RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 QARSP47897 775 aaKnown RBP19.49■□□□□ 0.71
ECHDC1-216ENST00000479525 ADAM15Q13444 863 aa19.49■□□□□ 0.71
ECHDC1-216ENST00000479525 ANKRD1Q15327 319 aa19.49■□□□□ 0.71
ECHDC1-216ENST00000479525 TNFRSF25Q93038 417 aa19.49■□□□□ 0.71
ECHDC1-216ENST00000479525 CEP170P1Q96L14 293 aa19.49■□□□□ 0.71
ECHDC1-216ENST00000479525 LXNQ9BS40 222 aa19.49■□□□□ 0.71
ECHDC1-216ENST00000479525 LRFN3Q9BTN0 628 aa19.49■□□□□ 0.71
ECHDC1-216ENST00000479525 APOL5Q9BWW9 433 aa19.49■□□□□ 0.71
ECHDC1-216ENST00000479525 GCOM2Q9BZD3 368 aaPredicted RBP19.49■□□□□ 0.71
ECHDC1-216ENST00000479525 TMEM117Q9H0C3 514 aa19.49■□□□□ 0.71
ECHDC1-216ENST00000479525 CYP26B1Q9NR63 512 aa19.49■□□□□ 0.71
ECHDC1-216ENST00000479525 PIN4Q9Y237 131 aaKnown RBP19.49■□□□□ 0.71
ECHDC1-216ENST00000479525 MAFO75444 373 aaPredicted RBP19.48■□□□□ 0.71
ECHDC1-216ENST00000479525 PPP4R3AQ6IN85 833 aa19.48■□□□□ 0.71
ECHDC1-216ENST00000479525 ABI1Q8IZP0 508 aa19.48■□□□□ 0.71
ECHDC1-216ENST00000479525 VN1R2Q8NFZ6 395 aa19.48■□□□□ 0.71
ECHDC1-216ENST00000479525 ELAC1Q9H777 363 aaKnown RBP19.48■□□□□ 0.71
ECHDC1-216ENST00000479525 TLR9Q9NR96 1032 aa19.48■□□□□ 0.71
ECHDC1-216ENST00000479525 CLEC1BQ9P126 229 aa19.48■□□□□ 0.71
ECHDC1-216ENST00000479525 SRGAP2CP0DJJ0 459 aa19.47■□□□□ 0.71
ECHDC1-216ENST00000479525 ZP2Q05996 745 aa19.47■□□□□ 0.71
ECHDC1-216ENST00000479525 SPIRE1Q08AE8 756 aa19.47■□□□□ 0.71
ECHDC1-216ENST00000479525 NAALADL2Q58DX5 795 aa19.47■□□□□ 0.71
ECHDC1-216ENST00000479525 TWF2Q6IBS0 349 aaKnown RBP19.47■□□□□ 0.71
ECHDC1-216ENST00000479525 LLGL2Q6P1M3 1020 aa19.47■□□□□ 0.71
ECHDC1-216ENST00000479525 KCNT2Q6UVM3 1135 aa19.47■□□□□ 0.71
ECHDC1-216ENST00000479525 CCDC83Q8IWF9 413 aa19.47■□□□□ 0.71
ECHDC1-216ENST00000479525 DIS3L2Q8IYB7 885 aaKnown RBP19.47■□□□□ 0.71
ECHDC1-216ENST00000479525 FAM20AQ96MK3 541 aa19.47■□□□□ 0.71
ECHDC1-216ENST00000479525 TLE6Q9H808 572 aa19.47■□□□□ 0.71
ECHDC1-216ENST00000479525 MINDY3Q9H8M7 445 aa19.47■□□□□ 0.71
ECHDC1-216ENST00000479525 AAASQ9NRG9 546 aa19.47■□□□□ 0.71
ECHDC1-216ENST00000479525 CD207Q9UJ71 328 aa19.47■□□□□ 0.71
ECHDC1-216ENST00000479525 INPP5FQ9Y2H2 1132 aa19.47■□□□□ 0.71
ECHDC1-216ENST00000479525 P4HBP07237 508 aaKnown RBP19.46■□□□□ 0.71
ECHDC1-216ENST00000479525 GCFC2P16383 781 aaKnown RBP19.46■□□□□ 0.71
ECHDC1-216ENST00000479525 LAG3P18627 525 aa19.46■□□□□ 0.71
ECHDC1-216ENST00000479525 CA8P35219 290 aa19.46■□□□□ 0.71
ECHDC1-216ENST00000479525 DNM2P50570 870 aa19.46■□□□□ 0.71
ECHDC1-216ENST00000479525 POLGP54098 1239 aaPredicted RBP19.46■□□□□ 0.71
ECHDC1-216ENST00000479525 CATSPER4Q7RTX7 472 aa19.46■□□□□ 0.71
ECHDC1-216ENST00000479525 ZNF598Q86UK7 904 aaKnown RBP19.46■□□□□ 0.71
ECHDC1-216ENST00000479525 TPH2Q8IWU9 490 aa19.46■□□□□ 0.71
ECHDC1-216ENST00000479525 CDH22Q9UJ99 828 aa19.46■□□□□ 0.71
ECHDC1-216ENST00000479525 HIDE1A8MVS5 230 aa19.45■□□□□ 0.7
ECHDC1-216ENST00000479525 YWHABP31946 246 aaKnown RBP19.45■□□□□ 0.7
ECHDC1-216ENST00000479525 EPHA7Q15375 998 aa19.45■□□□□ 0.7
ECHDC1-216ENST00000479525 XKR9Q5GH70 373 aa19.45■□□□□ 0.7
ECHDC1-216ENST00000479525 FAM177A1Q8N128 213 aaPredicted RBP19.45■□□□□ 0.7
ECHDC1-216ENST00000479525 LRRC43Q8N309 656 aa19.45■□□□□ 0.7
ECHDC1-216ENST00000479525 WASF1Q92558 559 aa19.45■□□□□ 0.7
ECHDC1-216ENST00000479525 MSLNLQ96KJ4 702 aa19.45■□□□□ 0.7
ECHDC1-216ENST00000479525 C1QTNF1Q9BXJ1 281 aa19.45■□□□□ 0.7
ECHDC1-216ENST00000479525 IFT122Q9HBG6 1241 aa19.45■□□□□ 0.7
ECHDC1-216ENST00000479525 ENTPD7Q9NQZ7 604 aa19.45■□□□□ 0.7
ECHDC1-216ENST00000479525 COL4A3BPQ9Y5P4 624 aa19.45■□□□□ 0.7
ECHDC1-216ENST00000479525 A0A0U1RQF3 1178 aa19.44■□□□□ 0.7
ECHDC1-216ENST00000479525 SFPQP23246 707 aaKnown RBP eCLIP19.44■□□□□ 0.7
ECHDC1-216ENST00000479525 TXKP42681 527 aa19.44■□□□□ 0.7
ECHDC1-216ENST00000479525 PHKA2P46019 1235 aa19.44■□□□□ 0.7
ECHDC1-216ENST00000479525 EMC2Q15006 297 aa19.44■□□□□ 0.7
ECHDC1-216ENST00000479525 SMAD2Q15796 467 aaKnown RBP19.44■□□□□ 0.7
ECHDC1-216ENST00000479525 PUS10Q3MIT2 529 aaKnown RBP19.44■□□□□ 0.7
ECHDC1-216ENST00000479525 TMEM31Q5JXX7 168 aa19.44■□□□□ 0.7
ECHDC1-216ENST00000479525 TMEM173Q86WV6 379 aaPredicted RBP19.44■□□□□ 0.7
ECHDC1-216ENST00000479525 EFHBQ8N7U6 833 aa19.44■□□□□ 0.7
ECHDC1-216ENST00000479525 PRPF31Q8WWY3 499 aaKnown RBP19.44■□□□□ 0.7
ECHDC1-216ENST00000479525 AUTS2Q8WXX7 1259 aa19.44■□□□□ 0.7
ECHDC1-216ENST00000479525 ZNF558Q96NG5 402 aa19.44■□□□□ 0.7
ECHDC1-216ENST00000479525 TCF25Q9BQ70 676 aa19.44■□□□□ 0.7
ECHDC1-216ENST00000479525 EIF2AK1Q9BQI3 630 aaKnown RBP19.44■□□□□ 0.7
ECHDC1-216ENST00000479525 GBP3Q9H0R5 595 aa19.44■□□□□ 0.7
ECHDC1-216ENST00000479525 TMEM60Q9H2L4 133 aa19.44■□□□□ 0.7
ECHDC1-216ENST00000479525 BRMS1Q9HCU9 246 aa19.44■□□□□ 0.7
ECHDC1-216ENST00000479525 TDRD15B5MCY1 1934 aaKnown RBP19.44■□□□□ 0.7
ECHDC1-216ENST00000479525 POTEMA6NI47 508 aa19.44■□□□□ 0.7
ECHDC1-216ENST00000479525 PI4K2BG5E9Z4 385 aa19.44■□□□□ 0.7
ECHDC1-216ENST00000479525 B4GALT3O60512 393 aa19.44■□□□□ 0.7
ECHDC1-216ENST00000479525 ZC3H11AO75152 810 aaKnown RBP eCLIP19.44■□□□□ 0.7
ECHDC1-216ENST00000479525 BAG4O95429 457 aaKnown RBP19.44■□□□□ 0.7
ECHDC1-216ENST00000479525 SP100P23497 879 aaPredicted RBP19.44■□□□□ 0.7
ECHDC1-216ENST00000479525 SMAD4Q13485 552 aaKnown RBP19.44■□□□□ 0.7
ECHDC1-216ENST00000479525 CALCRLQ16602 461 aa19.44■□□□□ 0.7
ECHDC1-216ENST00000479525 SLC7A3Q8WY07 619 aa19.44■□□□□ 0.7
ECHDC1-216ENST00000479525 MRPS27Q92552 414 aaKnown RBP19.44■□□□□ 0.7
ECHDC1-216ENST00000479525 PPP2R3CQ969Q6 453 aa19.44■□□□□ 0.7
ECHDC1-216ENST00000479525 DHX33Q9H6R0 707 aaKnown RBP19.44■□□□□ 0.7
ECHDC1-216ENST00000479525 TRIOO75962 3097 aa19.43■□□□□ 0.7
ECHDC1-216ENST00000479525 FSCN2O14926 492 aa19.43■□□□□ 0.7
ECHDC1-216ENST00000479525 NCK2O43639 380 aa19.43■□□□□ 0.7
ECHDC1-216ENST00000479525 SLITRK3O94933 977 aa19.43■□□□□ 0.7
ECHDC1-216ENST00000479525 AFF1P51825 1210 aaKnown RBP19.43■□□□□ 0.7
ECHDC1-216ENST00000479525 LAMTOR4Q0VGL1 99 aa19.43■□□□□ 0.7
ECHDC1-216ENST00000479525 ZNF410Q86VK4 478 aa19.43■□□□□ 0.7
ECHDC1-216ENST00000479525 ADHFE1Q8IWW8 467 aa19.43■□□□□ 0.7
ECHDC1-216ENST00000479525 C4orf19Q8IY42 314 aa19.43■□□□□ 0.7
ECHDC1-216ENST00000479525 BCL7CQ8WUZ0 217 aaPredicted RBP19.43■□□□□ 0.7
ECHDC1-216ENST00000479525 TTC12Q9H892 705 aaPredicted RBP19.43■□□□□ 0.7
ECHDC1-216ENST00000479525 XPNPEP1Q9NQW7 623 aa19.43■□□□□ 0.7
ECHDC1-216ENST00000479525 FAM105AQ9NUU6 356 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms