF3B1-210ENST00000482158 POLR3BQ9NW08 1133 aaPredicted RBP7.6□□□□□ -1.19
SF3B1-210ENST00000482158 SAE1Q9UBE0 346 aaPredicted RBP7.6□□□□□ -1.19
SF3B1-210ENST00000482158 INVSQ9Y283 1065 aa7.6□□□□□ -1.19
SF3B1-210ENST00000482158 RFXAPO00287 272 aa7.59□□□□□ -1.19
SF3B1-210ENST00000482158 PRPF3O43395 683 aaKnown RBP7.59□□□□□ -1.19
SF3B1-210ENST00000482158 ETV4P43268 484 aa7.59□□□□□ -1.19
SF3B1-210ENST00000482158 RAP1GAPP47736 663 aa7.59□□□□□ -1.19
SF3B1-210ENST00000482158 SARSP49591 514 aaKnown RBP7.59□□□□□ -1.19
SF3B1-210ENST00000482158 CCT2P78371 535 aaKnown RBP7.59□□□□□ -1.19
SF3B1-210ENST00000482158 CCDC178Q5BJE1 867 aa7.59□□□□□ -1.19
SF3B1-210ENST00000482158 EFCAB2Q5VUJ9 269 aa7.59□□□□□ -1.19
SF3B1-210ENST00000482158 MCTP2Q6DN12 878 aa7.59□□□□□ -1.19
SF3B1-210ENST00000482158 TXNDC5Q8NBS9 432 aaKnown RBP7.59□□□□□ -1.19
SF3B1-210ENST00000482158 AJUBAQ96IF1 538 aa7.59□□□□□ -1.19
SF3B1-210ENST00000482158 DNAI1Q9UI46 699 aa7.59□□□□□ -1.19
SF3B1-210ENST00000482158 SCOCQ9UIL1 159 aa7.59□□□□□ -1.19
SF3B1-210ENST00000482158 MAFGO15525 162 aa7.58□□□□□ -1.2
SF3B1-210ENST00000482158 NDUFS2O75306 463 aa7.58□□□□□ -1.2
SF3B1-210ENST00000482158 HNRNPLP14866 589 aaKnown RBP eCLIP7.58□□□□□ -1.2
SF3B1-210ENST00000482158 ZNF124Q15973 351 aa7.58□□□□□ -1.2
SF3B1-210ENST00000482158 ADRM1Q16186 407 aa7.58□□□□□ -1.2
SF3B1-210ENST00000482158 MBNL2Q5VZF2 373 aaKnown RBP7.58□□□□□ -1.2
SF3B1-210ENST00000482158 CHPFQ8IZ52 775 aa7.58□□□□□ -1.2
SF3B1-210ENST00000482158 LINC01356Q8N9X3 169 aa7.58□□□□□ -1.2
SF3B1-210ENST00000482158 ADAMTS17Q8TE56 1095 aa7.58□□□□□ -1.2
SF3B1-210ENST00000482158 MBD6Q96DN6 1003 aa7.58□□□□□ -1.2
SF3B1-210ENST00000482158 ADAMTS20P59510 1910 aa7.57□□□□□ -1.2
SF3B1-210ENST00000482158 PF4V1P10720 104 aa7.57□□□□□ -1.2
SF3B1-210ENST00000482158 CSF2RBP32927 897 aa7.57□□□□□ -1.2
SF3B1-210ENST00000482158 SLC5A3P53794 718 aa7.57□□□□□ -1.2
SF3B1-210ENST00000482158 CD69Q07108 199 aa7.57□□□□□ -1.2
SF3B1-210ENST00000482158 ZNF827Q17R98 1081 aa7.57□□□□□ -1.2
SF3B1-210ENST00000482158 ANO4Q32M45 955 aa7.57□□□□□ -1.2
SF3B1-210ENST00000482158 ZNF761Q86XN6 746 aaPredicted RBP7.57□□□□□ -1.2
SF3B1-210ENST00000482158 TPH2Q8IWU9 490 aa7.57□□□□□ -1.2
SF3B1-210ENST00000482158 ACE2Q9BYF1 805 aaPredicted RBP7.57□□□□□ -1.2
SF3B1-210ENST00000482158 OSBPL6Q9BZF3 934 aa7.57□□□□□ -1.2
SF3B1-210ENST00000482158 TMEM168Q9H0V1 697 aa7.57□□□□□ -1.2
SF3B1-210ENST00000482158 SERPINB13Q9UIV8 391 aa7.57□□□□□ -1.2
SF3B1-210ENST00000482158 ANKRD6Q9Y2G4 727 aa7.57□□□□□ -1.2
SF3B1-210ENST00000482158 PTPN22Q9Y2R2 807 aa7.57□□□□□ -1.2
SF3B1-210ENST00000482158 GIT1Q9Y2X7 761 aa7.57□□□□□ -1.2
SF3B1-210ENST00000482158 A0A1W2PR48 441 aa7.56□□□□□ -1.2
SF3B1-210ENST00000482158 HMGCRP04035 888 aa7.56□□□□□ -1.2
SF3B1-210ENST00000482158 ZNF888P0CJ79 500 aaPredicted RBP7.56□□□□□ -1.2
SF3B1-210ENST00000482158 FAM26FQ5R3K3 315 aa7.56□□□□□ -1.2
SF3B1-210ENST00000482158 FAM102BQ5T8I3 360 aa7.56□□□□□ -1.2
SF3B1-210ENST00000482158 REXO1L1PQ8IX06 675 aa7.56□□□□□ -1.2
SF3B1-210ENST00000482158 PPM1NQ8N819 430 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms