RNA–Protein interactions for RNA: ENST00000481474.5

TRIM27-205, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best)

Gene TRIM27, Length 7,006 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-205ENST00000481474 FEN1P39748 380 aaKnown RBP12.32□□□□□ -0.44
TRIM27-205ENST00000481474 ALDH1A3P47895 512 aa12.32□□□□□ -0.44
TRIM27-205ENST00000481474 MRPL28Q13084 256 aaKnown RBP12.32□□□□□ -0.44
TRIM27-205ENST00000481474 TAF1BQ53T94 588 aaPredicted RBP12.32□□□□□ -0.44
TRIM27-205ENST00000481474 FAM217BQ9NTX9 383 aaPredicted RBP12.32□□□□□ -0.44
TRIM27-205ENST00000481474 MCF2P10911 925 aa12.32□□□□□ -0.44
TRIM27-205ENST00000481474 AARSP49588 968 aaKnown RBP eCLIP12.32□□□□□ -0.44
TRIM27-205ENST00000481474 MDH1BQ5I0G3 518 aa12.32□□□□□ -0.44
TRIM27-205ENST00000481474 USP17L2Q6R6M4 530 aa12.32□□□□□ -0.44
TRIM27-205ENST00000481474 SYTL1Q8IYJ3 562 aa12.32□□□□□ -0.44
TRIM27-205ENST00000481474 NLGN1Q8N2Q7 840 aa12.32□□□□□ -0.44
TRIM27-205ENST00000481474 DDX28Q9NUL7 540 aaKnown RBP12.32□□□□□ -0.44
TRIM27-205ENST00000481474 CHURC1-FNTBB4DL54 471 aa12.32□□□□□ -0.44
TRIM27-205ENST00000481474 EIF4A2Q14240 407 aaKnown RBP12.32□□□□□ -0.44
TRIM27-205ENST00000481474 OPTNQ96CV9 577 aa12.32□□□□□ -0.44
TRIM27-205ENST00000481474 CLMNQ96JQ2 1002 aa12.32□□□□□ -0.44
TRIM27-205ENST00000481474 COL4A3BPQ9Y5P4 624 aa12.32□□□□□ -0.44
TRIM27-205ENST00000481474 TLR2O60603 784 aa12.32□□□□□ -0.44
TRIM27-205ENST00000481474 RANBP1P43487 201 aa12.32□□□□□ -0.44
TRIM27-205ENST00000481474 RC3H1Q5TC82 1133 aaKnown RBP12.32□□□□□ -0.44
TRIM27-205ENST00000481474 DDI2Q5TDH0 399 aa12.32□□□□□ -0.44
TRIM27-205ENST00000481474 ERICH1Q86X53 443 aa12.32□□□□□ -0.44
TRIM27-205ENST00000481474 BLIDQ8IZY5 108 aa12.32□□□□□ -0.44
TRIM27-205ENST00000481474 SLC25A41Q8N5S1 370 aa12.32□□□□□ -0.44
TRIM27-205ENST00000481474 USP6NLQ92738 828 aa12.32□□□□□ -0.44
TRIM27-205ENST00000481474 NRBF2Q96F24 287 aa12.32□□□□□ -0.44
TRIM27-205ENST00000481474 PRIMPOLQ96LW4 560 aa12.32□□□□□ -0.44
TRIM27-205ENST00000481474 EFHD1Q9BUP0 239 aa12.32□□□□□ -0.44
TRIM27-205ENST00000481474 TYW1Q9NV66 732 aaKnown RBP12.32□□□□□ -0.44
TRIM27-205ENST00000481474 EYA2O00167 538 aa12.32□□□□□ -0.44
TRIM27-205ENST00000481474 OAS2P29728 719 aaKnown RBP12.32□□□□□ -0.44
TRIM27-205ENST00000481474 CTSWP56202 376 aa12.32□□□□□ -0.44
TRIM27-205ENST00000481474 FASTKD1Q53R41 847 aaKnown RBP12.32□□□□□ -0.44
TRIM27-205ENST00000481474 LLGL2Q6P1M3 1020 aa12.32□□□□□ -0.44
TRIM27-205ENST00000481474 C16orf87Q6PH81 154 aa12.32□□□□□ -0.44
TRIM27-205ENST00000481474 SH3TC2Q8TF17 1288 aa12.32□□□□□ -0.44
TRIM27-205ENST00000481474 COQ6Q9Y2Z9 468 aa12.32□□□□□ -0.44
TRIM27-205ENST00000481474 ZNF711Q9Y462 761 aa12.32□□□□□ -0.44
TRIM27-205ENST00000481474 PCDHGA3Q9Y5H0 932 aa12.32□□□□□ -0.44
TRIM27-205ENST00000481474 KCNJ18B7U540 433 aa12.31□□□□□ -0.44
TRIM27-205ENST00000481474 DYNC1LI2O43237 492 aaPredicted RBP12.31□□□□□ -0.44
TRIM27-205ENST00000481474 PDGFRBP09619 1106 aa12.31□□□□□ -0.44
TRIM27-205ENST00000481474 MRPS25P82663 173 aaKnown RBP12.31□□□□□ -0.44
TRIM27-205ENST00000481474 KCNJ12Q14500 433 aa12.31□□□□□ -0.44
TRIM27-205ENST00000481474 SNRNP48Q6IEG0 339 aaKnown RBP12.31□□□□□ -0.44
TRIM27-205ENST00000481474 SLC25A24Q6NUK1 477 aa12.31□□□□□ -0.44
TRIM27-205ENST00000481474 TTC8Q8TAM2 541 aa12.31□□□□□ -0.44
TRIM27-205ENST00000481474 FAM136AQ96C01 138 aa12.31□□□□□ -0.44
TRIM27-205ENST00000481474 DNAJC1Q96KC8 554 aaKnown RBP12.31□□□□□ -0.44
TRIM27-205ENST00000481474 PPP1R13BQ96KQ4 1090 aa12.31□□□□□ -0.44
TRIM27-205ENST00000481474 ADAM21Q9UKJ8 722 aa12.31□□□□□ -0.44
TRIM27-205ENST00000481474 USP17L3A6NCW0 530 aa12.31□□□□□ -0.44
TRIM27-205ENST00000481474 USP17L4A6NCW7 530 aa12.31□□□□□ -0.44
TRIM27-205ENST00000481474 PYGMP11217 842 aa12.31□□□□□ -0.44
TRIM27-205ENST00000481474 MLNP12872 115 aa12.31□□□□□ -0.44
TRIM27-205ENST00000481474 MORC3Q14149 939 aa12.31□□□□□ -0.44
TRIM27-205ENST00000481474 USP17L1Q7RTZ2 530 aa12.31□□□□□ -0.44
TRIM27-205ENST00000481474 CLYBLQ8N0X4 340 aa12.31□□□□□ -0.44
TRIM27-205ENST00000481474 PARVGQ9HBI0 331 aa12.31□□□□□ -0.44
TRIM27-205ENST00000481474 POLR1DQ9Y2S0 133 aa12.31□□□□□ -0.44
TRIM27-205ENST00000481474 DHX29Q7Z478 1369 aaKnown RBP12.31□□□□□ -0.44
TRIM27-205ENST00000481474 H0YCG3 227 aa12.31□□□□□ -0.44
TRIM27-205ENST00000481474 SCNN1AP37088 669 aa12.31□□□□□ -0.44
TRIM27-205ENST00000481474 MKRN4PQ13434 485 aaPredicted RBP12.31□□□□□ -0.44
TRIM27-205ENST00000481474 CEP78Q5JTW2 689 aa12.31□□□□□ -0.44
TRIM27-205ENST00000481474 KDM2BQ8NHM5 1336 aa12.31□□□□□ -0.44
TRIM27-205ENST00000481474 VPS39Q96JC1 886 aa12.31□□□□□ -0.44
TRIM27-205ENST00000481474 ZSCAN10Q96SZ4 725 aaPredicted RBP12.31□□□□□ -0.44
TRIM27-205ENST00000481474 PACSIN2Q9UNF0 486 aaPredicted RBP12.31□□□□□ -0.44
TRIM27-205ENST00000481474 SUPT3HO75486 399 aa12.31□□□□□ -0.44
TRIM27-205ENST00000481474 YWHAQP27348 245 aa12.31□□□□□ -0.44
TRIM27-205ENST00000481474 HMOX2P30519 316 aa12.31□□□□□ -0.44
TRIM27-205ENST00000481474 SERPINB4P48594 390 aa12.31□□□□□ -0.44
TRIM27-205ENST00000481474 CHRNDQ07001 517 aa12.31□□□□□ -0.44
TRIM27-205ENST00000481474 ARHGAP17Q68EM7 881 aa12.31□□□□□ -0.44
TRIM27-205ENST00000481474 KIF12Q96FN5 646 aa12.31□□□□□ -0.44
TRIM27-205ENST00000481474 ACCSQ96QU6 501 aa12.31□□□□□ -0.44
TRIM27-205ENST00000481474 TDRD3Q9H7E2 651 aaKnown RBP12.31□□□□□ -0.44
TRIM27-205ENST00000481474 NFE2L3Q9Y4A8 694 aa12.31□□□□□ -0.44
TRIM27-205ENST00000481474 FCER1AP12319 257 aa12.31□□□□□ -0.44
TRIM27-205ENST00000481474 ZNF438Q7Z4V0 828 aa12.31□□□□□ -0.44
TRIM27-205ENST00000481474 IQCF2Q8IXL9 164 aa12.31□□□□□ -0.44
TRIM27-205ENST00000481474 ADAM33Q9BZ11 813 aa12.31□□□□□ -0.44
TRIM27-205ENST00000481474 LSG1Q9H089 658 aaKnown RBP12.31□□□□□ -0.44
TRIM27-205ENST00000481474 ATP8A1Q9Y2Q0 1164 aa12.31□□□□□ -0.44
TRIM27-205ENST00000481474 E9PMD0 336 aa12.31□□□□□ -0.44
TRIM27-205ENST00000481474 JAK2O60674 1132 aa12.31□□□□□ -0.44
TRIM27-205ENST00000481474 ITGAXP20702 1163 aa12.31□□□□□ -0.44
TRIM27-205ENST00000481474 KRT20P35900 424 aa12.31□□□□□ -0.44
TRIM27-205ENST00000481474 PLTPP55058 493 aa12.31□□□□□ -0.44
TRIM27-205ENST00000481474 FAM83BQ5T0W9 1011 aa12.31□□□□□ -0.44
TRIM27-205ENST00000481474 ZNF274Q96GC6 653 aaPredicted RBP12.31□□□□□ -0.44
TRIM27-205ENST00000481474 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.3□□□□□ -0.44
TRIM27-205ENST00000481474 NUP62P37198 522 aaPredicted RBP12.3□□□□□ -0.44
TRIM27-205ENST00000481474 HUNKP57058 714 aa12.3□□□□□ -0.44
TRIM27-205ENST00000481474 GRAMD4Q6IC98 578 aa12.3□□□□□ -0.44
TRIM27-205ENST00000481474 PLBD2Q8NHP8 589 aa12.3□□□□□ -0.44
TRIM27-205ENST00000481474 TUBGCP3Q96CW5 907 aa12.3□□□□□ -0.44
TRIM27-205ENST00000481474 SLAIN2Q9P270 581 aa12.3□□□□□ -0.44
TRIM27-205ENST00000481474 ABCB11O95342 1321 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms