RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 PHKA2P46019 1235 aa12.78□□□□□ -0.36
CCM2-213ENST00000480658 MCM2P49736 904 aa12.78□□□□□ -0.36
CCM2-213ENST00000480658 PLCB3Q01970 1234 aa12.78□□□□□ -0.36
CCM2-213ENST00000480658 POU5F1BQ06416 359 aa12.78□□□□□ -0.36
CCM2-213ENST00000480658 NR5A1Q13285 461 aa12.78□□□□□ -0.36
CCM2-213ENST00000480658 GIT2Q14161 759 aa12.78□□□□□ -0.36
CCM2-213ENST00000480658 RABEP1Q15276 862 aa12.78□□□□□ -0.36
CCM2-213ENST00000480658 CTC1Q2NKJ3 1217 aa12.78□□□□□ -0.36
CCM2-213ENST00000480658 PTCRAQ6ISU1 281 aaPredicted RBP12.78□□□□□ -0.36
CCM2-213ENST00000480658 GLB1LQ6UWU2 654 aa12.78□□□□□ -0.36
CCM2-213ENST00000480658 CATSPER4Q7RTX7 472 aa12.78□□□□□ -0.36
CCM2-213ENST00000480658 ECHDC2Q86YB7 292 aa12.78□□□□□ -0.36
CCM2-213ENST00000480658 HACE1Q8IYU2 909 aa12.78□□□□□ -0.36
CCM2-213ENST00000480658 KLHL23Q8NBE8 558 aa12.78□□□□□ -0.36
CCM2-213ENST00000480658 OXER1Q8TDS5 423 aa12.78□□□□□ -0.36
CCM2-213ENST00000480658 POF1BQ8WVV4 589 aa12.78□□□□□ -0.36
CCM2-213ENST00000480658 HAS1Q92839 578 aa12.78□□□□□ -0.36
CCM2-213ENST00000480658 NLRP4Q96MN2 994 aa12.78□□□□□ -0.36
CCM2-213ENST00000480658 ZNF558Q96NG5 402 aa12.78□□□□□ -0.36
CCM2-213ENST00000480658 PPP1R16BQ96T49 567 aa12.78□□□□□ -0.36
CCM2-213ENST00000480658 TTC12Q9H892 705 aaPredicted RBP12.78□□□□□ -0.36
CCM2-213ENST00000480658 NGRNQ9NPE2 291 aaKnown RBP12.78□□□□□ -0.36
CCM2-213ENST00000480658 PIN4Q9Y237 131 aaKnown RBP12.78□□□□□ -0.36
CCM2-213ENST00000480658 CNTNAP2Q9UHC6 1331 aa12.78□□□□□ -0.36
CCM2-213ENST00000480658 A0A087WZ62 844 aa12.77□□□□□ -0.37
CCM2-213ENST00000480658 BTBD18B2RXH4 712 aa12.77□□□□□ -0.37
CCM2-213ENST00000480658 GRM6O15303 877 aa12.77□□□□□ -0.37
CCM2-213ENST00000480658 FGF18O76093 207 aa12.77□□□□□ -0.37
CCM2-213ENST00000480658 ERLIN2O94905 339 aa12.77□□□□□ -0.37
CCM2-213ENST00000480658 STBD1O95210 358 aa12.77□□□□□ -0.37
CCM2-213ENST00000480658 ITGB1P05556 798 aa12.77□□□□□ -0.37
CCM2-213ENST00000480658 ALDH7A1P49419 539 aaKnown RBP12.77□□□□□ -0.37
CCM2-213ENST00000480658 NDUFV1P49821 464 aa12.77□□□□□ -0.37
CCM2-213ENST00000480658 SPIRE1Q08AE8 756 aa12.77□□□□□ -0.37
CCM2-213ENST00000480658 EMC2Q15006 297 aa12.77□□□□□ -0.37
CCM2-213ENST00000480658 EFHBQ8N7U6 833 aa12.77□□□□□ -0.37
CCM2-213ENST00000480658 COLGALT1Q8NBJ5 622 aa12.77□□□□□ -0.37
CCM2-213ENST00000480658 SPPL3Q8TCT6 385 aa12.77□□□□□ -0.37
CCM2-213ENST00000480658 URGCPQ8TCY9 931 aa12.77□□□□□ -0.37
CCM2-213ENST00000480658 GJA10Q969M2 543 aa12.77□□□□□ -0.37
CCM2-213ENST00000480658 CEP89Q96ST8 783 aa12.77□□□□□ -0.37
CCM2-213ENST00000480658 FDXACB1Q9BRP7 624 aaPredicted RBP12.77□□□□□ -0.37
CCM2-213ENST00000480658 NFKBIZQ9BYH8 718 aa12.77□□□□□ -0.37
CCM2-213ENST00000480658 TUFT1Q9NNX1 390 aa12.77□□□□□ -0.37
CCM2-213ENST00000480658 ALG13Q9NP73 1137 aaKnown RBP12.77□□□□□ -0.37
CCM2-213ENST00000480658 AGPAT5Q9NUQ2 364 aa12.77□□□□□ -0.37
CCM2-213ENST00000480658 KANSL3Q9P2N6 904 aa12.77□□□□□ -0.37
CCM2-213ENST00000480658 MUC3AQ02505 3323 aa12.77□□□□□ -0.37
CCM2-213ENST00000480658 WDR81Q562E7 1941 aa12.76□□□□□ -0.37
CCM2-213ENST00000480658 GRXCR2A6NFK2 248 aa12.76□□□□□ -0.37
CCM2-213ENST00000480658 EML1O00423 815 aa12.76□□□□□ -0.37
CCM2-213ENST00000480658 LAD1O00515 517 aa12.76□□□□□ -0.37
CCM2-213ENST00000480658 ZNF623O75123 536 aa12.76□□□□□ -0.37
CCM2-213ENST00000480658 ALADP13716 330 aa12.76□□□□□ -0.37
CCM2-213ENST00000480658 SMAD4Q13485 552 aaKnown RBP12.76□□□□□ -0.37
CCM2-213ENST00000480658 XKR9Q5GH70 373 aa12.76□□□□□ -0.37
CCM2-213ENST00000480658 FAM102BQ5T8I3 360 aa12.76□□□□□ -0.37
CCM2-213ENST00000480658 PLA2G4FQ68DD2 849 aa12.76□□□□□ -0.37
CCM2-213ENST00000480658 EP400NLQ6ZTU2 488 aa12.76□□□□□ -0.37
CCM2-213ENST00000480658 TPH2Q8IWU9 490 aa12.76□□□□□ -0.37
CCM2-213ENST00000480658 MCPH1Q8NEM0 835 aa12.76□□□□□ -0.37
CCM2-213ENST00000480658 FBXO18Q8NFZ0 1043 aa12.76□□□□□ -0.37
CCM2-213ENST00000480658 MICAL1Q8TDZ2 1067 aa12.76□□□□□ -0.37
CCM2-213ENST00000480658 MRPS27Q92552 414 aaKnown RBP12.76□□□□□ -0.37
CCM2-213ENST00000480658 HSD17B14Q9BPX1 270 aa12.76□□□□□ -0.37
CCM2-213ENST00000480658 EIF2AK1Q9BQI3 630 aaKnown RBP12.76□□□□□ -0.37
CCM2-213ENST00000480658 FAM105AQ9NUU6 356 aa12.76□□□□□ -0.37
CCM2-213ENST00000480658 TYW1Q9NV66 732 aaKnown RBP12.76□□□□□ -0.37
CCM2-213ENST00000480658 ZMYM2Q9UBW7 1377 aa12.76□□□□□ -0.37
CCM2-213ENST00000480658 JAK2O60674 1132 aa12.75□□□□□ -0.37
CCM2-213ENST00000480658 LARGE1O95461 756 aa12.75□□□□□ -0.37
CCM2-213ENST00000480658 FGFR1P11362 822 aa12.75□□□□□ -0.37
CCM2-213ENST00000480658 IBSPP21815 317 aaPredicted RBP12.75□□□□□ -0.37
CCM2-213ENST00000480658 TXKP42681 527 aa12.75□□□□□ -0.37
CCM2-213ENST00000480658 LAMTOR4Q0VGL1 99 aa12.75□□□□□ -0.37
CCM2-213ENST00000480658 HYAL1Q12794 435 aa12.75□□□□□ -0.37
CCM2-213ENST00000480658 MYO9BQ13459 2157 aa12.75□□□□□ -0.37
CCM2-213ENST00000480658 NOTUMQ6P988 496 aa12.75□□□□□ -0.37
CCM2-213ENST00000480658 KCNT2Q6UVM3 1135 aa12.75□□□□□ -0.37
CCM2-213ENST00000480658 PHLPP2Q6ZVD8 1323 aa12.75□□□□□ -0.37
CCM2-213ENST00000480658 FERMT3Q86UX7 667 aa12.75□□□□□ -0.37
CCM2-213ENST00000480658 NOSTRINQ8IVI9 506 aa12.75□□□□□ -0.37
CCM2-213ENST00000480658 LOXHD1Q8IVV2 1947 aa12.75□□□□□ -0.37
CCM2-213ENST00000480658 CCDC83Q8IWF9 413 aa12.75□□□□□ -0.37
CCM2-213ENST00000480658 FAM178BQ8IXR5 827 aa12.75□□□□□ -0.37
CCM2-213ENST00000480658 GJD3Q8N144 294 aa12.75□□□□□ -0.37
CCM2-213ENST00000480658 RNF169Q8NCN4 708 aa12.75□□□□□ -0.37
CCM2-213ENST00000480658 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.75□□□□□ -0.37
CCM2-213ENST00000480658 PRPF31Q8WWY3 499 aaKnown RBP12.75□□□□□ -0.37
CCM2-213ENST00000480658 TMEM169Q96HH4 297 aa12.75□□□□□ -0.37
CCM2-213ENST00000480658 DYDC2Q96IM9 177 aa12.75□□□□□ -0.37
CCM2-213ENST00000480658 CASD1Q96PB1 797 aa12.75□□□□□ -0.37
CCM2-213ENST00000480658 MTMR9Q96QG7 549 aa12.75□□□□□ -0.37
CCM2-213ENST00000480658 IFT122Q9HBG6 1241 aa12.75□□□□□ -0.37
CCM2-213ENST00000480658 ENTPD7Q9NQZ7 604 aa12.75□□□□□ -0.37
CCM2-213ENST00000480658 GJB4Q9NTQ9 266 aa12.75□□□□□ -0.37
CCM2-213ENST00000480658 SPG21Q9NZD8 308 aa12.75□□□□□ -0.37
CCM2-213ENST00000480658 CD207Q9UJ71 328 aa12.75□□□□□ -0.37
CCM2-213ENST00000480658 KIAA1671Q9BY89 1806 aa12.74□□□□□ -0.37
CCM2-213ENST00000480658 NR1I2O75469 434 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms