RNA–Protein interactions for RNA: ENST00000478979.5

CCDC78-210, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,054 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-210ENST00000478979 KDM4CQ9H3R0 1056 aa15.31■□□□□ 0.04
CCDC78-210ENST00000478979 EBF2Q9HAK2 575 aa15.31■□□□□ 0.04
CCDC78-210ENST00000478979 RNF14Q9UBS8 474 aa15.31■□□□□ 0.04
CCDC78-210ENST00000478979 XRCC5P13010 732 aaKnown RBP15.3■□□□□ 0.04
CCDC78-210ENST00000478979 STRIP1Q5VSL9 837 aa15.3■□□□□ 0.04
CCDC78-210ENST00000478979 TCP11Q8WWU5 503 aa15.3■□□□□ 0.04
CCDC78-210ENST00000478979 P3H4Q92791 437 aa15.3■□□□□ 0.04
CCDC78-210ENST00000478979 GLIS2Q9BZE0 524 aaPredicted RBP15.3■□□□□ 0.04
CCDC78-210ENST00000478979 TAF1DQ9H5J8 278 aaPredicted RBP15.3■□□□□ 0.04
CCDC78-210ENST00000478979 SEPT11Q9NVA2 429 aaKnown RBP15.3■□□□□ 0.04
CCDC78-210ENST00000478979 TSKSQ9UJT2 592 aa15.3■□□□□ 0.04
CCDC78-210ENST00000478979 PJA2O43164 708 aa15.3■□□□□ 0.04
CCDC78-210ENST00000478979 GHRP10912 638 aa15.3■□□□□ 0.04
CCDC78-210ENST00000478979 EXOC3L4Q17RC7 722 aa15.3■□□□□ 0.04
CCDC78-210ENST00000478979 TAX1BP1Q86VP1 789 aa15.3■□□□□ 0.04
CCDC78-210ENST00000478979 WDR18Q9BV38 432 aa15.3■□□□□ 0.04
CCDC78-210ENST00000478979 NOVA2Q9UNW9 492 aaKnown RBP15.3■□□□□ 0.04
CCDC78-210ENST00000478979 L3MBTL1Q9Y468 752 aa15.3■□□□□ 0.04
CCDC78-210ENST00000478979 DCDC2CA8MYV0 355 aa15.3■□□□□ 0.04
CCDC78-210ENST00000478979 RPA1P27694 616 aa15.3■□□□□ 0.04
CCDC78-210ENST00000478979 ERVK-9P63128 1117 aa15.3■□□□□ 0.04
CCDC78-210ENST00000478979 DGKZQ13574 1117 aa15.3■□□□□ 0.04
CCDC78-210ENST00000478979 ARMC9Q7Z3E5 817 aa15.3■□□□□ 0.04
CCDC78-210ENST00000478979 HOMER2Q9NSB8 354 aa15.3■□□□□ 0.04
CCDC78-210ENST00000478979 SPATS2LQ9NUQ6 558 aaKnown RBP15.3■□□□□ 0.04
CCDC78-210ENST00000478979 FAM13AO94988 1023 aa15.29■□□□□ 0.04
CCDC78-210ENST00000478979 NR3C1P04150 777 aa15.29■□□□□ 0.04
CCDC78-210ENST00000478979 PAEPP09466 180 aa15.29■□□□□ 0.04
CCDC78-210ENST00000478979 CLTAP09496 248 aa15.29■□□□□ 0.04
CCDC78-210ENST00000478979 DRD4P21917 467 aa15.29■□□□□ 0.04
CCDC78-210ENST00000478979 SF3A3Q12874 501 aaKnown RBP eCLIP15.29■□□□□ 0.04
CCDC78-210ENST00000478979 BIRC3Q13489 604 aa15.29■□□□□ 0.04
CCDC78-210ENST00000478979 HYIQ5T013 277 aa15.29■□□□□ 0.04
CCDC78-210ENST00000478979 BZW1Q7L1Q6 419 aaKnown RBP15.29■□□□□ 0.04
CCDC78-210ENST00000478979 ZNF571Q7Z3V5 609 aaPredicted RBP15.29■□□□□ 0.04
CCDC78-210ENST00000478979 CEP63Q96MT8 703 aa15.29■□□□□ 0.04
CCDC78-210ENST00000478979 BATF3Q9NR55 127 aa15.29■□□□□ 0.04
CCDC78-210ENST00000478979 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.29■□□□□ 0.04
CCDC78-210ENST00000478979 GCNT4Q9P109 453 aa15.29■□□□□ 0.04
CCDC78-210ENST00000478979 C15orf41Q9Y2V0 281 aa15.29■□□□□ 0.04
CCDC78-210ENST00000478979 KCNK3O14649 394 aa15.29■□□□□ 0.04
CCDC78-210ENST00000478979 GFPT2O94808 682 aa15.29■□□□□ 0.04
CCDC78-210ENST00000478979 TRIM49P0CI25 452 aa15.29■□□□□ 0.04
CCDC78-210ENST00000478979 TRIM49CP0CI26 452 aa15.29■□□□□ 0.04
CCDC78-210ENST00000478979 UCHL3P15374 230 aa15.29■□□□□ 0.04
CCDC78-210ENST00000478979 ECHS1P30084 290 aa15.29■□□□□ 0.04
CCDC78-210ENST00000478979 CDC25CP30307 473 aa15.29■□□□□ 0.04
CCDC78-210ENST00000478979 AP3B2Q13367 1082 aa15.29■□□□□ 0.04
CCDC78-210ENST00000478979 RUFY4Q6ZNE9 571 aa15.29■□□□□ 0.04
CCDC78-210ENST00000478979 PNMA8AQ86V59 439 aaPredicted RBP15.29■□□□□ 0.04
CCDC78-210ENST00000478979 SYT2Q8N9I0 419 aaPredicted RBP15.29■□□□□ 0.04
CCDC78-210ENST00000478979 MKL1Q969V6 931 aa15.29■□□□□ 0.04
CCDC78-210ENST00000478979 TRPC6Q9Y210 931 aa15.29■□□□□ 0.04
CCDC78-210ENST00000478979 LTBP1Q14766 1721 aa15.28■□□□□ 0.04
CCDC78-210ENST00000478979 YDJCA8MPS7 323 aa15.28■□□□□ 0.04
CCDC78-210ENST00000478979 ANP32DO95626 131 aa15.28■□□□□ 0.04
CCDC78-210ENST00000478979 AFPP02771 609 aaKnown RBP15.28■□□□□ 0.04
CCDC78-210ENST00000478979 STAT2P52630 851 aa15.28■□□□□ 0.04
CCDC78-210ENST00000478979 MAGOHP61326 146 aaKnown RBP15.28■□□□□ 0.04
CCDC78-210ENST00000478979 SLC18A3Q16572 532 aa15.28■□□□□ 0.04
CCDC78-210ENST00000478979 CDCA2Q69YH5 1023 aaPredicted RBP15.28■□□□□ 0.04
CCDC78-210ENST00000478979 TATDN1Q6P1N9 297 aa15.28■□□□□ 0.04
CCDC78-210ENST00000478979 DDX42Q86XP3 938 aaKnown RBP eCLIP15.28■□□□□ 0.04
CCDC78-210ENST00000478979 CCDC63Q8NA47 563 aa15.28■□□□□ 0.04
CCDC78-210ENST00000478979 RBM46Q8TBY0 533 aaKnown RBP15.28■□□□□ 0.04
CCDC78-210ENST00000478979 MAGOHBQ96A72 148 aaKnown RBP15.28■□□□□ 0.04
CCDC78-210ENST00000478979 ISCUQ9H1K1 167 aa15.28■□□□□ 0.04
CCDC78-210ENST00000478979 ABCB11O95342 1321 aa15.28■□□□□ 0.04
CCDC78-210ENST00000478979 PON1P27169 355 aa15.28■□□□□ 0.04
CCDC78-210ENST00000478979 UBLCP1Q8WVY7 318 aaPredicted RBP15.28■□□□□ 0.04
CCDC78-210ENST00000478979 INPP4AQ96PE3 977 aaPredicted RBP15.28■□□□□ 0.04
CCDC78-210ENST00000478979 AP1M1Q9BXS5 423 aa15.28■□□□□ 0.04
CCDC78-210ENST00000478979 GANQ9H2C0 597 aa15.28■□□□□ 0.04
CCDC78-210ENST00000478979 ASTN1O14525 1302 aa15.28■□□□□ 0.04
CCDC78-210ENST00000478979 MYO3BQ8WXR4 1341 aa15.28■□□□□ 0.04
CCDC78-210ENST00000478979 KLHL33A6NCF5 533 aa15.28■□□□□ 0.04
CCDC78-210ENST00000478979 CCT8L1PA6NM43 557 aa15.28■□□□□ 0.04
CCDC78-210ENST00000478979 ABCB4P21439 1286 aa15.28■□□□□ 0.04
CCDC78-210ENST00000478979 SREBF1P36956 1147 aa15.28■□□□□ 0.04
CCDC78-210ENST00000478979 RNF10Q8N5U6 811 aaKnown RBP15.28■□□□□ 0.04
CCDC78-210ENST00000478979 IDI2Q9BXS1 227 aa15.28■□□□□ 0.04
CCDC78-210ENST00000478979 TMEM39BQ9GZU3 492 aa15.28■□□□□ 0.04
CCDC78-210ENST00000478979 VAV3Q9UKW4 847 aa15.28■□□□□ 0.04
CCDC78-210ENST00000478979 SLX4Q8IY92 1834 aa15.27■□□□□ 0.04
CCDC78-210ENST00000478979 SSU72P8A0A1W2PR75 194 aa15.27■□□□□ 0.04
CCDC78-210ENST00000478979 GRID2IPA4D2P6 1211 aa15.27■□□□□ 0.04
CCDC78-210ENST00000478979 TISP43B9A030 160 aa15.27■□□□□ 0.04
CCDC78-210ENST00000478979 GNA14O95837 355 aa15.27■□□□□ 0.04
CCDC78-210ENST00000478979 TNNC1P63316 161 aa15.27■□□□□ 0.04
CCDC78-210ENST00000478979 ARHGAP44Q17R89 818 aa15.27■□□□□ 0.04
CCDC78-210ENST00000478979 RINT1Q6NUQ1 792 aa15.27■□□□□ 0.04
CCDC78-210ENST00000478979 ADAT2Q7Z6V5 191 aaKnown RBP15.27■□□□□ 0.04
CCDC78-210ENST00000478979 CPXCR1Q8N123 301 aa15.27■□□□□ 0.04
CCDC78-210ENST00000478979 LRRC45Q96CN5 670 aa15.27■□□□□ 0.04
CCDC78-210ENST00000478979 NAP1L4Q99733 375 aaKnown RBP15.27■□□□□ 0.04
CCDC78-210ENST00000478979 PDGFDQ9GZP0 370 aaPredicted RBP15.27■□□□□ 0.04
CCDC78-210ENST00000478979 NEUROG2Q9H2A3 272 aa15.27■□□□□ 0.04
CCDC78-210ENST00000478979 WRAP73Q9P2S5 460 aaPredicted RBP15.27■□□□□ 0.04
CCDC78-210ENST00000478979 CYP3A7-CYP3A51PA0A087WV96 503 aa15.27■□□□□ 0.03
CCDC78-210ENST00000478979 GAS7O60861 476 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms