RNA–Protein interactions for RNA: ENST00000479381.5

CMTM1-208, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 995 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-208ENST00000479381 TECP42680 631 aa10.14□□□□□ -0.79
CMTM1-208ENST00000479381 MCM2P49736 904 aa10.14□□□□□ -0.79
CMTM1-208ENST00000479381 GPC3P51654 580 aa10.14□□□□□ -0.79
CMTM1-208ENST00000479381 NPEPPSP55786 919 aa10.14□□□□□ -0.79
CMTM1-208ENST00000479381 MRPS5P82675 430 aaKnown RBP10.14□□□□□ -0.79
CMTM1-208ENST00000479381 CDC42EP1Q00587 391 aa10.14□□□□□ -0.79
CMTM1-208ENST00000479381 ST3GAL1Q11201 340 aa10.14□□□□□ -0.79
CMTM1-208ENST00000479381 TIGD5Q53EQ6 642 aa10.14□□□□□ -0.79
CMTM1-208ENST00000479381 TJAP1Q5JTD0 557 aa10.14□□□□□ -0.79
CMTM1-208ENST00000479381 SLC24A5Q71RS6 500 aa10.14□□□□□ -0.79
CMTM1-208ENST00000479381 NEK9Q8TD19 979 aa10.14□□□□□ -0.79
CMTM1-208ENST00000479381 MICAL1Q8TDZ2 1067 aa10.14□□□□□ -0.79
CMTM1-208ENST00000479381 TMEM40Q8WWA1 233 aa10.14□□□□□ -0.79
CMTM1-208ENST00000479381 TCP11Q8WWU5 503 aa10.14□□□□□ -0.79
CMTM1-208ENST00000479381 PSPC1Q8WXF1 523 aaKnown RBP10.14□□□□□ -0.79
CMTM1-208ENST00000479381 LINC01599Q8WXQ3 324 aa10.14□□□□□ -0.79
CMTM1-208ENST00000479381 PPP2R3CQ969Q6 453 aa10.14□□□□□ -0.79
CMTM1-208ENST00000479381 TMEM143Q96AN5 459 aa10.14□□□□□ -0.79
CMTM1-208ENST00000479381 EIF2AK1Q9BQI3 630 aaKnown RBP10.14□□□□□ -0.79
CMTM1-208ENST00000479381 FDXACB1Q9BRP7 624 aaPredicted RBP10.14□□□□□ -0.79
CMTM1-208ENST00000479381 C11orf84Q9BUA3 381 aaPredicted RBP10.14□□□□□ -0.79
CMTM1-208ENST00000479381 DACT1Q9NYF0 836 aa10.14□□□□□ -0.79
CMTM1-208ENST00000479381 VAV3Q9UKW4 847 aa10.14□□□□□ -0.79
CMTM1-208ENST00000479381 PIN4Q9Y237 131 aaKnown RBP10.14□□□□□ -0.79
CMTM1-208ENST00000479381 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.14□□□□□ -0.79
CMTM1-208ENST00000479381 RALGAPA2Q2PPJ7 1873 aa10.13□□□□□ -0.79
CMTM1-208ENST00000479381 HOXA2O43364 376 aa10.13□□□□□ -0.79
CMTM1-208ENST00000479381 USO1O60763 962 aaKnown RBP10.13□□□□□ -0.79
CMTM1-208ENST00000479381 GPR32O75388 356 aa10.13□□□□□ -0.79
CMTM1-208ENST00000479381 CSDE1O75534 798 aaKnown RBP10.13□□□□□ -0.79
CMTM1-208ENST00000479381 ERLIN2O94905 339 aa10.13□□□□□ -0.79
CMTM1-208ENST00000479381 EIF4BP23588 611 aaKnown RBP10.13□□□□□ -0.79
CMTM1-208ENST00000479381 RFC5P40937 340 aa10.13□□□□□ -0.79
CMTM1-208ENST00000479381 GATMP50440 423 aa10.13□□□□□ -0.79
CMTM1-208ENST00000479381 LSM11P83369 360 aaKnown RBP eCLIP10.13□□□□□ -0.79
CMTM1-208ENST00000479381 NCBP1Q09161 790 aaKnown RBP10.13□□□□□ -0.79
CMTM1-208ENST00000479381 TFDP1Q14186 410 aa10.13□□□□□ -0.79
CMTM1-208ENST00000479381 EMC2Q15006 297 aa10.13□□□□□ -0.79
CMTM1-208ENST00000479381 ZRSR1Q15695 479 aaKnown RBP10.13□□□□□ -0.79
CMTM1-208ENST00000479381 HAUS3Q68CZ6 603 aa10.13□□□□□ -0.79
CMTM1-208ENST00000479381 MAEAQ7L5Y9 396 aa10.13□□□□□ -0.79
CMTM1-208ENST00000479381 THNSL1Q8IYQ7 743 aa10.13□□□□□ -0.79
CMTM1-208ENST00000479381 CMTR2Q8IYT2 770 aaKnown RBP10.13□□□□□ -0.79
CMTM1-208ENST00000479381 TMEM87AQ8NBN3 555 aa10.13□□□□□ -0.79
CMTM1-208ENST00000479381 HAS1Q92839 578 aa10.13□□□□□ -0.79
CMTM1-208ENST00000479381 HLA-CQ95604 372 aa10.13□□□□□ -0.79
CMTM1-208ENST00000479381 KCNK17Q96T54 332 aa10.13□□□□□ -0.79
CMTM1-208ENST00000479381 NIFKQ9BYG3 293 aaKnown RBP10.13□□□□□ -0.79
CMTM1-208ENST00000479381 RAB34Q9BZG1 259 aa10.13□□□□□ -0.79
CMTM1-208ENST00000479381 FOXP1Q9H334 677 aaPredicted RBP10.13□□□□□ -0.79
CMTM1-208ENST00000479381 TMX1Q9H3N1 280 aa10.13□□□□□ -0.79
CMTM1-208ENST00000479381 PCDHB12Q9Y5F1 795 aa10.13□□□□□ -0.79
CMTM1-208ENST00000479381 COL4A3BPQ9Y5P4 624 aa10.13□□□□□ -0.79
CMTM1-208ENST00000479381 GTF3C3Q9Y5Q9 886 aa10.13□□□□□ -0.79
CMTM1-208ENST00000479381 MRPL42Q9Y6G3 142 aaKnown RBP10.13□□□□□ -0.79
CMTM1-208ENST00000479381 MGEA5O60502 916 aa10.12□□□□□ -0.79
CMTM1-208ENST00000479381 LPXNO60711 386 aa10.12□□□□□ -0.79
CMTM1-208ENST00000479381 MAFO75444 373 aaPredicted RBP10.12□□□□□ -0.79
CMTM1-208ENST00000479381 DGKIO75912 1065 aa10.12□□□□□ -0.79
CMTM1-208ENST00000479381 RB1P06400 928 aa10.12□□□□□ -0.79
CMTM1-208ENST00000479381 FGFR1P11362 822 aa10.12□□□□□ -0.79
CMTM1-208ENST00000479381 DARSP14868 501 aaKnown RBP10.12□□□□□ -0.79
CMTM1-208ENST00000479381 LIG1P18858 919 aa10.12□□□□□ -0.79
CMTM1-208ENST00000479381 GJB2P29033 226 aa10.12□□□□□ -0.79
CMTM1-208ENST00000479381 BMPR1AP36894 532 aa10.12□□□□□ -0.79
CMTM1-208ENST00000479381 DRP2Q13474 957 aa10.12□□□□□ -0.79
CMTM1-208ENST00000479381 LONRF3Q496Y0 759 aa10.12□□□□□ -0.79
CMTM1-208ENST00000479381 ANO5Q75V66 913 aa10.12□□□□□ -0.79
CMTM1-208ENST00000479381 ZNF410Q86VK4 478 aa10.12□□□□□ -0.79
CMTM1-208ENST00000479381 NOSTRINQ8IVI9 506 aa10.12□□□□□ -0.79
CMTM1-208ENST00000479381 KSR1Q8IVT5 923 aa10.12□□□□□ -0.79
CMTM1-208ENST00000479381 SPNS2Q8IVW8 549 aa10.12□□□□□ -0.79
CMTM1-208ENST00000479381 C4orf19Q8IY42 314 aa10.12□□□□□ -0.79
CMTM1-208ENST00000479381 FBXO18Q8NFZ0 1043 aa10.12□□□□□ -0.79
CMTM1-208ENST00000479381 ATXN2LQ8WWM7 1075 aaKnown RBP10.12□□□□□ -0.79
CMTM1-208ENST00000479381 TNFRSF25Q93038 417 aa10.12□□□□□ -0.79
CMTM1-208ENST00000479381 ZDHHC16Q969W1 377 aa10.12□□□□□ -0.79
CMTM1-208ENST00000479381 TMX3Q96JJ7 454 aa10.12□□□□□ -0.79
CMTM1-208ENST00000479381 IGFLR1Q9H665 355 aa10.12□□□□□ -0.79
CMTM1-208ENST00000479381 ALG13Q9NP73 1137 aaKnown RBP10.12□□□□□ -0.79
CMTM1-208ENST00000479381 RGS18Q9NS28 235 aa10.12□□□□□ -0.79
CMTM1-208ENST00000479381 LMCD1Q9NZU5 365 aa10.12□□□□□ -0.79
CMTM1-208ENST00000479381 COG5Q9UP83 839 aa10.12□□□□□ -0.79
CMTM1-208ENST00000479381 INPP5FQ9Y2H2 1132 aa10.12□□□□□ -0.79
CMTM1-208ENST00000479381 PPME1Q9Y570 386 aa10.12□□□□□ -0.79
CMTM1-208ENST00000479381 PRRC2BQ5JSZ5 2229 aaKnown RBP10.11□□□□□ -0.79
CMTM1-208ENST00000479381 TTC3P53804 2025 aa10.11□□□□□ -0.79
CMTM1-208ENST00000479381 VPS37CA5D8V6 355 aaPredicted RBP10.11□□□□□ -0.79
CMTM1-208ENST00000479381 ARHGEF35A5YM69 484 aa10.11□□□□□ -0.79
CMTM1-208ENST00000479381 H3BNC9 293 aa10.11□□□□□ -0.79
CMTM1-208ENST00000479381 INO80B-WBP1J3KQ70 363 aa10.11□□□□□ -0.79
CMTM1-208ENST00000479381 GAS2O43903 313 aaKnown RBP10.11□□□□□ -0.79
CMTM1-208ENST00000479381 SKIP12755 728 aa10.11□□□□□ -0.79
CMTM1-208ENST00000479381 CCT6AP40227 531 aaKnown RBP10.11□□□□□ -0.79
CMTM1-208ENST00000479381 PHKA2P46019 1235 aa10.11□□□□□ -0.79
CMTM1-208ENST00000479381 TFF2Q03403 129 aa10.11□□□□□ -0.79
CMTM1-208ENST00000479381 RNASELQ05823 741 aaKnown RBP10.11□□□□□ -0.79
CMTM1-208ENST00000479381 NBR1Q14596 966 aa10.11□□□□□ -0.79
CMTM1-208ENST00000479381 TARBP2Q15633 366 aaKnown RBP10.11□□□□□ -0.79
CMTM1-208ENST00000479381 FAM102BQ5T8I3 360 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms