RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 GLDCP23378 1020 aa6.59□□□□□ -1.35
RFC4-212ENST00000479307 THBS2P35442 1172 aa6.59□□□□□ -1.35
RFC4-212ENST00000479307 TXKP42681 527 aa6.59□□□□□ -1.35
RFC4-212ENST00000479307 RGS3P49796 1198 aa6.59□□□□□ -1.35
RFC4-212ENST00000479307 PIN1Q13526 163 aaPredicted RBP6.59□□□□□ -1.35
RFC4-212ENST00000479307 NFE2Q16621 373 aaPredicted RBP6.59□□□□□ -1.35
RFC4-212ENST00000479307 ZBTB41Q5SVQ8 909 aa6.59□□□□□ -1.35
RFC4-212ENST00000479307 TTLL7Q6ZT98 887 aa6.59□□□□□ -1.35
RFC4-212ENST00000479307 KCNN1Q92952 543 aa6.59□□□□□ -1.35
RFC4-212ENST00000479307 RAX2Q96IS3 184 aa6.59□□□□□ -1.35
RFC4-212ENST00000479307 FAXDC2Q96IV6 333 aa6.59□□□□□ -1.35
RFC4-212ENST00000479307 SIGLEC10Q96LC7 697 aa6.59□□□□□ -1.35
RFC4-212ENST00000479307 SGPP1Q9BX95 441 aa6.59□□□□□ -1.35
RFC4-212ENST00000479307 SEMA4AQ9H3S1 761 aa6.59□□□□□ -1.35
RFC4-212ENST00000479307 CCM2LQ9NUG4 571 aaPredicted RBP6.59□□□□□ -1.35
RFC4-212ENST00000479307 ZFP69BQ9UJL9 534 aa6.59□□□□□ -1.35
RFC4-212ENST00000479307 PPP2R3BQ9Y5P8 575 aa6.59□□□□□ -1.35
RFC4-212ENST00000479307 NUMBLQ9Y6R0 609 aa6.59□□□□□ -1.35
RFC4-212ENST00000479307 LRRC7Q96NW7 1537 aa6.59□□□□□ -1.35
RFC4-212ENST00000479307 ELL2O00472 640 aaPredicted RBP6.58□□□□□ -1.36
RFC4-212ENST00000479307 AKAP10O43572 662 aa6.58□□□□□ -1.36
RFC4-212ENST00000479307 MARCH6O60337 910 aa6.58□□□□□ -1.36
RFC4-212ENST00000479307 APOL3O95236 402 aa6.58□□□□□ -1.36
RFC4-212ENST00000479307 PARNO95453 639 aaKnown RBP6.58□□□□□ -1.36
RFC4-212ENST00000479307 MED14OSP0DP75 135 aa6.58□□□□□ -1.36
RFC4-212ENST00000479307 CCND1P24385 295 aa6.58□□□□□ -1.36
RFC4-212ENST00000479307 MAP3K12Q12852 859 aa6.58□□□□□ -1.36
RFC4-212ENST00000479307 NFATC3Q12968 1075 aa6.58□□□□□ -1.36
RFC4-212ENST00000479307 UGT8Q16880 541 aa6.58□□□□□ -1.36
RFC4-212ENST00000479307 PGM2L1Q6PCE3 622 aa6.58□□□□□ -1.36
RFC4-212ENST00000479307 CMIPQ8IY22 773 aa6.58□□□□□ -1.36
RFC4-212ENST00000479307 HOOK2Q96ED9 719 aa6.58□□□□□ -1.36
RFC4-212ENST00000479307 PITHD1Q9GZP4 211 aaPredicted RBP6.58□□□□□ -1.36
RFC4-212ENST00000479307 AASDHPPTQ9NRN7 309 aa6.58□□□□□ -1.36
RFC4-212ENST00000479307 KCND1Q9NSA2 647 aa6.58□□□□□ -1.36
RFC4-212ENST00000479307 FBXO10Q9UK96 956 aa6.58□□□□□ -1.36
RFC4-212ENST00000479307 DENND2AQ9ULE3 1009 aa6.58□□□□□ -1.36
RFC4-212ENST00000479307 PLCH2O75038 1416 aa6.58□□□□□ -1.36
RFC4-212ENST00000479307 PRSS38A1L453 326 aa6.57□□□□□ -1.36
RFC4-212ENST00000479307 SNUPNO95149 360 aaKnown RBP6.57□□□□□ -1.36
RFC4-212ENST00000479307 RECQLP46063 649 aaPredicted RBP6.57□□□□□ -1.36
RFC4-212ENST00000479307 RAB27AP51159 221 aa6.57□□□□□ -1.36
RFC4-212ENST00000479307 IL13RA1P78552 427 aa6.57□□□□□ -1.36
RFC4-212ENST00000479307 MRPS9P82933 396 aaKnown RBP6.57□□□□□ -1.36
RFC4-212ENST00000479307 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.57□□□□□ -1.367e-6■■■■□ 20.8
RFC4-212ENST00000479307 KANK2Q63ZY3 851 aa6.57□□□□□ -1.36
RFC4-212ENST00000479307 CCDC62Q6P9F0 684 aa6.57□□□□□ -1.36
RFC4-212ENST00000479307 LRSAM1Q6UWE0 723 aa6.57□□□□□ -1.36
RFC4-212ENST00000479307 PNMA8AQ86V59 439 aaPredicted RBP6.57□□□□□ -1.36
RFC4-212ENST00000479307 FAM84AQ96KN4 292 aa6.57□□□□□ -1.36
RFC4-212ENST00000479307 PPP1R16BQ96T49 567 aa6.57□□□□□ -1.36
RFC4-212ENST00000479307 TACO1Q9BSH4 297 aaKnown RBP6.57□□□□□ -1.36
RFC4-212ENST00000479307 ANO3Q9BYT9 981 aa6.57□□□□□ -1.36
RFC4-212ENST00000479307 CDH19Q9H159 772 aa6.57□□□□□ -1.36
RFC4-212ENST00000479307 KCNK12Q9HB15 430 aa6.57□□□□□ -1.36
RFC4-212ENST00000479307 TCF7L1Q9HCS4 588 aa6.57□□□□□ -1.36
RFC4-212ENST00000479307 KCMF1Q9P0J7 381 aa6.57□□□□□ -1.36
RFC4-212ENST00000479307 CHPF2Q9P2E5 772 aa6.57□□□□□ -1.36
RFC4-212ENST00000479307 IRAK3Q9Y616 596 aa6.57□□□□□ -1.36
RFC4-212ENST00000479307 PMF1-BGLAPU3KQ54 211 aa6.57□□□□□ -1.36
RFC4-212ENST00000479307 CLTCQ00610 1675 aaKnown RBP6.57□□□□□ -1.36
RFC4-212ENST00000479307 MYPNQ86TC9 1320 aa6.56□□□□□ -1.36
RFC4-212ENST00000479307 A2ML1A8K2U0 1454 aa6.56□□□□□ -1.36
RFC4-212ENST00000479307 MLH3Q9UHC1 1453 aa6.56□□□□□ -1.36
RFC4-212ENST00000479307 KLHL33A6NCF5 533 aa6.56□□□□□ -1.36
RFC4-212ENST00000479307 ETV2O00321 342 aaPredicted RBP6.56□□□□□ -1.36
RFC4-212ENST00000479307 H2AFYO75367 372 aaKnown RBP6.56□□□□□ -1.36
RFC4-212ENST00000479307 ABLIM3O94929 683 aa6.56□□□□□ -1.36
RFC4-212ENST00000479307 IL18BPO95998 194 aa6.56□□□□□ -1.36
RFC4-212ENST00000479307 PFKMP08237 780 aa6.56□□□□□ -1.36
RFC4-212ENST00000479307 LIMS1P48059 325 aa6.56□□□□□ -1.36
RFC4-212ENST00000479307 GLRBP48167 497 aa6.56□□□□□ -1.36
RFC4-212ENST00000479307 GPR15P49685 360 aa6.56□□□□□ -1.36
RFC4-212ENST00000479307 HTRA3P83110 453 aa6.56□□□□□ -1.36
RFC4-212ENST00000479307 CAP1Q01518 475 aa6.56□□□□□ -1.36
RFC4-212ENST00000479307 NOLC1Q14978 699 aaKnown RBP eCLIP6.56□□□□□ -1.36
RFC4-212ENST00000479307 PPP2R5AQ15172 486 aa6.56□□□□□ -1.36
RFC4-212ENST00000479307 CCDC178Q5BJE1 867 aa6.56□□□□□ -1.36
RFC4-212ENST00000479307 CT83Q5H943 113 aa6.56□□□□□ -1.36
RFC4-212ENST00000479307 PITRM1Q5JRX3 1037 aa6.56□□□□□ -1.36
RFC4-212ENST00000479307 TMEM240Q5SV17 173 aa6.56□□□□□ -1.36
RFC4-212ENST00000479307 BMP8AQ7Z5Y6 402 aa6.56□□□□□ -1.36
RFC4-212ENST00000479307 BHLHE22Q8NFJ8 381 aaPredicted RBP6.56□□□□□ -1.36
RFC4-212ENST00000479307 TGFBRAP1Q8WUH2 860 aa6.56□□□□□ -1.36
RFC4-212ENST00000479307 ZBTB8AQ96BR9 441 aa6.56□□□□□ -1.36
RFC4-212ENST00000479307 EAF2Q96CJ1 260 aaPredicted RBP6.56□□□□□ -1.36
RFC4-212ENST00000479307 ZSWIM3Q96MP5 696 aa6.56□□□□□ -1.36
RFC4-212ENST00000479307 LUC7LQ9NQ29 371 aaKnown RBP6.56□□□□□ -1.36
RFC4-212ENST00000479307 DNAJC28Q9NX36 388 aa6.56□□□□□ -1.36
RFC4-212ENST00000479307 DEPDC5O75140 1603 aa6.56□□□□□ -1.36
RFC4-212ENST00000479307 XIRP1Q702N8 1843 aaKnown RBP6.55□□□□□ -1.36
RFC4-212ENST00000479307 FARP2O94887 1054 aaPredicted RBP6.55□□□□□ -1.36
RFC4-212ENST00000479307 CLEC2LP0C7M8 214 aa6.55□□□□□ -1.36
RFC4-212ENST00000479307 MTNR1BP49286 362 aa6.55□□□□□ -1.36
RFC4-212ENST00000479307 SLC5A3P53794 718 aa6.55□□□□□ -1.36
RFC4-212ENST00000479307 MESP2Q0VG99 397 aa6.55□□□□□ -1.36
RFC4-212ENST00000479307 UNQ6494/PRO21346Q6UXR6 183 aa6.55□□□□□ -1.36
RFC4-212ENST00000479307 SYDE1Q6ZW31 735 aaPredicted RBP6.55□□□□□ -1.36
RFC4-212ENST00000479307 KCNK18Q7Z418 384 aa6.55□□□□□ -1.36
RFC4-212ENST00000479307 FAM129CQ86XR2 697 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms