RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 A0A1W2PQJ5 194 aa15.4■□□□□ 0.06
COL20A1-206ENST00000479501 PHBP35232 272 aa15.4■□□□□ 0.06
COL20A1-206ENST00000479501 SOX5P35711 763 aa15.4■□□□□ 0.06
COL20A1-206ENST00000479501 SESN3P58005 492 aa15.4■□□□□ 0.06
COL20A1-206ENST00000479501 HIBCHQ6NVY1 386 aaPredicted RBP15.4■□□□□ 0.06
COL20A1-206ENST00000479501 CATSPER3Q86XQ3 398 aa15.4■□□□□ 0.06
COL20A1-206ENST00000479501 TAB3Q8N5C8 712 aaPredicted RBP15.4■□□□□ 0.06
COL20A1-206ENST00000479501 SAAL1Q96ER3 474 aa15.4■□□□□ 0.06
COL20A1-206ENST00000479501 RPAP3Q9H6T3 665 aaPredicted RBP15.4■□□□□ 0.06
COL20A1-206ENST00000479501 ESYT3A0FGR9 886 aa15.4■□□□□ 0.06
COL20A1-206ENST00000479501 WDR46O15213 610 aaKnown RBP15.4■□□□□ 0.06
COL20A1-206ENST00000479501 SLC16A3O15427 465 aaKnown RBP15.4■□□□□ 0.06
COL20A1-206ENST00000479501 CTNND1O60716 968 aaKnown RBP15.4■□□□□ 0.06
COL20A1-206ENST00000479501 FTLP02792 175 aaPredicted RBP15.4■□□□□ 0.06
COL20A1-206ENST00000479501 MYBP10242 640 aa15.4■□□□□ 0.06
COL20A1-206ENST00000479501 TPD52P55327 224 aaPredicted RBP15.4■□□□□ 0.06
COL20A1-206ENST00000479501 SURF1Q15526 300 aa15.4■□□□□ 0.06
COL20A1-206ENST00000479501 ZNF746Q6NUN9 644 aaPredicted RBP15.4■□□□□ 0.06
COL20A1-206ENST00000479501 HACE1Q8IYU2 909 aa15.4■□□□□ 0.06
COL20A1-206ENST00000479501 NLRP4Q96MN2 994 aa15.4■□□□□ 0.06
COL20A1-206ENST00000479501 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.4■□□□□ 0.06
COL20A1-206ENST00000479501 I3L4J1 428 aa15.4■□□□□ 0.06
COL20A1-206ENST00000479501 ZNF185O15231 689 aa15.4■□□□□ 0.06
COL20A1-206ENST00000479501 CLDN3O15551 220 aa15.4■□□□□ 0.06
COL20A1-206ENST00000479501 ACTN1P12814 892 aa15.4■□□□□ 0.06
COL20A1-206ENST00000479501 RFX1P22670 979 aa15.4■□□□□ 0.06
COL20A1-206ENST00000479501 ANKS1AQ92625 1134 aa15.4■□□□□ 0.06
COL20A1-206ENST00000479501 N4BP2L2Q92802 583 aaPredicted RBP15.4■□□□□ 0.06
COL20A1-206ENST00000479501 DDX47Q9H0S4 455 aaKnown RBP15.4■□□□□ 0.06
COL20A1-206ENST00000479501 ANAPC7Q9UJX3 599 aa15.4■□□□□ 0.06
COL20A1-206ENST00000479501 PLAGL2Q9UPG8 496 aa15.4■□□□□ 0.06
COL20A1-206ENST00000479501 COL23A1Q86Y22 540 aaPredicted RBP15.39■□□□□ 0.05
COL20A1-206ENST00000479501 PSMD14O00487 310 aa15.39■□□□□ 0.05
COL20A1-206ENST00000479501 NR1D1P20393 614 aa15.39■□□□□ 0.05
COL20A1-206ENST00000479501 SLMAPQ14BN4 828 aa15.39■□□□□ 0.05
COL20A1-206ENST00000479501 PSMD6Q15008 389 aa15.39■□□□□ 0.05
COL20A1-206ENST00000479501 MAP7D3Q8IWC1 876 aa15.39■□□□□ 0.05
COL20A1-206ENST00000479501 THNSL1Q8IYQ7 743 aa15.39■□□□□ 0.05
COL20A1-206ENST00000479501 KLHL29Q96CT2 875 aa15.39■□□□□ 0.05
COL20A1-206ENST00000479501 ACAD9Q9H845 621 aa15.39■□□□□ 0.05
COL20A1-206ENST00000479501 SYNGAP1Q96PV0 1343 aa15.39■□□□□ 0.05
COL20A1-206ENST00000479501 KDM4FA0A1W2PPD8 638 aa15.39■□□□□ 0.05
COL20A1-206ENST00000479501 CYP11B2P19099 503 aa15.39■□□□□ 0.05
COL20A1-206ENST00000479501 SLC9A1P19634 815 aa15.39■□□□□ 0.05
COL20A1-206ENST00000479501 YWHABP31946 246 aaKnown RBP15.39■□□□□ 0.05
COL20A1-206ENST00000479501 ERVK-24P63145 666 aa15.39■□□□□ 0.05
COL20A1-206ENST00000479501 RFFLQ8WZ73 363 aa15.39■□□□□ 0.05
COL20A1-206ENST00000479501 PRMT6Q96LA8 375 aaPredicted RBP15.39■□□□□ 0.05
COL20A1-206ENST00000479501 ADAM22Q9P0K1 906 aa15.39■□□□□ 0.05
COL20A1-206ENST00000479501 ANAPC5Q9UJX4 755 aa15.39■□□□□ 0.05
COL20A1-206ENST00000479501 A0A087X0B3 334 aa15.38■□□□□ 0.05
COL20A1-206ENST00000479501 FAM237AA0A1B0GTK4 181 aa15.38■□□□□ 0.05
COL20A1-206ENST00000479501 GRID2IPA4D2P6 1211 aa15.38■□□□□ 0.05
COL20A1-206ENST00000479501 ZSCAN20P17040 1043 aaPredicted RBP15.38■□□□□ 0.05
COL20A1-206ENST00000479501 GPR162Q16538 588 aa15.38■□□□□ 0.05
COL20A1-206ENST00000479501 FAM163AQ96GL9 167 aaPredicted RBP15.38■□□□□ 0.05
COL20A1-206ENST00000479501 RILPQ96NA2 401 aa15.38■□□□□ 0.05
COL20A1-206ENST00000479501 TMEM39BQ9GZU3 492 aa15.38■□□□□ 0.05
COL20A1-206ENST00000479501 NOVA2Q9UNW9 492 aaKnown RBP15.38■□□□□ 0.05
COL20A1-206ENST00000479501 SNX24Q9Y343 169 aa15.38■□□□□ 0.05
COL20A1-206ENST00000479501 TARSL2A2RTX5 802 aaKnown RBP15.38■□□□□ 0.05
COL20A1-206ENST00000479501 CASQ2O14958 399 aaPredicted RBP15.38■□□□□ 0.05
COL20A1-206ENST00000479501 SMIM24O75264 130 aa15.38■□□□□ 0.05
COL20A1-206ENST00000479501 GUCY2CP25092 1073 aa15.38■□□□□ 0.05
COL20A1-206ENST00000479501 GGCXP38435 758 aa15.38■□□□□ 0.05
COL20A1-206ENST00000479501 HMGCS2P54868 508 aa15.38■□□□□ 0.05
COL20A1-206ENST00000479501 MTMR2Q13614 643 aa15.38■□□□□ 0.05
COL20A1-206ENST00000479501 MAP7Q14244 749 aa15.38■□□□□ 0.05
COL20A1-206ENST00000479501 ARMC9Q7Z3E5 817 aa15.38■□□□□ 0.05
COL20A1-206ENST00000479501 COG1Q8WTW3 980 aa15.38■□□□□ 0.05
COL20A1-206ENST00000479501 SGK1O00141 431 aa15.38■□□□□ 0.05
COL20A1-206ENST00000479501 BSPRYQ5W0U4 402 aa15.38■□□□□ 0.05
COL20A1-206ENST00000479501 CYP4F22Q6NT55 531 aa15.38■□□□□ 0.05
COL20A1-206ENST00000479501 SMC1BQ8NDV3 1235 aa15.38■□□□□ 0.05
COL20A1-206ENST00000479501 HAUS1Q96CS2 278 aa15.38■□□□□ 0.05
COL20A1-206ENST00000479501 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.38■□□□□ 0.05
COL20A1-206ENST00000479501 TPX2Q9ULW0 747 aaKnown RBP15.38■□□□□ 0.05
COL20A1-206ENST00000479501 PODXLO00592 558 aa15.38■□□□□ 0.05
COL20A1-206ENST00000479501 KRT1P04264 644 aa15.38■□□□□ 0.05
COL20A1-206ENST00000479501 EIF3BP55884 814 aaKnown RBP15.38■□□□□ 0.05
COL20A1-206ENST00000479501 APOBEC3FQ8IUX4 373 aaKnown RBP15.38■□□□□ 0.05
COL20A1-206ENST00000479501 EHD4Q9H223 541 aa15.38■□□□□ 0.05
COL20A1-206ENST00000479501 ACTR5Q9H9F9 607 aaPredicted RBP15.38■□□□□ 0.05
COL20A1-206ENST00000479501 KCND2Q9NZV8 630 aa15.38■□□□□ 0.05
COL20A1-206ENST00000479501 H7C0C1 242 aa15.37■□□□□ 0.05
COL20A1-206ENST00000479501 TLR3O15455 904 aaKnown RBP15.37■□□□□ 0.05
COL20A1-206ENST00000479501 CYTH3O43739 400 aa15.37■□□□□ 0.05
COL20A1-206ENST00000479501 ATP5OP48047 213 aa15.37■□□□□ 0.05
COL20A1-206ENST00000479501 FMO5P49326 533 aa15.37■□□□□ 0.05
COL20A1-206ENST00000479501 ZNF211Q13398 564 aaPredicted RBP15.37■□□□□ 0.05
COL20A1-206ENST00000479501 BAATQ14032 418 aaPredicted RBP15.37■□□□□ 0.05
COL20A1-206ENST00000479501 MAPK6Q16659 721 aa15.37■□□□□ 0.05
COL20A1-206ENST00000479501 ZC2HC1CQ53FD0 456 aaPredicted RBP15.37■□□□□ 0.05
COL20A1-206ENST00000479501 CENPPQ6IPU0 288 aa15.37■□□□□ 0.05
COL20A1-206ENST00000479501 KCTD17Q8N5Z5 321 aa15.37■□□□□ 0.05
COL20A1-206ENST00000479501 SYT2Q8N9I0 419 aaPredicted RBP15.37■□□□□ 0.05
COL20A1-206ENST00000479501 TTC16Q8NEE8 873 aa15.37■□□□□ 0.05
COL20A1-206ENST00000479501 RIT2Q99578 217 aa15.37■□□□□ 0.05
COL20A1-206ENST00000479501 LRRC1Q9BTT6 524 aa15.37■□□□□ 0.05
COL20A1-206ENST00000479501 HMGB1P1B2RPK0 211 aaPredicted RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms