RNA–Protein interactions for RNA: ENST00000480835.1

SNRNP200-205, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 540 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-205ENST00000480835 UPF3AQ9H1J1 476 aaKnown RBP16.28■□□□□ 0.2
SNRNP200-205ENST00000480835 RNPEPQ9H4A4 650 aa16.28■□□□□ 0.2
SNRNP200-205ENST00000480835 SPC25Q9HBM1 224 aa16.28■□□□□ 0.2
SNRNP200-205ENST00000480835 SIP14410 1827 aa16.28■□□□□ 0.2
SNRNP200-205ENST00000480835 PHLPP2Q6ZVD8 1323 aa16.27■□□□□ 0.2
SNRNP200-205ENST00000480835 RRN3P2A6NIE6 340 aa16.27■□□□□ 0.2
SNRNP200-205ENST00000480835 ASAP2O43150 1006 aa16.27■□□□□ 0.2
SNRNP200-205ENST00000480835 F2P00734 622 aa16.27■□□□□ 0.2
SNRNP200-205ENST00000480835 INSRRP14616 1297 aa16.27■□□□□ 0.2
SNRNP200-205ENST00000480835 HSPA6P17066 643 aa16.27■□□□□ 0.2
SNRNP200-205ENST00000480835 DNM2P50570 870 aa16.27■□□□□ 0.2
SNRNP200-205ENST00000480835 COPB1P53618 953 aaKnown RBP16.27■□□□□ 0.2
SNRNP200-205ENST00000480835 GJA9P57773 515 aa16.27■□□□□ 0.2
SNRNP200-205ENST00000480835 CACNB2Q08289 660 aaPredicted RBP16.27■□□□□ 0.2
SNRNP200-205ENST00000480835 MXD4Q14582 209 aaPredicted RBP16.27■□□□□ 0.2
SNRNP200-205ENST00000480835 KRT31Q15323 416 aa16.27■□□□□ 0.2
SNRNP200-205ENST00000480835 DRC7Q8IY82 874 aa16.27■□□□□ 0.2
SNRNP200-205ENST00000480835 SYCP3Q8IZU3 236 aa16.27■□□□□ 0.2
SNRNP200-205ENST00000480835 RAET1EQ8TD07 263 aa16.27■□□□□ 0.2
SNRNP200-205ENST00000480835 TMEM174Q8WUU8 243 aa16.27■□□□□ 0.2
SNRNP200-205ENST00000480835 PSPC1Q8WXF1 523 aaKnown RBP16.27■□□□□ 0.2
SNRNP200-205ENST00000480835 BSNDQ8WZ55 320 aa16.27■□□□□ 0.2
SNRNP200-205ENST00000480835 TMEM143Q96AN5 459 aa16.27■□□□□ 0.2
SNRNP200-205ENST00000480835 CNOT6LQ96LI5 555 aaKnown RBP16.27■□□□□ 0.2
SNRNP200-205ENST00000480835 KATNAL1Q9BW62 490 aa16.27■□□□□ 0.2
SNRNP200-205ENST00000480835 ARHGAP28Q9P2N2 729 aa16.27■□□□□ 0.2
SNRNP200-205ENST00000480835 ZMYM2Q9UBW7 1377 aa16.26■□□□□ 0.19
SNRNP200-205ENST00000480835 TGFB1I1O43294 461 aa16.26■□□□□ 0.19
SNRNP200-205ENST00000480835 ZEB2O60315 1214 aa16.26■□□□□ 0.19
SNRNP200-205ENST00000480835 C22orf31O95567 290 aa16.26■□□□□ 0.19
SNRNP200-205ENST00000480835 RARBP10826 455 aa16.26■□□□□ 0.19
SNRNP200-205ENST00000480835 GLRA2P23416 452 aa16.26■□□□□ 0.19
SNRNP200-205ENST00000480835 MTIF2P46199 727 aaKnown RBP16.26■□□□□ 0.19
SNRNP200-205ENST00000480835 MARSP56192 900 aaKnown RBP16.26■□□□□ 0.19
SNRNP200-205ENST00000480835 SOX10P56693 466 aa16.26■□□□□ 0.19
SNRNP200-205ENST00000480835 ADAM9Q13443 819 aa16.26■□□□□ 0.19
SNRNP200-205ENST00000480835 NR1I3Q14994 352 aa16.26■□□□□ 0.19
SNRNP200-205ENST00000480835 FSCN1Q16658 493 aaKnown RBP16.26■□□□□ 0.19
SNRNP200-205ENST00000480835 SLC9A9Q8IVB4 645 aa16.26■□□□□ 0.19
SNRNP200-205ENST00000480835 MAP4K3Q8IVH8 894 aa16.26■□□□□ 0.19
SNRNP200-205ENST00000480835 C12orf56Q8IXR9 622 aa16.26■□□□□ 0.19
SNRNP200-205ENST00000480835 ASAP3Q8TDY4 903 aa16.26■□□□□ 0.19
SNRNP200-205ENST00000480835 ZNF296Q8WUU4 475 aaPredicted RBP16.26■□□□□ 0.19
SNRNP200-205ENST00000480835 DENND3A2RUS2 1198 aa16.25■□□□□ 0.19
SNRNP200-205ENST00000480835 HAS3O00219 553 aa16.25■□□□□ 0.19
SNRNP200-205ENST00000480835 N4BP3O15049 544 aa16.25■□□□□ 0.19
SNRNP200-205ENST00000480835 SLC16A3O15427 465 aaKnown RBP16.25■□□□□ 0.19
SNRNP200-205ENST00000480835 NR3C1P04150 777 aa16.25■□□□□ 0.19
SNRNP200-205ENST00000480835 PTMAP06454 111 aaKnown RBP16.25■□□□□ 0.19
SNRNP200-205ENST00000480835 PRKAR2AP13861 404 aaKnown RBP16.25■□□□□ 0.19
SNRNP200-205ENST00000480835 NR2F2P24468 414 aa16.25■□□□□ 0.19
SNRNP200-205ENST00000480835 CNGA1P29973 690 aa16.25■□□□□ 0.19
SNRNP200-205ENST00000480835 KCNA1Q09470 495 aa16.25■□□□□ 0.19
SNRNP200-205ENST00000480835 PPFIA1Q13136 1202 aa16.25■□□□□ 0.19
SNRNP200-205ENST00000480835 TFDP1Q14186 410 aa16.25■□□□□ 0.19
SNRNP200-205ENST00000480835 MAP3K21Q5TCX8 1036 aa16.25■□□□□ 0.19
SNRNP200-205ENST00000480835 SLAIN1Q8ND83 568 aa16.25■□□□□ 0.19
SNRNP200-205ENST00000480835 DEPTORQ8TB45 409 aa16.25■□□□□ 0.19
SNRNP200-205ENST00000480835 LENG1Q96BZ8 264 aaPredicted RBP16.25■□□□□ 0.19
SNRNP200-205ENST00000480835 NAP1L5Q96NT1 182 aaPredicted RBP16.25■□□□□ 0.19
SNRNP200-205ENST00000480835 TUBGCP2Q9BSJ2 902 aa16.25■□□□□ 0.19
SNRNP200-205ENST00000480835 MKNK1Q9BUB5 465 aa16.25■□□□□ 0.19
SNRNP200-205ENST00000480835 TMEM134Q9H6X4 195 aa16.25■□□□□ 0.19
SNRNP200-205ENST00000480835 RTN4Q9NQC3 1192 aaKnown RBP16.25■□□□□ 0.19
SNRNP200-205ENST00000480835 IMPACTQ9P2X3 320 aa16.25■□□□□ 0.19
SNRNP200-205ENST00000480835 TBX20Q9UMR3 447 aa16.25■□□□□ 0.19
SNRNP200-205ENST00000480835 MYL3P08590 195 aa16.24■□□□□ 0.19
SNRNP200-205ENST00000480835 ELNP15502 786 aa16.24■□□□□ 0.19
SNRNP200-205ENST00000480835 KLRC1P26715 233 aa16.24■□□□□ 0.19
SNRNP200-205ENST00000480835 TMOD1P28289 359 aa16.24■□□□□ 0.19
SNRNP200-205ENST00000480835 PSEN2P49810 448 aa16.24■□□□□ 0.19
SNRNP200-205ENST00000480835 EFNA5P52803 228 aa16.24■□□□□ 0.19
SNRNP200-205ENST00000480835 MFSD10Q14728 455 aa16.24■□□□□ 0.19
SNRNP200-205ENST00000480835 GRIK4Q16099 956 aa16.24■□□□□ 0.19
SNRNP200-205ENST00000480835 CCDC40Q4G0X9 1142 aa16.24■□□□□ 0.19
SNRNP200-205ENST00000480835 HS1BP3Q53T59 392 aa16.24■□□□□ 0.19
SNRNP200-205ENST00000480835 EFCAB12Q6NXP0 572 aa16.24■□□□□ 0.19
SNRNP200-205ENST00000480835 FRMD5Q7Z6J6 570 aa16.24■□□□□ 0.19
SNRNP200-205ENST00000480835 CREBRFQ8IUR6 639 aa16.24■□□□□ 0.19
SNRNP200-205ENST00000480835 PRPF31Q8WWY3 499 aaKnown RBP16.24■□□□□ 0.19
SNRNP200-205ENST00000480835 KAT2BQ92831 832 aa16.24■□□□□ 0.19
SNRNP200-205ENST00000480835 C2orf40Q9H1Z8 148 aa16.24■□□□□ 0.19
SNRNP200-205ENST00000480835 SUGCTQ9HAC7 445 aa16.24■□□□□ 0.19
SNRNP200-205ENST00000480835 METTL14Q9HCE5 456 aaKnown RBP16.24■□□□□ 0.19
SNRNP200-205ENST00000480835 AGPAT3Q9NRZ7 376 aa16.24■□□□□ 0.19
SNRNP200-205ENST00000480835 DMAC2Q9NW81 257 aa16.24■□□□□ 0.19
SNRNP200-205ENST00000480835 TAB2Q9NYJ8 693 aa16.24■□□□□ 0.19
SNRNP200-205ENST00000480835 SUCLA2Q9P2R7 463 aaPredicted RBP16.24■□□□□ 0.19
SNRNP200-205ENST00000480835 NRCAMQ92823 1304 aa16.23■□□□□ 0.19
SNRNP200-205ENST00000480835 LRRIQ4A6NIV6 560 aa16.23■□□□□ 0.19
SNRNP200-205ENST00000480835 LGALS16A8MUM7 142 aa16.23■□□□□ 0.19
SNRNP200-205ENST00000480835 C6orf222P0C671 652 aaPredicted RBP16.23■□□□□ 0.19
SNRNP200-205ENST00000480835 EPB41P11171 864 aaKnown RBP16.23■□□□□ 0.19
SNRNP200-205ENST00000480835 PURAQ00577 322 aaKnown RBP16.23■□□□□ 0.19
SNRNP200-205ENST00000480835 PPP2R3AQ06190 1150 aa16.23■□□□□ 0.19
SNRNP200-205ENST00000480835 POU5F1BQ06416 359 aa16.23■□□□□ 0.19
SNRNP200-205ENST00000480835 LAMTOR4Q0VGL1 99 aa16.23■□□□□ 0.19
SNRNP200-205ENST00000480835 STRN3Q13033 797 aa16.23■□□□□ 0.19
SNRNP200-205ENST00000480835 TRIM32Q13049 653 aa16.23■□□□□ 0.19
SNRNP200-205ENST00000480835 MKRN4PQ13434 485 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms