RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 KIZQ2M2Z5 673 aa7.52□□□□□ -1.21
VCP-205ENST00000479300 CLLU1OSQ5K130 101 aa7.52□□□□□ -1.21
VCP-205ENST00000479300 FAM160B1Q5W0V3 765 aa7.52□□□□□ -1.21
VCP-205ENST00000479300 WWC2Q6AWC2 1192 aa7.52□□□□□ -1.21
VCP-205ENST00000479300 CPLX2Q6PUV4 134 aaKnown RBP7.52□□□□□ -1.21
VCP-205ENST00000479300 KCNT2Q6UVM3 1135 aa7.52□□□□□ -1.21
VCP-205ENST00000479300 SKAP1Q86WV1 359 aa7.52□□□□□ -1.21
VCP-205ENST00000479300 TMEM173Q86WV6 379 aaPredicted RBP7.52□□□□□ -1.21
VCP-205ENST00000479300 CCDC60Q8IWA6 550 aaPredicted RBP7.52□□□□□ -1.21
VCP-205ENST00000479300 TRIM22Q8IYM9 498 aa7.52□□□□□ -1.21
VCP-205ENST00000479300 SLC39A11Q8N1S5 342 aa7.52□□□□□ -1.21
VCP-205ENST00000479300 NME8Q8N427 588 aa7.52□□□□□ -1.21
VCP-205ENST00000479300 MRPL43Q8N983 215 aaKnown RBP7.52□□□□□ -1.21
VCP-205ENST00000479300 CCDC148Q8NFR7 591 aa7.52□□□□□ -1.21
VCP-205ENST00000479300 BICD2Q8TD16 824 aa7.52□□□□□ -1.21
VCP-205ENST00000479300 BCL7CQ8WUZ0 217 aaPredicted RBP7.52□□□□□ -1.21
VCP-205ENST00000479300 AUTS2Q8WXX7 1259 aa7.52□□□□□ -1.21
VCP-205ENST00000479300 BRF1Q92994 677 aa7.52□□□□□ -1.21
VCP-205ENST00000479300 NKD2Q969F2 451 aaPredicted RBP7.52□□□□□ -1.21
VCP-205ENST00000479300 PGBD1Q96JS3 809 aa7.52□□□□□ -1.21
VCP-205ENST00000479300 OSMRQ99650 979 aa7.52□□□□□ -1.21
VCP-205ENST00000479300 MXRA8Q9BRK3 442 aa7.52□□□□□ -1.21
VCP-205ENST00000479300 LARP6Q9BRS8 491 aaKnown RBP7.52□□□□□ -1.21
VCP-205ENST00000479300 ENTPD7Q9NQZ7 604 aa7.52□□□□□ -1.21
VCP-205ENST00000479300 C1orf112Q9NSG2 853 aa7.52□□□□□ -1.21
VCP-205ENST00000479300 TMEM161AQ9NX61 479 aa7.52□□□□□ -1.21
VCP-205ENST00000479300 BARHL2Q9NY43 387 aa7.52□□□□□ -1.21
VCP-205ENST00000479300 LIMD1Q9UGP4 676 aa7.52□□□□□ -1.21
VCP-205ENST00000479300 OTOGLQ3ZCN5 2332 aa7.52□□□□□ -1.21
VCP-205ENST00000479300 GPR179Q6PRD1 2367 aa7.52□□□□□ -1.21
VCP-205ENST00000479300 NFASCO94856 1347 aa7.52□□□□□ -1.21
VCP-205ENST00000479300 CNTNAP5Q8WYK1 1306 aa7.52□□□□□ -1.21
VCP-205ENST00000479300 CPLX1O14810 134 aa7.51□□□□□ -1.21
VCP-205ENST00000479300 BACH1O14867 736 aa7.51□□□□□ -1.21
VCP-205ENST00000479300 ADAMTS3O15072 1205 aa7.51□□□□□ -1.21
VCP-205ENST00000479300 DHX15O43143 795 aaKnown RBP7.51□□□□□ -1.21
VCP-205ENST00000479300 VTNP04004 478 aa7.51□□□□□ -1.21
VCP-205ENST00000479300 EPCAMP16422 314 aa7.51□□□□□ -1.21
VCP-205ENST00000479300 RPS6KB1P23443 525 aa7.51□□□□□ -1.21
VCP-205ENST00000479300 HSPA4P34932 840 aa7.51□□□□□ -1.21
VCP-205ENST00000479300 CLCN5P51795 746 aa7.51□□□□□ -1.21
VCP-205ENST00000479300 ADCK5Q3MIX3 580 aa7.51□□□□□ -1.21
VCP-205ENST00000479300 RARS2Q5T160 578 aaKnown RBP7.51□□□□□ -1.21
VCP-205ENST00000479300 ABHD15Q6UXT9 468 aa7.51□□□□□ -1.21
VCP-205ENST00000479300 ZDHHC14Q8IZN3 488 aa7.51□□□□□ -1.21
VCP-205ENST00000479300 LINC01465Q8N7H1 131 aa7.51□□□□□ -1.21
VCP-205ENST00000479300 RMDN1Q96DB5 314 aa7.51□□□□□ -1.21
VCP-205ENST00000479300 VN1R3Q9BXE9 311 aa7.51□□□□□ -1.21
VCP-205ENST00000479300 ANO3Q9BYT9 981 aa7.51□□□□□ -1.21
VCP-205ENST00000479300 TMEM117Q9H0C3 514 aa7.51□□□□□ -1.21
VCP-205ENST00000479300 ADAMTS10Q9H324 1103 aa7.51□□□□□ -1.21
VCP-205ENST00000479300 ELAC1Q9H777 363 aaKnown RBP7.51□□□□□ -1.21
VCP-205ENST00000479300 ATP6V0A4Q9HBG4 840 aa7.51□□□□□ -1.21
VCP-205ENST00000479300 AGO4Q9HCK5 861 aaKnown RBP7.51□□□□□ -1.21
VCP-205ENST00000479300 NGRNQ9NPE2 291 aaKnown RBP7.51□□□□□ -1.21
VCP-205ENST00000479300 NR2E1Q9Y466 385 aa7.51□□□□□ -1.21
VCP-205ENST00000479300 SNX14Q9Y5W7 946 aa7.51□□□□□ -1.21
VCP-205ENST00000479300 CYP46A1Q9Y6A2 500 aa7.51□□□□□ -1.21
VCP-205ENST00000479300 CACNA1BQ00975 2339 aa7.5□□□□□ -1.21
VCP-205ENST00000479300 C2orf16Q68DN1 1984 aa7.5□□□□□ -1.21
VCP-205ENST00000479300 TTLL13PA6NNM8 815 aa7.5□□□□□ -1.21
VCP-205ENST00000479300 NT5C1B-RDH14C9J2C7 533 aa7.5□□□□□ -1.21
VCP-205ENST00000479300 MEIS1O00470 390 aa7.5□□□□□ -1.21
VCP-205ENST00000479300 PRPF3O43395 683 aaKnown RBP7.5□□□□□ -1.21
VCP-205ENST00000479300 EPB41L2O43491 1005 aaKnown RBP7.5□□□□□ -1.21
VCP-205ENST00000479300 B4GALT3O60512 393 aa7.5□□□□□ -1.21
VCP-205ENST00000479300 N4BP1O75113 896 aaKnown RBP7.5□□□□□ -1.21
VCP-205ENST00000479300 CPA1P15085 419 aa7.5□□□□□ -1.21
VCP-205ENST00000479300 AOC1P19801 751 aa7.5□□□□□ -1.21
VCP-205ENST00000479300 ADD1P35611 737 aaKnown RBP7.5□□□□□ -1.21
VCP-205ENST00000479300 SLC26A2P50443 739 aa7.5□□□□□ -1.21
VCP-205ENST00000479300 CRYBB1P53674 252 aaPredicted RBP7.5□□□□□ -1.21
VCP-205ENST00000479300 ITIH3Q06033 890 aa7.5□□□□□ -1.21
VCP-205ENST00000479300 SSRP1Q08945 709 aaKnown RBP7.5□□□□□ -1.21
VCP-205ENST00000479300 PFKFB3Q16875 520 aaPredicted RBP7.5□□□□□ -1.21
VCP-205ENST00000479300 CEP55Q53EZ4 464 aa7.5□□□□□ -1.21
VCP-205ENST00000479300 ODR4Q5SWX8 454 aa7.5□□□□□ -1.21
VCP-205ENST00000479300 JAKMIP3Q5VZ66 844 aa7.5□□□□□ -1.21
VCP-205ENST00000479300 KIAA1841Q6NSI8 718 aa7.5□□□□□ -1.21
VCP-205ENST00000479300 MIS18BP1Q6P0N0 1132 aa7.5□□□□□ -1.21
VCP-205ENST00000479300 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.5□□□□□ -1.21
VCP-205ENST00000479300 NIPA1Q7RTP0 329 aa7.5□□□□□ -1.21
VCP-205ENST00000479300 TMC7Q7Z402 723 aa7.5□□□□□ -1.21
VCP-205ENST00000479300 ZNF598Q86UK7 904 aaKnown RBP7.5□□□□□ -1.21
VCP-205ENST00000479300 PLA2G4DQ86XP0 818 aa7.5□□□□□ -1.21
VCP-205ENST00000479300 ECHDC2Q86YB7 292 aa7.5□□□□□ -1.21
VCP-205ENST00000479300 CKAP2LQ8IYA6 745 aa7.5□□□□□ -1.21
VCP-205ENST00000479300 CCDC105Q8IYK2 499 aa7.5□□□□□ -1.21
VCP-205ENST00000479300 REXO1Q8N1G1 1221 aaKnown RBP7.5□□□□□ -1.21
VCP-205ENST00000479300 SLC22A17Q8WUG5 538 aa7.5□□□□□ -1.21
VCP-205ENST00000479300 CASP10Q92851 521 aa7.5□□□□□ -1.21
VCP-205ENST00000479300 ZNF668Q96K58 619 aaPredicted RBP7.5□□□□□ -1.21
VCP-205ENST00000479300 ZNF558Q96NG5 402 aa7.5□□□□□ -1.21
VCP-205ENST00000479300 NECTIN4Q96NY8 510 aa7.5□□□□□ -1.21
VCP-205ENST00000479300 SLC26A6Q9BXS9 759 aa7.5□□□□□ -1.21
VCP-205ENST00000479300 BMP2KQ9NSY1 1161 aaPredicted RBP7.5□□□□□ -1.21
VCP-205ENST00000479300 SPG21Q9NZD8 308 aa7.5□□□□□ -1.21
VCP-205ENST00000479300 COL1A2P08123 1366 aa7.49□□□□□ -1.21
VCP-205ENST00000479300 ESYT2A0FGR8 921 aa7.49□□□□□ -1.21
VCP-205ENST00000479300 FAM86B1E9PN63 330 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms